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Conserved domains on  [gi|2024469845|ref|XP_040519645|]
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protein YAE1 homolog [Gallus gallus]

Protein Classification

Yae1 family protein( domain architecture ID 10561203)

Yae1 family protein similar to essential proteins Yae1 and Lto1, which act as binding partners of the cytosolic Fe-S protein assembly (CIA) targeting complex

Gene Ontology:  GO:0062092|GO:0106035

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Yae1_N pfam09811
Essential protein Yae1, N terminal; Members of this family are found in the N terminal region ...
 41-79 8.19e-10

Essential protein Yae1, N terminal; Members of this family are found in the N terminal region of the essential protein Yae1. Their exact function has not, as yet, been determined. The family DUF1715, pfam08215 has now been merged into this family.


:

Pssm-ID: 430844 [Multi-domain]  Cd Length: 39  Bit Score: 52.42  E-value: 8.19e-10
                          10        20        30
                  ....*....|....*....|....*....|....*....
gi 2024469845  41 GYRDGVEAGKELALQEGFNQGYRQGAELMVACGQFRGTL 79
Cdd:pfam09811   1 GYREGISEGKEEGLQEGFDEGFQEGAQLGLEIGYLLGKL 39
 
Name Accession Description Interval E-value
Yae1_N pfam09811
Essential protein Yae1, N terminal; Members of this family are found in the N terminal region ...
 41-79 8.19e-10

Essential protein Yae1, N terminal; Members of this family are found in the N terminal region of the essential protein Yae1. Their exact function has not, as yet, been determined. The family DUF1715, pfam08215 has now been merged into this family.


Pssm-ID: 430844 [Multi-domain]  Cd Length: 39  Bit Score: 52.42  E-value: 8.19e-10
                          10        20        30
                  ....*....|....*....|....*....|....*....
gi 2024469845  41 GYRDGVEAGKELALQEGFNQGYRQGAELMVACGQFRGTL 79
Cdd:pfam09811   1 GYREGISEGKEEGLQEGFDEGFQEGAQLGLEIGYLLGKL 39
fliH PRK13386
flagellar assembly protein H; Provisional
 36-77 7.86e-03

flagellar assembly protein H; Provisional


Pssm-ID: 237372 [Multi-domain]  Cd Length: 236  Bit Score: 36.54  E-value: 7.86e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|..
gi 2024469845  36 KRLKEGYRDGVEAGKELALQEGFNQGYRQGAELMVACGQFRG 77
Cdd:PRK13386   42 QQLMAGFQEGIQQGFDQGLEEGEEEGRQEGHAAGFAQGRQKG 83
 
Name Accession Description Interval E-value
Yae1_N pfam09811
Essential protein Yae1, N terminal; Members of this family are found in the N terminal region ...
 41-79 8.19e-10

Essential protein Yae1, N terminal; Members of this family are found in the N terminal region of the essential protein Yae1. Their exact function has not, as yet, been determined. The family DUF1715, pfam08215 has now been merged into this family.


Pssm-ID: 430844 [Multi-domain]  Cd Length: 39  Bit Score: 52.42  E-value: 8.19e-10
                          10        20        30
                  ....*....|....*....|....*....|....*....
gi 2024469845  41 GYRDGVEAGKELALQEGFNQGYRQGAELMVACGQFRGTL 79
Cdd:pfam09811   1 GYREGISEGKEEGLQEGFDEGFQEGAQLGLEIGYLLGKL 39
fliH PRK13386
flagellar assembly protein H; Provisional
 36-77 7.86e-03

flagellar assembly protein H; Provisional


Pssm-ID: 237372 [Multi-domain]  Cd Length: 236  Bit Score: 36.54  E-value: 7.86e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|..
gi 2024469845  36 KRLKEGYRDGVEAGKELALQEGFNQGYRQGAELMVACGQFRG 77
Cdd:PRK13386   42 QQLMAGFQEGIQQGFDQGLEEGEEEGRQEGHAAGFAQGRQKG 83
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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