|
Name |
Accession |
Description |
Interval |
E-value |
| TPR |
COG0457 |
Tetratricopeptide (TPR) repeat [General function prediction only]; |
902-1084 |
9.58e-22 |
|
Tetratricopeptide (TPR) repeat [General function prediction only];
Pssm-ID: 440225 [Multi-domain] Cd Length: 245 Bit Score: 95.84 E-value: 9.58e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958785764 902 AFAYCRRGAIYRKLGKLQSAMNDLQETIFVEPLFLNAYWHRHFIYLFQDKINDALDDLNFITKYNKNHAEAYLSKAEIFR 981
Cdd:COG0457 8 AEAYNNLGLAYRRLGRYEEAIEDYEKALELDPDDAEALYNLGLAYLRLGRYEEALADYEQALELDPDDAEALNNLGLALQ 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958785764 982 EKNDITLAILNYSQAIKCRPKDASLYFKRGEMYEKTNKV-LAIDDFSKCIYYDPKRSDALWKRGMFYFENENWTGAVYDF 1060
Cdd:COG0457 88 ALGRYEEALEDYDKALELDPDDAEALYNLGLALLELGRYdEAIEAYERALELDPDDADALYNLGIALEKLGRYEEALELL 167
|
170 180
....*....|....*....|....
gi 1958785764 1061 TSLLKLEPHNSQASYDPSFNEHYI 1084
Cdd:COG0457 168 EKLEAAALAALLAAALGEAALALA 191
|
|
| TPR |
COG0457 |
Tetratricopeptide (TPR) repeat [General function prediction only]; |
964-1175 |
8.08e-18 |
|
Tetratricopeptide (TPR) repeat [General function prediction only];
Pssm-ID: 440225 [Multi-domain] Cd Length: 245 Bit Score: 84.29 E-value: 8.08e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958785764 964 KYNKNHAEAYLSKAEIFREKNDITLAILNYSQAIKCRPKDASLYFKRGEMYEKTNKV-LAIDDFSKCIYYDPKRSDALWK 1042
Cdd:COG0457 2 ELDPDDAEAYNNLGLAYRRLGRYEEAIEDYEKALELDPDDAEALYNLGLAYLRLGRYeEALADYEQALELDPDDAEALNN 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958785764 1043 RGMFYFENENWTGAVYDFTSLLKLEPHNSQASYdpsfnehyispgnllpgtkmwsilsscdfflqtefkskskqssimik 1122
Cdd:COG0457 82 LGLALQALGRYEEALEDYDKALELDPDDAEALY----------------------------------------------- 114
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 1958785764 1123 tNRGRAYFKRNLFKQATEDFSAAIHSDPNNWLALYYRACLFRKCS-PQRALQDY 1175
Cdd:COG0457 115 -NLGLALLELGRYDEAIEAYERALELDPDDADALYNLGIALEKLGrYEEALELL 167
|
|
| TPR |
COG0457 |
Tetratricopeptide (TPR) repeat [General function prediction only]; |
878-1041 |
6.42e-17 |
|
Tetratricopeptide (TPR) repeat [General function prediction only];
Pssm-ID: 440225 [Multi-domain] Cd Length: 245 Bit Score: 81.98 E-value: 6.42e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958785764 878 EVIKYYESELELltqeikseKKNPAFAYCRRGAIYRKLGKLQSAMNDLQETIFVEPLFLNAYWHRHFIYLFQDKINDALD 957
Cdd:COG0457 26 EAIEDYEKALEL--------DPDDAEALYNLGLAYLRLGRYEEALADYEQALELDPDDAEALNNLGLALQALGRYEEALE 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958785764 958 DLNFITKYNKNHAEAYLSKAEIFREKNDITLAILNYSQAIKCRPKDASLYFKRGEMYEKTNKVL-AIDDFSKCIYYDPKR 1036
Cdd:COG0457 98 DYDKALELDPDDAEALYNLGLALLELGRYDEAIEAYERALELDPDDADALYNLGIALEKLGRYEeALELLEKLEAAALAA 177
|
....*
gi 1958785764 1037 SDALW 1041
Cdd:COG0457 178 LLAAA 182
|
|
| NlpI |
COG4785 |
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis]; |
950-1175 |
1.13e-15 |
|
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 443815 [Multi-domain] Cd Length: 223 Bit Score: 77.65 E-value: 1.13e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958785764 950 DKINDALDDLNFITKYNKNHAEAYLSKAEIFREKNDITLAILNYSQAIKCrPKDASLYFKRGEMYEKTNKV-LAIDDFSK 1028
Cdd:COG4785 20 SKAAILLAALLFAAVLALAIALADLALALAAAALAAAALAAERIDRALAL-PDLAQLYYERGVAYDSLGDYdLAIADFDQ 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958785764 1029 CIYYDPKRSDALWKRGMFYFENENWTGAVYDFTSLLKLEPHNSQAsydpsfnehyispgnllpgtkMWsilsscdfflqt 1108
Cdd:COG4785 99 ALELDPDLAEAYNNRGLAYLLLGDYDAALEDFDRALELDPDYAYA---------------------YL------------ 145
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1958785764 1109 efkskskqssimiktNRGRAYFKRNLFKQATEDFSAAIHSDPNNWLALYYRACLFRKCSPQRALQDY 1175
Cdd:COG4785 146 ---------------NRGIALYYLGRYELAIADLEKALELDPNDPERALWLYLAERKLDPEKALALL 197
|
|
| LapB |
COG2956 |
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal ... |
883-1072 |
4.46e-15 |
|
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal metal-binding domain [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442196 [Multi-domain] Cd Length: 275 Bit Score: 77.08 E-value: 4.46e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958785764 883 YESELELLTQEIKSEKKNpAFAYCRRGAIYRKLGKLQSAMNDLQETIFVEPLFLNAYWHRHFIYLFQDKINDALDDLNFI 962
Cdd:COG2956 58 YDRAIRIHQKLLERDPDR-AEALLELAQDYLKAGLLDRAEELLEKLLELDPDDAEALRLLAEIYEQEGDWEKAIEVLERL 136
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958785764 963 TKYNKNHAEAYLSKAEIFREKNDITLAILNYSQAIKCRPKDASLYFKRGEMYEKTNKV-LAIDDFSKCIYYDPKRSDALW 1041
Cdd:COG2956 137 LKLGPENAHAYCELAELYLEQGDYDEAIEALEKALKLDPDCARALLLLAELYLEQGDYeEAIAALERALEQDPDYLPALP 216
|
170 180 190
....*....|....*....|....*....|.
gi 1958785764 1042 KRGMFYFENENWTGAVYDFTSLLKLEPHNSQ 1072
Cdd:COG2956 217 RLAELYEKLGDPEEALELLRKALELDPSDDL 247
|
|
| TPR |
COG0457 |
Tetratricopeptide (TPR) repeat [General function prediction only]; |
1123-1269 |
1.14e-14 |
|
Tetratricopeptide (TPR) repeat [General function prediction only];
Pssm-ID: 440225 [Multi-domain] Cd Length: 245 Bit Score: 75.04 E-value: 1.14e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958785764 1123 TNRGRAYFKRNLFKQATEDFSAAIHSDPNNWLALYYRA-CLFRKCSPQRALQDYSVSVLINDgyDNLNCFLHRGILYTEL 1201
Cdd:COG0457 12 NNLGLAYRRLGRYEEAIEDYEKALELDPDDAEALYNLGlAYLRLGRYEEALADYEQALELDP--DDAEALNNLGLALQAL 89
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1958785764 1202 KFWMLAVCDFETVVTLERTATLAYINIGLIYLQhLDNYTEAFWWFTEAIRVDPLYIQSYICRAETYSK 1269
Cdd:COG0457 90 GRYEEALEDYDKALELDPDDAEALYNLGLALLE-LGRYDEAIEAYERALELDPDDADALYNLGIALEK 156
|
|
| LapB |
COG2956 |
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal ... |
887-1073 |
1.82e-14 |
|
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal metal-binding domain [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442196 [Multi-domain] Cd Length: 275 Bit Score: 75.15 E-value: 1.82e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958785764 887 LELLTQEIKSEKKNPAfAYCRRGAIYRKLGKLQSAMNDLQETIFVEPLFLNAYWHRHFIYLFQDKINDALDDLNFITKYN 966
Cdd:COG2956 28 IDLLEEALELDPETVE-AHLALGNLYRRRGEYDRAIRIHQKLLERDPDRAEALLELAQDYLKAGLLDRAEELLEKLLELD 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958785764 967 KNHAEAYLSKAEIFREKNDITLAILNYSQAIKCRPKDASLYFKRGEMYEKTNKV-LAIDDFSKCIYYDPKRSDALWKRGM 1045
Cdd:COG2956 107 PDDAEALRLLAEIYEQEGDWEKAIEVLERLLKLGPENAHAYCELAELYLEQGDYdEAIEALEKALKLDPDCARALLLLAE 186
|
170 180
....*....|....*....|....*...
gi 1958785764 1046 FYFENENWTGAVYDFTSLLKLEPHNSQA 1073
Cdd:COG2956 187 LYLEQGDYEEAIAALERALEQDPDYLPA 214
|
|
| LapB |
COG2956 |
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal ... |
945-1175 |
3.25e-14 |
|
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal metal-binding domain [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442196 [Multi-domain] Cd Length: 275 Bit Score: 74.38 E-value: 3.25e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958785764 945 IYLFQDKINDALDDLNFITKYNKNHAEAYLSKAEIFREKNDITLAILNYSQAIKCRPKDASLYFKRGEMYEKTNKV-LAI 1023
Cdd:COG2956 17 NYLLNGQPDKAIDLLEEALELDPETVEAHLALGNLYRRRGEYDRAIRIHQKLLERDPDRAEALLELAQDYLKAGLLdRAE 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958785764 1024 DDFSKCIYYDPKRSDALWKRGMFYFENENWTGAVYDFTSLLKLEPHNSQASYDpsFNEHYISPGNLLPGTKMWSILSSCD 1103
Cdd:COG2956 97 ELLEKLLELDPDDAEALRLLAEIYEQEGDWEKAIEVLERLLKLGPENAHAYCE--LAELYLEQGDYDEAIEALEKALKLD 174
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1958785764 1104 fflqtefkskskQSSIMIKTNRGRAYFKRNLFKQATEDFSAAIHSDPNNWLALYYRACLFRKCS-PQRALQDY 1175
Cdd:COG2956 175 ------------PDCARALLLLAELYLEQGDYEEAIAALERALEQDPDYLPALPRLAELYEKLGdPEEALELL 235
|
|
| TPR |
COG0457 |
Tetratricopeptide (TPR) repeat [General function prediction only]; |
997-1267 |
8.53e-14 |
|
Tetratricopeptide (TPR) repeat [General function prediction only];
Pssm-ID: 440225 [Multi-domain] Cd Length: 245 Bit Score: 72.73 E-value: 8.53e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958785764 997 IKCRPKDASLYFKRGEMYEKTNKV-LAIDDFSKCIYYDPKRSDALWKRGMFYFENENWTGAVYDFTSLLKLEPHNSQASY 1075
Cdd:COG0457 1 LELDPDDAEAYNNLGLAYRRLGRYeEAIEDYEKALELDPDDAEALYNLGLAYLRLGRYEEALADYEQALELDPDDAEALN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958785764 1076 dpsfnehyispgnllpgtkmwsilsscdfflqtefkskskqssimiktNRGRAYFKRNLFKQATEDFSAAIHSDPNNWLA 1155
Cdd:COG0457 81 ------------------------------------------------NLGLALQALGRYEEALEDYDKALELDPDDAEA 112
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958785764 1156 LYYRA-CLFRKCSPQRALQDYSVSVLINDgyDNLNCFLHRGILYTELKFWMLAVCDFEtvvTLERTATLAYINIGLIYLQ 1234
Cdd:COG0457 113 LYNLGlALLELGRYDEAIEAYERALELDP--DDADALYNLGIALEKLGRYEEALELLE---KLEAAALAALLAAALGEAA 187
|
250 260 270
....*....|....*....|....*....|...
gi 1958785764 1235 HLDNYTEAFWWFTEAIRVDPLYIQSYICRAETY 1267
Cdd:COG0457 188 LALAAAEVLLALLLALEQALRKKLAILTLAALA 220
|
|
| Spy |
COG3914 |
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational ... |
887-1086 |
4.88e-13 |
|
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443119 [Multi-domain] Cd Length: 658 Bit Score: 73.49 E-value: 4.88e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958785764 887 LELLTQEIKSEKKNPAFAYCRRGAIYRKLGKLQSAMNDLQETIFVEPLFLNAYWHRHFIYLFQDKINDALDDLNFITKYN 966
Cdd:COG3914 63 AAGEAAAAAAALLLLAALLELAALLLQALGRYEEALALYRRALALNPDNAEALFNLGNLLLALGRLEEALAALRRALALN 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958785764 967 KNHAEAYLSKAEIFREKNDITLAILNYSQAIKCRPKDASLYFKRGEMYEKTNKV-LAIDDFSKCIYYDPKRSDALWKRGM 1045
Cdd:COG3914 143 PDFAEAYLNLGEALRRLGRLEEAIAALRRALELDPDNAEALNNLGNALQDLGRLeEAIAAYRRALELDPDNADAHSNLLF 222
|
170 180 190 200
....*....|....*....|....*....|....*....|.
gi 1958785764 1046 FYFENENWTGAVYDFTSLLKLEPHNSQASydpSFNEHYISP 1086
Cdd:COG3914 223 ALRQACDWEVYDRFEELLAALARGPSELS---PFALLYLPD 260
|
|
| NrfG |
COG4235 |
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, ... |
954-1073 |
2.18e-12 |
|
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443378 [Multi-domain] Cd Length: 131 Bit Score: 65.41 E-value: 2.18e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958785764 954 DALDDLNFITKYNKNHAEAYLSKAEIFREKNDITLAILNYSQAIKCRPKDASLYFKRGEMYEKTNKV-LAIDDFSKCIYY 1032
Cdd:COG4235 1 EAIARLRQALAANPNDAEGWLLLGRAYLRLGRYDEALAAYEKALRLDPDNADALLDLAEALLAAGDTeEAEELLERALAL 80
|
90 100 110 120
....*....|....*....|....*....|....*....|.
gi 1958785764 1033 DPKRSDALWKRGMFYFENENWTGAVYDFTSLLKLEPHNSQA 1073
Cdd:COG4235 81 DPDNPEALYLLGLAAFQQGDYAEAIAAWQKLLALLPADAPA 121
|
|
| BepA |
COG4783 |
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell ... |
945-1070 |
7.63e-12 |
|
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell wall/membrane/envelope biogenesis, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443813 [Multi-domain] Cd Length: 139 Bit Score: 64.06 E-value: 7.63e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958785764 945 IYLFQDKINDALDDLNFITKYNKNHAEAYLSKAEIFREKNDITLAILNYSQAIKCRPKDASLYFKRGEMYEKTNKV-LAI 1023
Cdd:COG4783 13 ALLLAGDYDEAEALLEKALELDPDNPEAFALLGEILLQLGDLDEAIVLLHEALELDPDEPEARLNLGLALLKAGDYdEAL 92
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 1958785764 1024 DDFSKCIYYDPKRSDALWKRGMFYFENENWTGAVYDFTSLLKLEPHN 1070
Cdd:COG4783 93 ALLEKALKLDPEHPEAYLRLARAYRALGRPDEAIAALEKALELDPDD 139
|
|
| NlpI |
COG4785 |
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis]; |
907-1086 |
7.85e-12 |
|
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 443815 [Multi-domain] Cd Length: 223 Bit Score: 66.48 E-value: 7.85e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958785764 907 RRGAIYRKLGKLQSAMNDLQETIFVEPLFLNAYWHRHFIYLFQDKINDALDDLNfITKYNKNHAEAYLSKAEIFREKNDI 986
Cdd:COG4785 11 ALALAAAAASKAAILLAALLFAAVLALAIALADLALALAAAALAAAALAAERID-RALALPDLAQLYYERGVAYDSLGDY 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958785764 987 TLAILNYSQAIKCRPKDASLYFKRGEMYEKTNKV-LAIDDFSKCIYYDPKRSDALWKRGMFYFENENWTGAVYDFTSLLK 1065
Cdd:COG4785 90 DLAIADFDQALELDPDLAEAYNNRGLAYLLLGDYdAALEDFDRALELDPDYAYAYLNRGIALYYLGRYELAIADLEKALE 169
|
170 180
....*....|....*....|.
gi 1958785764 1066 LEPHNSQASYDPSFNEHYISP 1086
Cdd:COG4785 170 LDPNDPERALWLYLAERKLDP 190
|
|
| BepA |
COG4783 |
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell ... |
902-1035 |
9.26e-12 |
|
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell wall/membrane/envelope biogenesis, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443813 [Multi-domain] Cd Length: 139 Bit Score: 64.06 E-value: 9.26e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958785764 902 AFAYCRRGAIYRKLGKLQSAMNDLQETIFVEPLFLNAYWHRHFIYLFQDKINDALDDLNFITKYNKNHAEAYLSKAEIFR 981
Cdd:COG4783 4 AEALYALAQALLLAGDYDEAEALLEKALELDPDNPEAFALLGEILLQLGDLDEAIVLLHEALELDPDEPEARLNLGLALL 83
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 1958785764 982 EKNDITLAILNYSQAIKCRPKDASLYFKRGEMYEKTNKV-LAIDDFSKCIYYDPK 1035
Cdd:COG4783 84 KAGDYDEALALLEKALKLDPEHPEAYLRLARAYRALGRPdEAIAALEKALELDPD 138
|
|
| Spy |
COG3914 |
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational ... |
865-1073 |
1.97e-11 |
|
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443119 [Multi-domain] Cd Length: 658 Bit Score: 68.48 E-value: 1.97e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958785764 865 LELTDYVKCNLPPEVIKYYESELELLTQEIKSEKKNPAFAYCRRGAIYRKLGKLQSAMNDLQETIFVEPLFLNAYWHRHF 944
Cdd:COG3914 7 LALAALAAAALLAAAAAAELALAAELEAAALAAALGLALLLLAALAEAAAAALLALAAGEAAAAAAALLLLAALLELAAL 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958785764 945 IYLFQDKINDALDDLNFITKYNKNHAEAYLSKAEIFREKNDITLAILNYSQAIKCRPKDASLYFKRGEMYEKTNKV-LAI 1023
Cdd:COG3914 87 LLQALGRYEEALALYRRALALNPDNAEALFNLGNLLLALGRLEEALAALRRALALNPDFAEAYLNLGEALRRLGRLeEAI 166
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 1958785764 1024 DDFSKCIYYDPKRSDALWKRGMFYFENENWTGAVYDFTSLLKLEPHNSQA 1073
Cdd:COG3914 167 AALRRALELDPDNAEALNNLGNALQDLGRLEEAIAAYRRALELDPDNADA 216
|
|
| BepA |
COG4783 |
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell ... |
883-1003 |
4.78e-11 |
|
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell wall/membrane/envelope biogenesis, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443813 [Multi-domain] Cd Length: 139 Bit Score: 61.75 E-value: 4.78e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958785764 883 YESELELLTQEIKSEKKNPAfAYCRRGAIYRKLGKLQSAMNDLQETIFVEPLFLNAYWHRHFIYLFQDKINDALDDLNFI 962
Cdd:COG4783 20 YDEAEALLEKALELDPDNPE-AFALLGEILLQLGDLDEAIVLLHEALELDPDEPEARLNLGLALLKAGDYDEALALLEKA 98
|
90 100 110 120
....*....|....*....|....*....|....*....|.
gi 1958785764 963 TKYNKNHAEAYLSKAEIFREKNDITLAILNYSQAIKCRPKD 1003
Cdd:COG4783 99 LKLDPEHPEAYLRLARAYRALGRPDEAIAALEKALELDPDD 139
|
|
| NlpI |
COG4785 |
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis]; |
902-1028 |
1.88e-10 |
|
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 443815 [Multi-domain] Cd Length: 223 Bit Score: 62.24 E-value: 1.88e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958785764 902 AFAYCRRGAIYRKLGKLQSAMNDLQETIFVEPLFLNAYWHRHFIYLFQDKINDALDDLNFITKYNKNHAEAYLSKAEIFR 981
Cdd:COG4785 73 AQLYYERGVAYDSLGDYDLAIADFDQALELDPDLAEAYNNRGLAYLLLGDYDAALEDFDRALELDPDYAYAYLNRGIALY 152
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 1958785764 982 EKNDITLAILNYSQAIKCRPKDASLYFKRGEMYEKTNKVLAIDDFSK 1028
Cdd:COG4785 153 YLGRYELAIADLEKALELDPNDPERALWLYLAERKLDPEKALALLLE 199
|
|
| LapB |
COG2956 |
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal ... |
902-1176 |
1.25e-09 |
|
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal metal-binding domain [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442196 [Multi-domain] Cd Length: 275 Bit Score: 60.51 E-value: 1.25e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958785764 902 AFAYCRRGAIYRKLGKLQSAMNDLQETIFVEPLFLNAYWHRHFIYLFQDKINDALDDLNFITKYNKNHAEAYLSKAEIFR 981
Cdd:COG2956 8 ALGWYFKGLNYLLNGQPDKAIDLLEEALELDPETVEAHLALGNLYRRRGEYDRAIRIHQKLLERDPDRAEALLELAQDYL 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958785764 982 EKNDITLAILNYSQAIKCRPKDASLYFKRGEMYEKTNKVL-AIDDFSKCIYYDPKRSDALWKRGMFYFENENWTGAVYDF 1060
Cdd:COG2956 88 KAGLLDRAEELLEKLLELDPDDAEALRLLAEIYEQEGDWEkAIEVLERLLKLGPENAHAYCELAELYLEQGDYDEAIEAL 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958785764 1061 TSLLKLEPHNSQASYdpSFNEHYISPGNLLPGTKMWsilsscdfflQTEFKSKSKQSSIMIKtnRGRAYFKRNLFKQATE 1140
Cdd:COG2956 168 EKALKLDPDCARALL--LLAELYLEQGDYEEAIAAL----------ERALEQDPDYLPALPR--LAELYEKLGDPEEALE 233
|
250 260 270
....*....|....*....|....*....|....*.
gi 1958785764 1141 DFSAAIHSDPNNWLALYYRACLFRKCSPQRALQDYS 1176
Cdd:COG2956 234 LLRKALELDPSDDLLLALADLLERKEGLEAALALLE 269
|
|
| LapB |
COG2956 |
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal ... |
973-1254 |
1.34e-09 |
|
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal metal-binding domain [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442196 [Multi-domain] Cd Length: 275 Bit Score: 60.51 E-value: 1.34e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958785764 973 YLSKAEIFREKNDITLAILNYSQAIKCRPKDASLYFKRGEMYEKTNKV-LAIDDFSKCIYYDPKRSDALWKRGMFYFENE 1051
Cdd:COG2956 11 WYFKGLNYLLNGQPDKAIDLLEEALELDPETVEAHLALGNLYRRRGEYdRAIRIHQKLLERDPDRAEALLELAQDYLKAG 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958785764 1052 NWTGAVYDFTSLLKLEPHNSQAsydpsfnehyispgnllpgtkmwsilsscdfflqtefkskskqssimiKTNRGRAYFK 1131
Cdd:COG2956 91 LLDRAEELLEKLLELDPDDAEA------------------------------------------------LRLLAEIYEQ 122
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958785764 1132 RNLFKQATEDFSAAIHSDPNNWLALYYRA-CLFRKCSPQRALQDYSVSVLINDgyDNLNCFLHRGILYTELKFWMLAVCD 1210
Cdd:COG2956 123 EGDWEKAIEVLERLLKLGPENAHAYCELAeLYLEQGDYDEAIEALEKALKLDP--DCARALLLLAELYLEQGDYEEAIAA 200
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 1958785764 1211 FETVVTLERTATLAYINIGLIYlQHLDNYTEAFWWFTEAIRVDP 1254
Cdd:COG2956 201 LERALEQDPDYLPALPRLAELY-EKLGDPEEALELLRKALELDP 243
|
|
| NlpI |
COG4785 |
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis]; |
1154-1267 |
1.51e-09 |
|
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 443815 [Multi-domain] Cd Length: 223 Bit Score: 59.54 E-value: 1.51e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958785764 1154 LALYYRACLFRKCSPQRALQDYSVSVLINDgyDNLNCFLHRGILYTELKFWMLAVCDFETVVTLERTATLAYINIGLIYL 1233
Cdd:COG4785 41 LADLALALAAAALAAAALAAERIDRALALP--DLAQLYYERGVAYDSLGDYDLAIADFDQALELDPDLAEAYNNRGLAYL 118
|
90 100 110
....*....|....*....|....*....|....
gi 1958785764 1234 QhLDNYTEAFWWFTEAIRVDPLYIQSYICRAETY 1267
Cdd:COG4785 119 L-LGDYDAALEDFDRALELDPDYAYAYLNRGIAL 151
|
|
| NlpI |
COG4785 |
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis]; |
1124-1234 |
2.85e-09 |
|
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 443815 [Multi-domain] Cd Length: 223 Bit Score: 58.77 E-value: 2.85e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958785764 1124 NRGRAYFKRNLFKQATEDFSAAIHSDPNNWLALYYRA-CLFRKCSPQRALQDYSVSVLINDGYDnlNCFLHRGILYTELK 1202
Cdd:COG4785 78 ERGVAYDSLGDYDLAIADFDQALELDPDLAEAYNNRGlAYLLLGDYDAALEDFDRALELDPDYA--YAYLNRGIALYYLG 155
|
90 100 110
....*....|....*....|....*....|..
gi 1958785764 1203 FWMLAVCDFETVVTLERTATLAYINIGLIYLQ 1234
Cdd:COG4785 156 RYELAIADLEKALELDPNDPERALWLYLAERK 187
|
|
| NlpI |
COG4785 |
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis]; |
1131-1278 |
6.42e-09 |
|
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 443815 [Multi-domain] Cd Length: 223 Bit Score: 57.62 E-value: 6.42e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958785764 1131 KRNLFKQATEDFSAAIHSDPNNWLALYYRACLFRKCS-PQRALQDYSVSVLINDgyDNLNCFLHRGILYTELKFWMLAVC 1209
Cdd:COG4785 51 AALAAAALAAERIDRALALPDLAQLYYERGVAYDSLGdYDLAIADFDQALELDP--DLAEAYNNRGLAYLLLGDYDAALE 128
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1958785764 1210 DFETVVTLERTATLAYINIGLIYLQhLDNYTEAFWWFTEAIRVDP----LYIQSYICRAETYSKRTVSSYDEE 1278
Cdd:COG4785 129 DFDRALELDPDYAYAYLNRGIALYY-LGRYELAIADLEKALELDPndpeRALWLYLAERKLDPEKALALLLED 200
|
|
| LapB |
COG2956 |
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal ... |
883-1019 |
4.92e-08 |
|
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal metal-binding domain [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442196 [Multi-domain] Cd Length: 275 Bit Score: 55.89 E-value: 4.92e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958785764 883 YESELELLTQEIKSEKKNpAFAYCRRGAIYRKLGKLQSAMNDLQETIFVEPLFLNAYWHRHFIYLFQDKINDALDDLNFI 962
Cdd:COG2956 126 WEKAIEVLERLLKLGPEN-AHAYCELAELYLEQGDYDEAIEALEKALKLDPDCARALLLLAELYLEQGDYEEAIAALERA 204
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 1958785764 963 TKYNKNHAEAYLSKAEIFREKNDITLAILNYSQAIKCRPkDASLYFKRGEMYEKTNK 1019
Cdd:COG2956 205 LEQDPDYLPALPRLAELYEKLGDPEEALELLRKALELDP-SDDLLLALADLLERKEG 260
|
|
| BepA |
COG4783 |
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell ... |
970-1075 |
5.79e-07 |
|
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell wall/membrane/envelope biogenesis, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443813 [Multi-domain] Cd Length: 139 Bit Score: 50.19 E-value: 5.79e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958785764 970 AEAYLSKAEIFREKNDITLAILNYSQAIKCRPKDASLYFKRGEMYEKTNKV-LAIDDFSKCIYYDPKRSDALWKRGMFYF 1048
Cdd:COG4783 4 AEALYALAQALLLAGDYDEAEALLEKALELDPDNPEAFALLGEILLQLGDLdEAIVLLHEALELDPDEPEARLNLGLALL 83
|
90 100
....*....|....*....|....*..
gi 1958785764 1049 ENENWTGAVYDFTSLLKLEPHNSQASY 1075
Cdd:COG4783 84 KAGDYDEALALLEKALKLDPEHPEAYL 110
|
|
| NrfG |
COG4235 |
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, ... |
989-1075 |
9.33e-07 |
|
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443378 [Multi-domain] Cd Length: 131 Bit Score: 49.23 E-value: 9.33e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958785764 989 AILNYSQAIKCRPKDASLYFKRGEMYEKTNKV-LAIDDFSKCIYYDPKRSDALWKRGMFYFENENWTGAVYDFTSLLKLE 1067
Cdd:COG4235 2 AIARLRQALAANPNDAEGWLLLGRAYLRLGRYdEALAAYEKALRLDPDNADALLDLAEALLAAGDTEEAEELLERALALD 81
|
....*...
gi 1958785764 1068 PHNSQASY 1075
Cdd:COG4235 82 PDNPEALY 89
|
|
| PEP_TPR_lipo |
TIGR02917 |
putative PEP-CTERM system TPR-repeat lipoprotein; This protein family occurs in strictly ... |
894-1234 |
1.65e-06 |
|
putative PEP-CTERM system TPR-repeat lipoprotein; This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator.
Pssm-ID: 274350 [Multi-domain] Cd Length: 899 Bit Score: 52.78 E-value: 1.65e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958785764 894 IKSEKKNPAfAYCRRGAIYRKLGKLQSAMNDLQETIFVEPLFLNAYWHRHFIYLFQDKINDALDDLNFITKYNKNHAEAY 973
Cdd:TIGR02917 458 EKKQPDNAS-LHNLLGAIYLGKGDLAKAREAFEKALSIEPDFFPAAANLARIDIQEGNPDDAIQRFEKVLTIDPKNLRAI 536
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958785764 974 LSKAEIFREKNDITLAILNYSQAIKCRPKDASLYFKRGEMYEKTN---KVLAIDDFSKCIYYDPKRsdALWKRGMFYFEN 1050
Cdd:TIGR02917 537 LALAGLYLRTGNEEEAVAWLEKAAELNPQEIEPALALAQYYLGKGqlkKALAILNEAADAAPDSPE--AWLMLGRAQLAA 614
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958785764 1051 ENWTGAVYDFTSLLKLEPHNSQA----SYDPSFNEHY------------ISPGNLLpgtkmwSILSSCDFFLQTEFKSKS 1114
Cdd:TIGR02917 615 GDLNKAVSSFKKLLALQPDSALAllllADAYAVMKNYakaitslkraleLKPDNTE------AQIGLAQLLLAAKRTESA 688
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958785764 1115 KQSSIMIKTNR----------GRAYFKRNLFKQATEDFSAAIHSDPNNWLALYYRACLFRKCSPQRALQDYSVSvlINDG 1184
Cdd:TIGR02917 689 KKIAKSLQKQHpkaalgfeleGDLYLRQKDYPAAIQAYRKALKRAPSSQNAIKLHRALLASGNTAEAVKTLEAW--LKTH 766
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 1958785764 1185 YDNLNCFLHRGILYTELKFWMLAVCDFETVVTLERTATLAYINIGLIYLQ 1234
Cdd:TIGR02917 767 PNDAVLRTALAELYLAQKDYDKAIKHYQTVVKKAPDNAVVLNNLAWLYLE 816
|
|
| TadD |
COG5010 |
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, ... |
933-1068 |
2.46e-06 |
|
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures];
Pssm-ID: 444034 [Multi-domain] Cd Length: 155 Bit Score: 48.80 E-value: 2.46e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958785764 933 PLFLNAYWHRHFIYLFQDKINDALDDLNFITKYNKNHAEAYLSKAEIFREKNDITLAILNYSQAIKCRPKDASLYFKRGE 1012
Cdd:COG5010 17 LTKLRTLVEKYEAALAGANNTKEDELAAAGRDKLAKAFAIESPSDNLYNKLGDFEESLALLEQALQLDPNNPELYYNLAL 96
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 1958785764 1013 MYEKTNKV-LAIDDFSKCIYYDPKRSDALWKRGMFYFENENWTGAVYDFTSLLKLEP 1068
Cdd:COG5010 97 LYSRSGDKdEAKEYYEKALALSPDNPNAYSNLAALLLSLGQDDEAKAALQRALGTSP 153
|
|
| LapB |
COG2956 |
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal ... |
1126-1270 |
5.68e-06 |
|
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal metal-binding domain [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442196 [Multi-domain] Cd Length: 275 Bit Score: 49.73 E-value: 5.68e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958785764 1126 GRAYFKRNLFKQATEDFSAAIHSDPNNWLALYYRACLFRKC-SPQRALQDYSVsvLINDGYDNLNCFLHRGILYTELKFW 1204
Cdd:COG2956 49 GNLYRRRGEYDRAIRIHQKLLERDPDRAEALLELAQDYLKAgLLDRAEELLEK--LLELDPDDAEALRLLAEIYEQEGDW 126
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1958785764 1205 MLAVCDFETVVTLERTATLAYINIGLIYLQhLDNYTEAFWWFTEAIRVDPLYIQSYICRAETYSKR 1270
Cdd:COG2956 127 EKAIEVLERLLKLGPENAHAYCELAELYLE-QGDYDEAIEALEKALKLDPDCARALLLLAELYLEQ 191
|
|
| TPR_11 |
pfam13414 |
TPR repeat; |
979-1016 |
8.65e-06 |
|
TPR repeat;
Pssm-ID: 315977 [Multi-domain] Cd Length: 42 Bit Score: 43.61 E-value: 8.65e-06
10 20 30
....*....|....*....|....*....|....*...
gi 1958785764 979 IFREKNDITLAILNYSQAIKCRPKDASLYFKRGEMYEK 1016
Cdd:pfam13414 3 AYYEQGKYEEAIEAYKKALKLDPDNPEAYYNLGLAYYK 40
|
|
| PilF |
COG3063 |
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures]; |
979-1068 |
1.27e-05 |
|
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures];
Pssm-ID: 442297 [Multi-domain] Cd Length: 94 Bit Score: 45.16 E-value: 1.27e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958785764 979 IFREKNDITLAILNYSQAIKCRPKDASLYFKRGEMYEKTNKVLAIDDFSKCIYYDPKRSDALWKRGMFYFENENWTGAVY 1058
Cdd:COG3063 1 LYLKLGDLEEAEEYYEKALELDPDNADALNNLGLLLLEQGRYDEAIALEKALKLDPNNAEALLNLAELLLELGDYDEALA 80
|
90
....*....|
gi 1958785764 1059 DFTSLLKLEP 1068
Cdd:COG3063 81 YLERALELDP 90
|
|
| PilF |
COG3063 |
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures]; |
911-1002 |
1.46e-05 |
|
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures];
Pssm-ID: 442297 [Multi-domain] Cd Length: 94 Bit Score: 44.78 E-value: 1.46e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958785764 911 IYRKLGKLQSAMNDLQETIFVEPLFLNAYWHRHFIYLFQDKINDALDdLNFITKYNKNHAEAYLSKAEIFREKNDITLAI 990
Cdd:COG3063 1 LYLKLGDLEEAEEYYEKALELDPDNADALNNLGLLLLEQGRYDEAIA-LEKALKLDPNNAEALLNLAELLLELGDYDEAL 79
|
90
....*....|..
gi 1958785764 991 LNYSQAIKCRPK 1002
Cdd:COG3063 80 AYLERALELDPS 91
|
|
| BepA |
COG4783 |
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell ... |
1125-1254 |
1.49e-05 |
|
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell wall/membrane/envelope biogenesis, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443813 [Multi-domain] Cd Length: 139 Bit Score: 45.95 E-value: 1.49e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958785764 1125 RGRAYFKRNLFKQATEDFSAAIHSDPNNWLALYYRA-CLFRKCSPQRALQDYSVSVLINDGYDNLNCFLhrGILYTELKF 1203
Cdd:COG4783 10 LAQALLLAGDYDEAEALLEKALELDPDNPEAFALLGeILLQLGDLDEAIVLLHEALELDPDEPEARLNL--GLALLKAGD 87
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 1958785764 1204 WMLAVCDFETVVTLERTATLAYINIGLIYLQhLDNYTEAFWWFTEAIRVDP 1254
Cdd:COG4783 88 YDEALALLEKALKLDPEHPEAYLRLARAYRA-LGRPDEAIAALEKALELDP 137
|
|
| TPR |
COG0457 |
Tetratricopeptide (TPR) repeat [General function prediction only]; |
1186-1270 |
1.84e-05 |
|
Tetratricopeptide (TPR) repeat [General function prediction only];
Pssm-ID: 440225 [Multi-domain] Cd Length: 245 Bit Score: 47.69 E-value: 1.84e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958785764 1186 DNLNCFLHRGILYTELKFWMLAVCDFETVVTLERTATLAYINIGLIYLQhLDNYTEAFWWFTEAIRVDPLYIQSYICRAE 1265
Cdd:COG0457 6 DDAEAYNNLGLAYRRLGRYEEAIEDYEKALELDPDDAEALYNLGLAYLR-LGRYEEALADYEQALELDPDDAEALNNLGL 84
|
....*
gi 1958785764 1266 TYSKR 1270
Cdd:COG0457 85 ALQAL 89
|
|
| PEP_TPR_lipo |
TIGR02917 |
putative PEP-CTERM system TPR-repeat lipoprotein; This protein family occurs in strictly ... |
883-1157 |
2.68e-05 |
|
putative PEP-CTERM system TPR-repeat lipoprotein; This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator.
Pssm-ID: 274350 [Multi-domain] Cd Length: 899 Bit Score: 48.54 E-value: 2.68e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958785764 883 YESELELLTQEIKSEKKNPAfAYCRRGAIYRKLGKLQSAMNDLQETIFVEPLFLNAYWHRHFIYLFQDKINDALDDLNFI 962
Cdd:TIGR02917 379 FEKAAEYLAKATELDPENAA-ARTQLGISKLSQGDPSEAIADLETAAQLDPELGRADLLLILSYLRSGQFDKALAAAKKL 457
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958785764 963 TKYNKNHAEAYLSKAEIFREKNDITLAILNYSQAIKCRPKDASLYFKRGEMYEKTNKV-LAIDDFSKCIYYDPKRSDALW 1041
Cdd:TIGR02917 458 EKKQPDNASLHNLLGAIYLGKGDLAKAREAFEKALSIEPDFFPAAANLARIDIQEGNPdDAIQRFEKVLTIDPKNLRAIL 537
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958785764 1042 KrgmfYFENENWTGAVYDFTSLL-KLEPHNSQAsYDPSFN--EHYISPGNLlpgTKMWSILSSCdfflqTEFKSKSKQSS 1118
Cdd:TIGR02917 538 A----LAGLYLRTGNEEEAVAWLeKAAELNPQE-IEPALAlaQYYLGKGQL---KKALAILNEA-----ADAAPDSPEAW 604
|
250 260 270
....*....|....*....|....*....|....*....
gi 1958785764 1119 IMIktnrGRAYFKRNLFKQATEDFSAAIHSDPNNWLALY 1157
Cdd:TIGR02917 605 LML----GRAQLAAGDLNKAVSSFKKLLALQPDSALALL 639
|
|
| TadD |
COG5010 |
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, ... |
875-1001 |
3.16e-05 |
|
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures];
Pssm-ID: 444034 [Multi-domain] Cd Length: 155 Bit Score: 45.72 E-value: 3.16e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958785764 875 LPPEVIKYYESELELLTQEIKSEKKNPAFAYCRRGAIYRKLGKLQSAMNDLQETIFVEPLFLNAYWHRHFIYLFQDKIND 954
Cdd:COG5010 27 YEAALAGANNTKEDELAAAGRDKLAKAFAIESPSDNLYNKLGDFEESLALLEQALQLDPNNPELYYNLALLYSRSGDKDE 106
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 1958785764 955 ALDDLNFITKYNKNHAEAYLSKAEIFREKNDITLAILNYSQAIKCRP 1001
Cdd:COG5010 107 AKEYYEKALALSPDNPNAYSNLAALLLSLGQDDEAKAALQRALGTSP 153
|
|
| PEP_TPR_lipo |
TIGR02917 |
putative PEP-CTERM system TPR-repeat lipoprotein; This protein family occurs in strictly ... |
883-1075 |
4.07e-05 |
|
putative PEP-CTERM system TPR-repeat lipoprotein; This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator.
Pssm-ID: 274350 [Multi-domain] Cd Length: 899 Bit Score: 48.16 E-value: 4.07e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958785764 883 YESELELLTQEIKSEKKNPAFAYCRRGAIYRKLGKLQSAMNDLQETIFVEPLFLNAYWHRHFIYLFQDKINDALDDLNFI 962
Cdd:TIGR02917 106 FQQVLDELPGKTLLDDEGAAELLALRGLAYLGLGQLELAQKSYEQALAIDPRSLYAKLGLAQLALAENRFDEARALIDEV 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958785764 963 TKYNKNHAEAYLSKAEIFREKNDITLAILNYSQAIKCRPKDASLYFKRGEMYEKTNKV-LAIDDFSKCIYYDPKRSDALW 1041
Cdd:TIGR02917 186 LTADPGNVDALLLKGDLLLSLGNIELALAAYRKAIALRPNNIAVLLALATILIEAGEFeEAEKHADALLKKAPNSPLAHY 265
|
170 180 190
....*....|....*....|....*....|....
gi 1958785764 1042 KRGMFYFENENWTGAVYDFTSLLKLEPHNSQASY 1075
Cdd:TIGR02917 266 LKALVDFQKKNYEDARETLQDALKSAPEYLPALL 299
|
|
| PEP_TPR_lipo |
TIGR02917 |
putative PEP-CTERM system TPR-repeat lipoprotein; This protein family occurs in strictly ... |
884-1182 |
1.19e-04 |
|
putative PEP-CTERM system TPR-repeat lipoprotein; This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator.
Pssm-ID: 274350 [Multi-domain] Cd Length: 899 Bit Score: 46.62 E-value: 1.19e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958785764 884 ESELELLtqeIKSEKKNPAFAYCRRGAIYRKlGKLQSAMNDLQETIFVEPLFLNAYWHRHFIYLFQDKINDALDDLNFIT 963
Cdd:TIGR02917 247 EKHADAL---LKKAPNSPLAHYLKALVDFQK-KNYEDARETLQDALKSAPEYLPALLLAGASEYQLGNLEQAYQYLNQIL 322
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958785764 964 KYNKNHAEAYLSKAEIFREKNDITLAILNYSQAIKCRPKDASLYFKRGEMYektnkvLAIDDFSKCIYY-------DPKR 1036
Cdd:TIGR02917 323 KYAPNSHQARRLLASIQLRLGRVDEAIATLSPALGLDPDDPAALSLLGEAY------LALGDFEKAAEYlakatelDPEN 396
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958785764 1037 SDALWKRGMFYFENENWTGAVYDFTSLLKLEPHNSQAsyDPSFNEHYISPGnllpgtKMWSILSSCDfflQTEFKSKSKQ 1116
Cdd:TIGR02917 397 AAARTQLGISKLSQGDPSEAIADLETAAQLDPELGRA--DLLLILSYLRSG------QFDKALAAAK---KLEKKQPDNA 465
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1958785764 1117 SSIMIktnRGRAYFKRNLFKQATEDFSAAIHSDPNNWLALYYRACLFRKC-SPQRALQDYSVSVLIN 1182
Cdd:TIGR02917 466 SLHNL---LGAIYLGKGDLAKAREAFEKALSIEPDFFPAAANLARIDIQEgNPDDAIQRFEKVLTID 529
|
|
| CpoB |
COG1729 |
Cell division protein CpoB, coordinates peptidoglycan biosynthesis and outer membrane ... |
944-1073 |
1.54e-04 |
|
Cell division protein CpoB, coordinates peptidoglycan biosynthesis and outer membrane constriction [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 441335 [Multi-domain] Cd Length: 113 Bit Score: 42.29 E-value: 1.54e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958785764 944 FIYLFQDKINDALDDL-NFITKY--NKNHAEAYLSKAEIFREKNDITLAILNYSQAIKCRPKDaslyfkrgemyektnkv 1020
Cdd:COG1729 1 KALLKAGDYDEAIAAFkAFLKRYpnSPLAPDALYWLGEAYYALGDYDEAAEAFEKLLKRYPDS----------------- 63
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 1958785764 1021 laiddfskciyydPKRSDALWKRGMFYFENENWTGAVYDFTSLLKLEPHNSQA 1073
Cdd:COG1729 64 -------------PKAPDALLKLGLSYLELGDYDKARATLEELIKKYPDSEAA 103
|
|
| 3a0801s09 |
TIGR00990 |
mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) ... |
878-1254 |
4.16e-04 |
|
mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) (mitochondrial import receptor for the ADP/ATP carrier) (translocase of outermembrane tom70); [Transport and binding proteins, Amino acids, peptides and amines]
Pssm-ID: 273380 [Multi-domain] Cd Length: 615 Bit Score: 44.59 E-value: 4.16e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958785764 878 EVIKYYESELELltqeikseKKNPAFaYCRRGAIYRKLGKLQSAMNDLQETIFVEPLFLNAYWHRHFIYLFQDKINDALD 957
Cdd:TIGR00990 145 KAIKLYSKAIEC--------KPDPVY-YSNRAACHNALGDWEKVVEDTTAALELDPDYSKALNRRANAYDGLGKYADALL 215
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958785764 958 DLN---FITKYNKNHAEAYL---------SKA-EIFREKND---ITLAILNYSQAIKCRPKDA----------------- 1004
Cdd:TIGR00990 216 DLTascIIDGFRNEQSAQAVerllkkfaeSKAkEILETKPEnlpSVTFVGNYLQSFRPKPRPAgledsneldeetgngql 295
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958785764 1005 -----SLYFKRGEMYEKT----NKVLAIDDFSkciyydPKRSDALWKRGMFYFENENWTGAVYDFTSLLKLephnsqasy 1075
Cdd:TIGR00990 296 qlglkSPESKADESYEEAarafEKALDLGKLG------EKEAIALNLRGTFKCLKGKHLEALADLSKSIEL--------- 360
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958785764 1076 DPSFNEHYIspgnllpgtKMWSIL------SSCDFFLQTEFKSKSKQSSIMIktNRGRAYFKRNLFKQATEDFSAAIHSD 1149
Cdd:TIGR00990 361 DPRVTQSYI---------KRASMNlelgdpDKAEEDFDKALKLNSEDPDIYY--HRAQLHFIKGEFAQAGKDYQKSIDLD 429
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958785764 1150 PNNWLA------LYYRACLFRKCSP--QRALQDYSVSVLINDGYDNLncflhrgiLYTELKFwMLAVCDFETVVTLERTA 1221
Cdd:TIGR00990 430 PDFIFShiqlgvTQYKEGSIASSMAtfRRCKKNFPEAPDVYNYYGEL--------LLDQNKF-DEAIEKFDTAIELEKET 500
|
410 420 430
....*....|....*....|....*....|....*....
gi 1958785764 1222 TLAYINI------GLIYLQHLDNYTEAFWWFTEAIRVDP 1254
Cdd:TIGR00990 501 KPMYMNVlplinkALALFQWKQDFIEAENLCEKALIIDP 539
|
|
| PTZ00449 |
PTZ00449 |
104 kDa microneme/rhoptry antigen; Provisional |
387-463 |
4.17e-04 |
|
104 kDa microneme/rhoptry antigen; Provisional
Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 44.68 E-value: 4.17e-04
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1958785764 387 PEDSGKPADTVLPTSDAKPTRRPTLDV-EPTGFMQIRGKEVKPTYKSTPAKPTKPRIPVRPEEDKkrIKKVPQPPSLP 463
Cdd:PTZ00449 588 PKDPEEPKKPKRPRSAQRPTRPKSPKLpELLDIPKSPKRPESPKSPKRPPPPQRPSSPERPEGPK--IIKSPKPPKSP 663
|
|
| NrfG |
COG4235 |
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, ... |
887-1013 |
6.13e-04 |
|
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443378 [Multi-domain] Cd Length: 131 Bit Score: 41.14 E-value: 6.13e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958785764 887 LELLTQEIKSEKKNPAfAYCRRGAIYRKLGKLQSAMNDLQETIFVEPLFLNAYWHRHFIYLFQDKINDALDDLNFITKYN 966
Cdd:COG4235 3 IARLRQALAANPNDAE-GWLLLGRAYLRLGRYDEALAAYEKALRLDPDNADALLDLAEALLAAGDTEEAEELLERALALD 81
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 1958785764 967 KNHAEAYLSKAEIFREKNDITLAILNYSQAIKCRPKDASLYFKRGEM 1013
Cdd:COG4235 82 PDNPEALYLLGLAAFQQGDYAEAIAAWQKLLALLPADAPARLLEASI 128
|
|
| TadD |
COG5010 |
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, ... |
1006-1076 |
1.10e-03 |
|
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures];
Pssm-ID: 444034 [Multi-domain] Cd Length: 155 Bit Score: 41.10 E-value: 1.10e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1958785764 1006 LYFKRGEMYEktnkvlAIDDFSKCIYYDPKRSDALWKRGMFYFENENWTGAVYDFTSLLKLEPHNSQASYD 1076
Cdd:COG5010 63 LYNKLGDFEE------SLALLEQALQLDPNNPELYYNLALLYSRSGDKDEAKEYYEKALALSPDNPNAYSN 127
|
|
| TadD |
COG5010 |
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, ... |
1127-1255 |
1.10e-03 |
|
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures];
Pssm-ID: 444034 [Multi-domain] Cd Length: 155 Bit Score: 41.10 E-value: 1.10e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958785764 1127 RAYFKRNLFKQATEDFSAAIHSDPNNWLALYYRA-CLFRKCSPQRALQDYsvsvlindgydnlncflhrgilytelkfwm 1205
Cdd:COG5010 62 NLYNKLGDFEESLALLEQALQLDPNNPELYYNLAlLYSRSGDKDEAKEYY------------------------------ 111
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|
gi 1958785764 1206 lavcdfETVVTLERTATLAYINIGLIYLQhLDNYTEAFWWFTEAIRVDPL 1255
Cdd:COG5010 112 ------EKALALSPDNPNAYSNLAALLLS-LGQDDEAKAALQRALGTSPL 154
|
|
| NrfG |
COG4235 |
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, ... |
1022-1175 |
1.32e-03 |
|
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443378 [Multi-domain] Cd Length: 131 Bit Score: 40.37 E-value: 1.32e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958785764 1022 AIDDFSKCIYYDPKRSDALWKRGMFYFENENWTGAVYDFTSLLKLEPHNSQAsydpsfnehyispgnllpgtkmwsilss 1101
Cdd:COG4235 2 AIARLRQALAANPNDAEGWLLLGRAYLRLGRYDEALAAYEKALRLDPDNADA---------------------------- 53
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1958785764 1102 cdfflqtefkskskqssimiKTNRGRAYFKRNLFKQATEDFSAAIHSDPNNWLALYYRA-CLFRKCSPQRALQDY 1175
Cdd:COG4235 54 --------------------LLDLAEALLAAGDTEEAEELLERALALDPDNPEALYLLGlAAFQQGDYAEAIAAW 108
|
|
| PilF |
COG3063 |
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures]; |
870-973 |
4.36e-03 |
|
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures];
Pssm-ID: 442297 [Multi-domain] Cd Length: 94 Bit Score: 37.84 E-value: 4.36e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958785764 870 YVKCNLPPEVIKYYESELELltqeikseKKNPAFAYCRRGAIYRKLGKLQSAMnDLQETIFVEPLFLNAYWHRHFIYLFQ 949
Cdd:COG3063 2 YLKLGDLEEAEEYYEKALEL--------DPDNADALNNLGLLLLEQGRYDEAI-ALEKALKLDPNNAEALLNLAELLLEL 72
|
90 100
....*....|....*....|....
gi 1958785764 950 DKINDALDDLNfitKYNKNHAEAY 973
Cdd:COG3063 73 GDYDEALAYLE---RALELDPSAL 93
|
|
| PilF |
COG3063 |
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures]; |
1006-1075 |
4.40e-03 |
|
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures];
Pssm-ID: 442297 [Multi-domain] Cd Length: 94 Bit Score: 37.84 E-value: 4.40e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958785764 1006 LYFKRGEmYEKtnkvlAIDDFSKCIYYDPKRSDALWKRGMFYFENENWTGAVyDFTSLLKLEPHNSQASY 1075
Cdd:COG3063 1 LYLKLGD-LEE-----AEEYYEKALELDPDNADALNNLGLLLLEQGRYDEAI-ALEKALKLDPNNAEALL 63
|
|
| TPR_1 |
pfam00515 |
Tetratricopeptide repeat; |
902-933 |
8.09e-03 |
|
Tetratricopeptide repeat;
Pssm-ID: 459840 [Multi-domain] Cd Length: 34 Bit Score: 35.09 E-value: 8.09e-03
10 20 30
....*....|....*....|....*....|..
gi 1958785764 902 AFAYCRRGAIYRKLGKLQSAMNDLQETIFVEP 933
Cdd:pfam00515 1 AKALYNLGNAYFKLGKYDEALEYYEKALELNP 32
|
|
| TPR |
smart00028 |
Tetratricopeptide repeats; Repeats present in 4 or more copies in proteins. Contain a minimum ... |
1124-1152 |
9.97e-03 |
|
Tetratricopeptide repeats; Repeats present in 4 or more copies in proteins. Contain a minimum of 34 amino acids each and self-associate via a "knobs and holes" mechanism.
Pssm-ID: 197478 [Multi-domain] Cd Length: 34 Bit Score: 35.11 E-value: 9.97e-03
10 20
....*....|....*....|....*....
gi 1958785764 1124 NRGRAYFKRNLFKQATEDFSAAIHSDPNN 1152
Cdd:smart00028 6 NLGNAYLKLGDYDEALEYYEKALELDPNN 34
|
|
| |
