|
Name |
Accession |
Description |
Interval |
E-value |
| cc_Cep135_MBD |
cd22292 |
coiled-coil microtubule binding domain of centrosomal protein of 135 kDa (Cep135) and similar ... |
81-142 |
4.03e-21 |
|
coiled-coil microtubule binding domain of centrosomal protein of 135 kDa (Cep135) and similar proteins; Cep135, also called centrosomal protein 4, is involved in early centriole assembly, duplication, biogenesis, and formation. It is required for the recruitment of CEP295 to the proximal end of new-born centrioles at the centriolar microtubule wall during early S phase in a PLK4-dependent manner. This model corresponds to a conserved coiled-coil domain of Cep135, which is critical for microtubule binding.
Pssm-ID: 412088 [Multi-domain] Cd Length: 62 Bit Score: 87.62 E-value: 4.03e-21
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2024408258 81 ENNELHLEVLKLKEQSDHHIKDLKASLRRAENEAADLRFLNNQYVHKIKLLEKESKAKTEKI 142
Cdd:cd22292 1 ENNELHLELIKLKEESDAKIKDLKSSLRKLEHENADLRFLNSQYLHKIKVLEKESKAKSEKI 62
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
77-921 |
4.83e-21 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 99.75 E-value: 4.83e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 77 KLTRENNELHLEVLKLK-EQSDHHIKDLKASLRRAENEAADLRFLNNQYVHKIKLLEKESKAKTEKIQQLQEK--NLQAV 153
Cdd:TIGR02168 217 ELKAELRELELALLVLRlEELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKElyALANE 296
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 154 VQTPGGRKRNIPFRRQRMQIDQpvppSAVSAYP--VPQPEDPYIADLLQVADnRIQELQSEVTQLQEKLEISENGKKNYS 231
Cdd:TIGR02168 297 ISRLEQQKQILRERLANLERQL----EELEAQLeeLESKLDELAEELAELEE-KLEELKEELESLEAELEELEAELEELE 371
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 232 KQVELRDKEIERLmlaldggrSHEVISLESRSKSNEKLIAQLNLQVEYLQQSNKELENRIQDLLdtKKNVTSEVVHLSNK 311
Cdd:TIGR02168 372 SRLEELEEQLETL--------RSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELL--KKLEEAELKELQAE 441
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 312 NEELCQELNEidhLAQQLERHKEiVLETADKEIGEAKEierkdsEIQDLEETITRLKSELSSCRRQNERLSeelfGKADD 391
Cdd:TIGR02168 442 LEELEEELEE---LQEELERLEE-ALEELREELEEAEQ------ALDAAERELAQLQARLDSLERLQENLE----GFSEG 507
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 392 KENLELLLNQLEQEKQRLTEKTEnFEiKERELVLEIermrleygiALGdkspSRLDAFVKtleDDRDYYKRELEYLQKMI 471
Cdd:TIGR02168 508 VKALLKNQSGLSGILGVLSELIS-VD-EGYEAAIEA---------ALG----GRLQAVVV---ENLNAAKKAIAFLKQNE 569
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 472 KRRPSPSRRSPEKSEDLRLITRER----DELQSMLDRFEKHMIEIQSNVKLLTAerdrlNILYEQSQSELNRLRREAKHN 547
Cdd:TIGR02168 570 LGRVTFLPLDSIKGTEIQGNDREIlkniEGFLGVAKDLVKFDPKLRKALSYLLG-----GVLVVDDLDNALELAKKLRPG 644
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 548 lvsQSHVGEDGDASLADFRRLmaeKESLREKLKIQQEAANLEKskmqhdisvLENNIQQFELERCELKSTISILKERIKS 627
Cdd:TIGR02168 645 ---YRIVTLDGDLVRPGGVIT---GGSAKTNSSILERRREIEE---------LEEKIEELEEKIAELEKALAELRKELEE 709
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 628 LENELKLKSSKLIQTSDDSSQLKAELCSLHLLNEQLQRTVEDLQHRFSLKKDELQSAQEEIVKLEEKIDRLNQKSTSQDE 707
Cdd:TIGR02168 710 LEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEA 789
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 708 AVNVLRSTISVLDKEKDNLQETVDEKTEKIACLDDNLANKEKTITHLRLTLSELESSTDQLKDLLSSRDREISSLRRQLD 787
Cdd:TIGR02168 790 QIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIE 869
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 788 ASHTEIAETGRVKEIALKENRRLQDDLATMTRENQAVSSELEDAIREKEEMKTRVHNYITEVSRFESLIaskekenQELL 867
Cdd:TIGR02168 870 ELESELEALLNERASLEEALALLRSELEELSEELRELESKRSELRRELEELREKLAQLELRLEGLEVRI-------DNLQ 942
|
810 820 830 840 850
....*....|....*....|....*....|....*....|....*....|....
gi 2024408258 868 EKFRmlhtqaEDWEIKAHQAEGESSSIrlellsvDTDRRHLRERVELLEKEIQE 921
Cdd:TIGR02168 943 ERLS------EEYSLTLEEAEALENKI-------EDDEEEARRRLKRLENKIKE 983
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
314-1053 |
6.88e-16 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 83.18 E-value: 6.88e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 314 ELCQELNEIDH--LAQQLERHKEIVLETADKEIGEAKEIERKDSEIQDLEETITRLKSELSSCRRQNERLSEELFGKAdd 391
Cdd:TIGR02168 217 ELKAELRELELalLVLRLEELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALA-- 294
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 392 kenlelllnqleQEKQRLTEKTEnfEIKERELVLEIERMRLEYGIALGDKSPSRLDAFVKTLEDdrdyykrELEYLQKMI 471
Cdd:TIGR02168 295 ------------NEISRLEQQKQ--ILRERLANLERQLEELEAQLEELESKLDELAEELAELEE-------KLEELKEEL 353
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 472 KRRPSPSRRSPEKSEDLRLITRERDELqsmLDRFEKHMIEIQSNVKLLTAERDRLNILYEQSQSELNRLRREAKHNLVSQ 551
Cdd:TIGR02168 354 ESLEAELEELEAELEELESRLEELEEQ---LETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKL 430
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 552 ShvgedgDASLADFRRLMAEKESLREKLKIQQEAANLEKSKMQHDISVLENNIQQFELERCELKSTISILKERIKSLEN- 630
Cdd:TIGR02168 431 E------EAELKELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQENLEGf 504
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 631 -----ELKLKSSKLIQTSDDSSQL-----KAELCSLHLLNEQLQR-TVEDL-----------QHRF---------SLKKD 679
Cdd:TIGR02168 505 segvkALLKNQSGLSGILGVLSELisvdeGYEAAIEAALGGRLQAvVVENLnaakkaiaflkQNELgrvtflpldSIKGT 584
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 680 ELQSAQEEIVKLEEK----IDRLNQKSTSQDEAVNVLRSTISVLD--KEKDNLQETVDEKtEKIACLDDNLANKEKTITh 753
Cdd:TIGR02168 585 EIQGNDREILKNIEGflgvAKDLVKFDPKLRKALSYLLGGVLVVDdlDNALELAKKLRPG-YRIVTLDGDLVRPGGVIT- 662
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 754 lrltlseleSSTDQLKDLLSSRDREISSLRRQLDASHTEIAETgrvkEIALKENRRLQDDLATMTRENQAvssELEDAIR 833
Cdd:TIGR02168 663 ---------GGSAKTNSSILERRREIEELEEKIEELEEKIAEL----EKALAELRKELEELEEELEQLRK---ELEELSR 726
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 834 EKEEMKTRVHNYITEVSRFESLIASKEKENQELLEKFRMLHTQAEDWEIKAHQAEGESSSIRLELLSVDTDRRHLRERVE 913
Cdd:TIGR02168 727 QISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALD 806
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 914 LLEKEIQEHMIAHQAYESQISSITKNMSKLEEDIKREHQDKSSVLADLTSVRELCVKLEASKDLLSRQLASKSMDYEKVL 993
Cdd:TIGR02168 807 ELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLE 886
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 994 GELEDVKSEAELLKKQLSSERLTIQNLETLLATSRDKEFQNHLTSHEKDSEIQLLKDKLT 1053
Cdd:TIGR02168 887 EALALLRSELEELSEELRELESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQERLS 946
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
308-949 |
5.46e-12 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 70.05 E-value: 5.46e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 308 LSNKNEELCQELNEIDHLAQQLERHKEIVLETADKEIGEAKEIERKDSEIQDLEETITRLKSELSSCRRQNERLSEELFG 387
Cdd:TIGR04523 28 ANKQDTEEKQLEKKLKTIKNELKNKEKELKNLDKNLNKDEEKINNSNNKIKILEQQIKDLNDKLKKNKDKINKLNSDLSK 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 388 KADDKENLELLLNQLEQEKQRLTEKTEnfEIKERELVLEIERMRLEYGIALGDKSPSRLDAFVKTLEDDRDYYKRELEYL 467
Cdd:TIGR04523 108 INSEIKNDKEQKNKLEVELNKLEKQKK--ENKKNIDKFLTEIKKKEKELEKLNNKYNDLKKQKEELENELNLLEKEKLNI 185
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 468 QKMIKRRPSPSRRSPEKSEDLRLITRERDELQSMLDRFEKHMIEIQSNVKLLTAERDRLNILYEQSQSELNRLRREAKHN 547
Cdd:TIGR04523 186 QKNIDKIKNKLLKLELLLSNLKKKIQKNKSLESQISELKKQNNQLKDNIEKKQQEINEKTTEISNTQTQLNQLKDEQNKI 265
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 548 LVSQSHvgedgdasladfrrlmAEKESLREKLKIQQEAANLEKSKMQhdISVLENNIQQFELErcELKSTISILKERIKS 627
Cdd:TIGR04523 266 KKQLSE----------------KQKELEQNNKKIKELEKQLNQLKSE--ISDLNNQKEQDWNK--ELKSELKNQEKKLEE 325
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 628 LENELKLKSSKLIQTSDDSSQLKAELCSLHLLNEQLQRTVEDLQHRFSLKKDELQSAQEEIVKLEEKIDRLNQKSTSQDE 707
Cdd:TIGR04523 326 IQNQISQNNKIISQLNEQISQLKKELTNSESENSEKQRELEEKQNEIEKLKKENQSYKQEIKNLESQINDLESKIQNQEK 405
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 708 AVNVLRSTISVLDKEKDNLQETVDEKTEKIACLDDNLANKEKTITHLRLTLSELESSTDQLKDLLSSRDREISSLRRQLD 787
Cdd:TIGR04523 406 LNQQKDEQIKKLQQEKELLEKEIERLKETIIKNNSEIKDLTNQDSVKELIIKNLDNTRESLETQLKVLSRSINKIKQNLE 485
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 788 AshteiaetgRVKEIALKENrrlqdDLATMTRENQAVSSELEDAIREKEEMKTRVHNYITEVSRFESLIASKEKENQELl 867
Cdd:TIGR04523 486 Q---------KQKELKSKEK-----ELKKLNEEKKELEEKVKDLTKKISSLKEKIEKLESEKKEKESKISDLEDELNKD- 550
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 868 eKFRMlhtQAEDWEIKAHQAEGESSSIRLELLSVDTDRRHLRERVELLEKEIQEHMIAHQAYESQISSITKNMSKLEEDI 947
Cdd:TIGR04523 551 -DFEL---KKENLEKEIDEKNKEIEELKQTQKSLKKKQEEKQELIDQKEKEKKDLIKEIEEKEKKISSLEKELEKAKKEN 626
|
..
gi 2024408258 948 KR 949
Cdd:TIGR04523 627 EK 628
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
662-959 |
5.50e-12 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 70.35 E-value: 5.50e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 662 QLQRTVEDLQHRFSLKKDELqsAQEEIVKLEEKIDRLNQKSTSQDEAVNVLRSTISVLDKEKDNLQETVDEKTEKIACLD 741
Cdd:COG1196 217 ELKEELKELEAELLLLKLRE--LEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELL 294
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 742 DNLANKEKTITHLRLTLSELESSTDQLKDLLSSRDREISSLRRQLDASHTEIAETGRVKEIALKENRRLQDDLATMTREN 821
Cdd:COG1196 295 AELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAEL 374
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 822 QAVSSELEDAIREKEEMKTRVHNYITEVSRFESLIASKEKENQELLEKFRMLHTQAEDWEIKAHQAEGESSSIRLELLSV 901
Cdd:COG1196 375 AEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAEL 454
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 2024408258 902 DTDRRHLRERVELLEKEIQEHMIAHQAYESQISSITKNMSKLEEDIKREHQDKSSVLA 959
Cdd:COG1196 455 EEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKA 512
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
624-869 |
1.24e-11 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 69.20 E-value: 1.24e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 624 RIKSLENELKLKSSKLIQTSDDSSQLKAELCSLHLLNEQLQRTVEDLQHRFSLKKDELQSAQEEIVKLEEKIDRLNQKST 703
Cdd:COG1196 233 KLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRR 312
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 704 SQDEAVNVLRSTISVLDKEKDNLQETVDEKTEKIACLDDNLANKEKTITHLRLTLSELESSTDQLKDLLSSRDREISSLR 783
Cdd:COG1196 313 ELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEAL 392
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 784 RQLDASHTEIAETGRVKEIALKENRRLQDDLATMTRENQAVSSELEDAIREKEEMKTRVHNYITEVSRFESLIASKEKEN 863
Cdd:COG1196 393 RAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEA 472
|
....*.
gi 2024408258 864 QELLEK 869
Cdd:COG1196 473 ALLEAA 478
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
450-801 |
3.83e-11 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 67.79 E-value: 3.83e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 450 VKTLEDDRDYYKRELEYLQKMIKRRPSPSRRSPEKSEdlrlitRERDELQSMLDRFEKHMIEIQSNVKLLTAERDRLNIL 529
Cdd:TIGR02169 200 LERLRREREKAERYQALLKEKREYEGYELLKEKEALE------RQKEAIERQLASLEEELEKLTEEISELEKRLEEIEQL 273
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 530 YEQSQSELNRLRREAKHNLVSQSHvgeDGDASLADFRRLMAEKESLREKLKIQQEAANLEKSKMQHDISVLENNIQQFEL 609
Cdd:TIGR02169 274 LEELNKKIKDLGEEEQLRVKEKIG---ELEAEIASLERSIAEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERK 350
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 610 ERCELKstisilkERIKSLENELKLKSSKLIQTSDDSSQLKAELCSLHLLNEQLQRTVEDLQHRFSLKKDELQSAQEEIV 689
Cdd:TIGR02169 351 RRDKLT-------EEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELKRELDRLQEELQRLSEELA 423
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 690 KLEEKIDRLNQKSTSQDEAVNVLRSTISVLDKEKDNLQETVDEKTEKIACLDDNLANKEKTITHLRLTLSELESSTDQLK 769
Cdd:TIGR02169 424 DLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQARASE 503
|
330 340 350
....*....|....*....|....*....|..
gi 2024408258 770 DLLSSRDREISSLRRQLDASHTEIAETGRVKE 801
Cdd:TIGR02169 504 ERVRGGRAVEEVLKASIQGVHGTVAQLGSVGE 535
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
562-1023 |
5.01e-11 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 66.99 E-value: 5.01e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 562 LADFRRLMAEKESLREKLKIQQEAANL----------EKSKMQHDISVLENNIQQFELERCELKSTISILKERIKSLENE 631
Cdd:PRK02224 215 LAELDEEIERYEEQREQARETRDEADEvleeheerreELETLEAEIEDLRETIAETEREREELAEEVRDLRERLEELEEE 294
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 632 LKLKSSKLIQTSDDSSQLKAELCSLHLLNEQLQRTVEDLQHRFSLKKDELQSAQEEIVKLEEKIDRLnqkstsqdeavnv 711
Cdd:PRK02224 295 RDDLLAEAGLDDADAEAVEARREELEDRDEELRDRLEECRVAAQAHNEEAESLREDADDLEERAEEL------------- 361
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 712 lRSTISVLDKEKDNLQETVDEKTEKIACLDDNLANKEKTI-----------THLRLTLSELESSTDQLKDL---LSSRDR 777
Cdd:PRK02224 362 -REEAAELESELEEAREAVEDRREEIEELEEEIEELRERFgdapvdlgnaeDFLEELREERDELREREAELeatLRTARE 440
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 778 EISSLRRQLDASH-----TEIAETGRVKEIALKENRR--LQDDLATMTRENQAVSSELEDAI------REKEEMKTRVHN 844
Cdd:PRK02224 441 RVEEAEALLEAGKcpecgQPVEGSPHVETIEEDRERVeeLEAELEDLEEEVEEVEERLERAEdlveaeDRIERLEERRED 520
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 845 YITEVSRFESLIASKEKENQELLEKFRMLHTQAEDWEIKAHQAEGESSSIRLELLSVDTDRRHLRERVELLEKeIQEHMI 924
Cdd:PRK02224 521 LEELIAERRETIEEKRERAEELRERAAELEAEAEEKREAAAEAEEEAEEAREEVAELNSKLAELKERIESLER-IRTLLA 599
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 925 AHQAYESQISSITKNMSKLEEdikREHQDKSSVLADLTSVRELCVKLEASKDLLSRQLASKSMDY-EKVLGELEDVKSEA 1003
Cdd:PRK02224 600 AIADAEDEIERLREKREALAE---LNDERRERLAEKRERKRELEAEFDEARIEEAREDKERAEEYlEQVEEKLDELREER 676
|
490 500
....*....|....*....|
gi 2024408258 1004 ELLKKQLSSERLTIQNLETL 1023
Cdd:PRK02224 677 DDLQAEIGAVENELEELEEL 696
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
255-810 |
5.92e-11 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 66.58 E-value: 5.92e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 255 EVISLESRSKSNEKLIAQLNLQVEYLQQSNKELENRIQDLLDTKKNVTSEVVHLSNKNEELCQELNEIdhlaqqleRHKE 334
Cdd:TIGR04523 125 ELNKLEKQKKENKKNIDKFLTEIKKKEKELEKLNNKYNDLKKQKEELENELNLLEKEKLNIQKNIDKI--------KNKL 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 335 IVLETadkeigeakeierKDSEIQDLEETITRLKSELSSCRRQNERLSEELFGKADDKENLELLLNQLEQEKQRLTEKTE 414
Cdd:TIGR04523 197 LKLEL-------------LLSNLKKKIQKNKSLESQISELKKQNNQLKDNIEKKQQEINEKTTEISNTQTQLNQLKDEQN 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 415 NFEIKERELVLEIERMrleygialgdkspsrlDAFVKTLEDDRDYYKRELEYLQKmikrrPSPSRRSPEKSEDLRLITRE 494
Cdd:TIGR04523 264 KIKKQLSEKQKELEQN----------------NKKIKELEKQLNQLKSEISDLNN-----QKEQDWNKELKSELKNQEKK 322
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 495 RDELQSMLDRFEKHMIEIQSNVKLLTAERDrlnilyeQSQSELNRLRREAKHNLVSQSHVGEDGDASLADFRRLMAEKES 574
Cdd:TIGR04523 323 LEEIQNQISQNNKIISQLNEQISQLKKELT-------NSESENSEKQRELEEKQNEIEKLKKENQSYKQEIKNLESQIND 395
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 575 LREKLKIQQEAANLEKSKmqhdISVLENNIQQFELERCELKSTISILKERIKSLENELKLKSSKLIQTSDDSSQLKAELC 654
Cdd:TIGR04523 396 LESKIQNQEKLNQQKDEQ----IKKLQQEKELLEKEIERLKETIIKNNSEIKDLTNQDSVKELIIKNLDNTRESLETQLK 471
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 655 SLHLLNEQLQRTVEDLQHRFSLKKDELQSAQEEIVKLEEKIDRLNQKSTSQDEAVNVLRSTISVLDKEKDNLQETVDEKT 734
Cdd:TIGR04523 472 VLSRSINKIKQNLEQKQKELKSKEKELKKLNEEKKELEEKVKDLTKKISSLKEKIEKLESEKKEKESKISDLEDELNKDD 551
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2024408258 735 E--KIACLDDNLANKEKTITHLRLTLSELESSTDQLKDLLSSRDREISSLRRQLDASHTEIAETGRVKEIALKENRRL 810
Cdd:TIGR04523 552 FelKKENLEKEIDEKNKEIEELKQTQKSLKKKQEEKQELIDQKEKEKKDLIKEIEEKEKKISSLEKELEKAKKENEKL 629
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
203-976 |
6.88e-11 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 66.63 E-value: 6.88e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 203 DNRIQELQSEVTQLQEklEISENGKKNYSKQVELRD--KEIERLmlaldggRSHEVISLESRSKSNEKLIAQLNLQVEYL 280
Cdd:TIGR02169 243 ERQLASLEEELEKLTE--EISELEKRLEEIEQLLEElnKKIKDL-------GEEEQLRVKEKIGELEAEIASLERSIAEK 313
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 281 QQSNKELENRIQDLldtkknvtsevvhlsnkNEELCQELNEIDHLAQQLERHKEIVLETADKEIGEAKEIERKDSEIQDL 360
Cdd:TIGR02169 314 ERELEDAEERLAKL-----------------EAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEV 376
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 361 EETITRLKSELSSCRRQNERLSEELfgkaddkenlelllNQLEQEKQRLTEKTENFEIKERELVLEIERMRleygialgd 440
Cdd:TIGR02169 377 DKEFAETRDELKDYREKLEKLKREI--------------NELKRELDRLQEELQRLSEELADLNAAIAGIE--------- 433
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 441 kspSRLDAFVKTLEDDRDYYKRELEYLQKMIKRRPSPSRRSPEKSEDLRLITRERDELQSMLDRFEKHMIEIQSNVKLLT 520
Cdd:TIGR02169 434 ---AKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQARASEERVRGGR 510
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 521 AERDRLNILYEQ---SQSELNRLRRE-------AKHNLVSQSHVGEDGDA--SLADFRRLMAEKESLREKLKIQQEAANL 588
Cdd:TIGR02169 511 AVEEVLKASIQGvhgTVAQLGSVGERyataievAAGNRLNNVVVEDDAVAkeAIELLKRRKAGRATFLPLNKMRDERRDL 590
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 589 EKSKMQHDISVLENNI---QQFE------------LERCELKSTISIlKERIKSLENEL------------KLKSSKLIQ 641
Cdd:TIGR02169 591 SILSEDGVIGFAVDLVefdPKYEpafkyvfgdtlvVEDIEAARRLMG-KYRMVTLEGELfeksgamtggsrAPRGGILFS 669
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 642 TSD--DSSQLKAELCSLHLLNEQLQRTVEDLQHRFSLKKDELQSAQEEIVKLEEKIDRLNQKSTSQDEAVNVLRSTISVL 719
Cdd:TIGR02169 670 RSEpaELQRLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSL 749
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 720 DKEKDNLQETVDEKTEKIACLDDNLANKEKTITHLRLTLSEleSSTDQLKDLLSSRDREISSLRRQLDASHTEIAETGRV 799
Cdd:TIGR02169 750 EQEIENVKSELKELEARIEELEEDLHKLEEALNDLEARLSH--SRIPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLE 827
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 800 KEIALKENRRLQDDLATMTRENQAVSSELEDAIREKEEMKTRVHNYITEVSRFESLIASKEKENQELLEKFRMLHTQAED 879
Cdd:TIGR02169 828 KEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKERDELEAQLRELERKIEE 907
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 880 WEIKAHQAEGESSSIRLELLSVDTDRRHLRERVELLEKEIQEHMIAHQAYEsQISSITKNMSKLEEDIKREHQDKSSVLA 959
Cdd:TIGR02169 908 LEAQIEKKRKRLSELKAKLEALEEELSEIEDPKGEDEEIPEEELSLEDVQA-ELQRVEEEIRALEPVNMLAIQEYEEVLK 986
|
810
....*....|....*..
gi 2024408258 960 DLTSVRELCVKLEASKD 976
Cdd:TIGR02169 987 RLDELKEKRAKLEEERK 1003
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
314-855 |
1.16e-10 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 65.83 E-value: 1.16e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 314 ELCQELNEIDHLAQQLERHKEIVLETADKEIGEAKEIERKDSEIQDLEETITRLKSELSSCRRQNERLSEELFGK----- 388
Cdd:PRK02224 210 GLESELAELDEEIERYEEQREQARETRDEADEVLEEHEERREELETLEAEIEDLRETIAETEREREELAEEVRDLrerle 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 389 --ADDKENLELLLNQLEQEKQRLTEKTENFEIKERELVLEIERMRLEYGIALGDKSPSRLDAfvKTLEDDRDYYKRELEY 466
Cdd:PRK02224 290 elEEERDDLLAEAGLDDADAEAVEARREELEDRDEELRDRLEECRVAAQAHNEEAESLREDA--DDLEERAEELREEAAE 367
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 467 LQKMIKRRPSPSRRSPEKSEDLrlitreRDELQSMLDRFEKhmieiqsnvklLTAERDRLNILYEQSQSELNRLRREAKh 546
Cdd:PRK02224 368 LESELEEAREAVEDRREEIEEL------EEEIEELRERFGD-----------APVDLGNAEDFLEELREERDELREREA- 429
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 547 nlvsqshvgeDGDASLADFRRLMAEKESLREKLKIQQEAANLEKSKMQHDISVLENNIQQFELERCELKSTISILKERIK 626
Cdd:PRK02224 430 ----------ELEATLRTARERVEEAEALLEAGKCPECGQPVEGSPHVETIEEDRERVEELEAELEDLEEEVEEVEERLE 499
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 627 SLEnelklksskliqtsdDSSQLKAELCSLHLLNEQLQRTVEDLQHRFSLKKDELQSAQEEIVKLEEKIDRLNQKSTSQD 706
Cdd:PRK02224 500 RAE---------------DLVEAEDRIERLEERREDLEELIAERRETIEEKRERAEELRERAAELEAEAEEKREAAAEAE 564
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 707 EAVNVLRSTISVLDKEKDNLQETVdEKTEKIACLDDNLANKEKTITHLRLTLSELESSTDQLKDLLSSRDREISSLRRQL 786
Cdd:PRK02224 565 EEAEEAREEVAELNSKLAELKERI-ESLERIRTLLAAIADAEDEIERLREKREALAELNDERRERLAEKRERKRELEAEF 643
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2024408258 787 DASHTEIAETGRVKEIALKENrrLQDDLATMTRENQAVSSE---LEDAIREKEEMKTRVHNYITEVSRFESL 855
Cdd:PRK02224 644 DEARIEEAREDKERAEEYLEQ--VEEKLDELREERDDLQAEigaVENELEELEELRERREALENRVEALEAL 713
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
348-731 |
3.00e-09 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 61.61 E-value: 3.00e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 348 KEIERKDSEIQDLEETITRLKSELSSCRRQNERLSEELFGKADDKENLELLLNQLEQEKQRLTEKTENFEikERELVLEI 427
Cdd:TIGR02168 677 REIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLE--ERIAQLSK 754
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 428 ERMRLEYGIALGDKSPSRLDAFVKTLEDDRDYYKRELEYLQkmikrrpspsrrspeksEDLRLITRERDELQSMLDRFEK 507
Cdd:TIGR02168 755 ELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLK-----------------EELKALREALDELRAELTLLNE 817
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 508 HMIEIQSNVKLLTAERDRLnilyEQSQSELNRLRREAKHNLVSQSHVGEDGDASLADFRRLMAEKESLREKLKIQQEAAN 587
Cdd:TIGR02168 818 EAANLRERLESLERRIAAT----ERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLR 893
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 588 LEKSKMQHDISVLENNIQQFELERCELKSTISILKERIKSLENELklksskliqtsddsSQLKAELcslhllNEQLQRTV 667
Cdd:TIGR02168 894 SELEELSEELRELESKRSELRRELEELREKLAQLELRLEGLEVRI--------------DNLQERL------SEEYSLTL 953
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 668 EDLQHRFSLKKDELQSAQEEIVKLEEKIDR---------------------LNQKSTSQDEAVNVLRSTISVLDKE-KDN 725
Cdd:TIGR02168 954 EEAEALENKIEDDEEEARRRLKRLENKIKElgpvnlaaieeyeelkerydfLTAQKEDLTEAKETLEEAIEEIDREaRER 1033
|
....*.
gi 2024408258 726 LQETVD 731
Cdd:TIGR02168 1034 FKDTFD 1039
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
524-1029 |
3.31e-09 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 61.29 E-value: 3.31e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 524 DRLNILYEQSQSELNRLRREAK---HNLVSQSHVGEDGDASLADFRRlmAEKESLREKLKIQQEAANLEKSKMQHDISVL 600
Cdd:pfam15921 245 DQLEALKSESQNKIELLLQQHQdriEQLISEHEVEITGLTEKASSAR--SQANSIQSQLEIIQEQARNQNSMYMRQLSDL 322
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 601 ENNIQQFeleRCELKSTISILKERIKSLENELKLKSSKLIQTSDDSSQLKAELCSLhllNEQLQRTVEDLQHR---FSLK 677
Cdd:pfam15921 323 ESTVSQL---RSELREAKRMYEDKIEELEKQLVLANSELTEARTERDQFSQESGNL---DDQLQKLLADLHKRekeLSLE 396
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 678 KD---------------------ELQSAQEEIVKLEEKIDRLNQKSTSQ-----------DEAVNVLRSTISVLDKEKDN 725
Cdd:pfam15921 397 KEqnkrlwdrdtgnsitidhlrrELDDRNMEVQRLEALLKAMKSECQGQmerqmaaiqgkNESLEKVSSLTAQLESTKEM 476
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 726 LQETVDEKTEK----------IACLDDNLANKEKTI-------THLR----LTLSELE-------------SSTDQLKDL 771
Cdd:pfam15921 477 LRKVVEELTAKkmtlessertVSDLTASLQEKERAIeatnaeiTKLRsrvdLKLQELQhlknegdhlrnvqTECEALKLQ 556
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 772 LSSRDREISSLRRQLDASHTEIAETGRV-----------------KEIALKENRRLQDDLATMTRENQAVSSELE----- 829
Cdd:pfam15921 557 MAEKDKVIEILRQQIENMTQLVGQHGRTagamqvekaqlekeindRRLELQEFKILKDKKDAKIRELEARVSDLElekvk 636
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 830 ------DAIREKEEMKTRVHNYITEVSRFESLIASKEKENQELLEKFR----MLHTQAEDWEIKAHQAEGESSSIRLELL 899
Cdd:pfam15921 637 lvnagsERLRAVKDIKQERDQLLNEVKTSRNELNSLSEDYEVLKRNFRnkseEMETTTNKLKMQLKSAQSELEQTRNTLK 716
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 900 SVDTDRRHLRERVELLEKEIQEHMIAHQAYESQISSITKNMSKLEEDIKREHQDKSSVLADLTSVrelcvkleaskdlls 979
Cdd:pfam15921 717 SMEGSDGHAMKVAMGMQKQITAKRGQIDALQSKIQFLEEAMTNANKEKHFLKEEKNKLSQELSTV--------------- 781
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|
gi 2024408258 980 rqlaskSMDYEKVLGELEDVKSEAELLKKQLSSERLTIQNLETLLATSRD 1029
Cdd:pfam15921 782 ------ATEKNKMAGELEVLRSQERRLKEKVANMEVALDKASLQFAECQD 825
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
259-1023 |
3.55e-09 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 61.24 E-value: 3.55e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 259 LESRSKSNEKLIAQLNLQVEYLQQSNKELENRIQDLLDTKKNVTSEvvhLSNKNEELCQELNEIDHLAQQLERhKEIVLE 338
Cdd:TIGR02169 200 LERLRREREKAERYQALLKEKREYEGYELLKEKEALERQKEAIERQ---LASLEEELEKLTEEISELEKRLEE-IEQLLE 275
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 339 TADKEI-----GEAKEIERK----DSEIQDLEETITRLKSELSSCRRQNERLSEELFGKADDKENLELLLNQLEQEKQRL 409
Cdd:TIGR02169 276 ELNKKIkdlgeEEQLRVKEKigelEAEIASLERSIAEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKL 355
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 410 TEktenfEIKERELVLEIERMRLEYGIALGDKSPSRLDAFVKTLEDdrdyYKRELEYLQKMIKRRPSPSRRSPEKSEDLR 489
Cdd:TIGR02169 356 TE-----EYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEK----LKREINELKRELDRLQEELQRLSEELADLN 426
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 490 L--------ITRERDELQSMLDRFEKHMIEIQSNVKLLTAERDRLNIL---YEQSQSELNRLRREAKHNLVSQSHVGEDG 558
Cdd:TIGR02169 427 AaiagieakINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLkeeYDRVEKELSKLQRELAEAEAQARASEERV 506
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 559 ----------DASLADFRRLMAEKESLREKL--------------------------------------------KIQQE 584
Cdd:TIGR02169 507 rggraveevlKASIQGVHGTVAQLGSVGERYataievaagnrlnnvvveddavakeaiellkrrkagratflplnKMRDE 586
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 585 AANLEKSKMQHDISVLENNI---QQFE------------LERCELKSTISIlKERIKSLENELKLKSSKLIQTSDDSSql 649
Cdd:TIGR02169 587 RRDLSILSEDGVIGFAVDLVefdPKYEpafkyvfgdtlvVEDIEAARRLMG-KYRMVTLEGELFEKSGAMTGGSRAPR-- 663
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 650 kaelcSLHLLNEQLQRTVEDLQHRFSLKKDELQSAQEEIVKLEEKIDRLNQKSTSQDEAVNVLRSTISVLDKEKDNLQET 729
Cdd:TIGR02169 664 -----GGILFSRSEPAELQRLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKER 738
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 730 VDEKTEKIACLDDNLANKEKTITHLRLTLSELESSTDQLKDLLSS-----RDREISSLRRQLDASHTEIAE-TGRVKEIA 803
Cdd:TIGR02169 739 LEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEALNDlearlSHSRIPEIQAELSKLEEEVSRiEARLREIE 818
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 804 LKENRRLQdDLATMTRENQAVSSELEDAIREKEEMKTRVHNYITEVSRFESLIASKEKENQELLEKFRMLHTqaedwEIK 883
Cdd:TIGR02169 819 QKLNRLTL-EKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKK-----ERD 892
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 884 AHQAEGESSSIRLELLSVDTDRrhLRERVELLEKEIqehmiahQAYESQISSItknmskleEDIKREHQDKSSVLADLTS 963
Cdd:TIGR02169 893 ELEAQLRELERKIEELEAQIEK--KRKRLSELKAKL-------EALEEELSEI--------EDPKGEDEEIPEEELSLED 955
|
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 964 VRELCVKLEASKDLLSRQLASKSMDYEKVLGELEDVKSEAELLKKQLSSERLTIQNLETL 1023
Cdd:TIGR02169 956 VQAELQRVEEEIRALEPVNMLAIQEYEEVLKRLDELKEKRAKLEEERKAILERIEEYEKK 1015
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
259-788 |
4.88e-09 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 60.46 E-value: 4.88e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 259 LESRSKSNEKLIAQLNLQVEYLQ---QSNKELENRIQDLLDTKKNVTSEVVHLSNKNEELCQELNEIDHLAQQLERHKEI 335
Cdd:PRK03918 160 YENAYKNLGEVIKEIKRRIERLEkfiKRTENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKELEELKEE 239
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 336 VLETADKEIGEAKEIERKDSEIQDLEETITRLKSELSSCRRQNERLsEELFGKADDKENLELLLNQLEQEKQRLTEKTEN 415
Cdd:PRK03918 240 IEELEKELESLEGSKRKLEEKIRELEERIEELKKEIEELEEKVKEL-KELKEKAEEYIKLSEFYEEYLDELREIEKRLSR 318
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 416 FEIKERELVLEIERM--------RLEYGIALGDKSPSRLDAFVKTLED--------DRDYYKRELEYLQKMIKRRPSPSR 479
Cdd:PRK03918 319 LEEEINGIEERIKELeekeerleELKKKLKELEKRLEELEERHELYEEakakkeelERLKKRLTGLTPEKLEKELEELEK 398
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 480 RSPEKSEDLRLITRERDELQSMLDRFEKHMIEIQSN------VKLLTAERDRLNILYEQSqSELNRLRREAKhnlvSQSH 553
Cdd:PRK03918 399 AKEEIEEEISKITARIGELKKEIKELKKAIEELKKAkgkcpvCGRELTEEHRKELLEEYT-AELKRIEKELK----EIEE 473
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 554 VGEDGDASLADFRRLMAEKESLREKLKIQQEAANLEKSKMQHDISVLENNIQQFEL---ERCELKSTISILKERIKSLEn 630
Cdd:PRK03918 474 KERKLRKELRELEKVLKKESELIKLKELAEQLKELEEKLKKYNLEELEKKAEEYEKlkeKLIKLKGEIKSLKKELEKLE- 552
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 631 ELKLKSSKLIQTSDDSSQLKAELcsLHLLNEQLQRTVEDLQHR------FSLKKDELQSAQEEIVKLEEKIDRLNQKSTS 704
Cdd:PRK03918 553 ELKKKLAELEKKLDELEEELAEL--LKELEELGFESVEELEERlkelepFYNEYLELKDAEKELEREEKELKKLEEELDK 630
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 705 QDEAVNVLRSTISVLDKEKDNLQETVDEKTEKiaclddnlaNKEKTITHLRLTLSELESSTDQLKDLLSSRDREISSLRR 784
Cdd:PRK03918 631 AFEELAETEKRLEELRKELEELEKKYSEEEYE---------ELREEYLELSRELAGLRAELEELEKRREEIKKTLEKLKE 701
|
....
gi 2024408258 785 QLDA 788
Cdd:PRK03918 702 ELEE 705
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
199-841 |
6.69e-09 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 60.34 E-value: 6.69e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 199 LQVADNRIQELQSEVTQLQEKLEISENGKKNYSKQVELRDKEIERLMLALDGGRShEVISLESRSKSNEKLIAQLNLQVE 278
Cdd:COG1196 241 LEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLA-ELARLEQDIARLEERRRELEERLE 319
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 279 YLQQSNKELENRIQDLLDTKKNVTSEVVHLSNKNEELCQELNEidhLAQQLERHKEIVLETADKEIGEAKEIERKDSEIQ 358
Cdd:COG1196 320 ELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAE---AEEALLEAEAELAEAEEELEELAEELLEALRAAA 396
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 359 DLEETITRLKSELSSCRRQNERLSEELfgKADDKENLELLLNQLEQEKQRLTEKTENFEIKERELVLEIERMRLEYGIAL 438
Cdd:COG1196 397 ELAAQLEELEEAEEALLERLERLEEEL--EELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAAL 474
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 439 GDKSPSRLDAfvktlEDDRDYYKRELEYLQKMIKRRPSPSRRSPEKSEDLRLITRERDELQSMLDRFEKHMIEiqsnvkl 518
Cdd:COG1196 475 LEAALAELLE-----ELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEA------- 542
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 519 lTAERDRLNILYEQSQSELNRLRREAKHNLvsqshvgedGDASLADFRRLMAEKESLREKLKIQQEAANLEKSKMQHDIS 598
Cdd:COG1196 543 -ALAAALQNIVVEDDEVAAAAIEYLKAAKA---------GRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREAD 612
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 599 VLENNIQQFELERCELKSTISILKERIKSLENELKLKSskliqtsddssqlkaelcslhLLNEQLQRTVEDLQHRFSLKK 678
Cdd:COG1196 613 ARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVT---------------------LEGEGGSAGGSLTGGSRRELL 671
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 679 DELQSAQEEIVKLEEKIDRLNQKSTSQDEAVNVLRSTISVLDKEKDNLQETVDEKTEKiaclddnlanKEKTITHLRLTL 758
Cdd:COG1196 672 AALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQ----------LEAEREELLEEL 741
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 759 SELESSTDQLKDLLSSRDREISSLRRQLDASHTEIAETGRVKEIALKENRRLQDDLATMTRENQAVSSE---LEDAIRE- 834
Cdd:COG1196 742 LEEEELLEEEALEELPEPPDLEELERELERLEREIEALGPVNLLAIEEYEELEERYDFLSEQREDLEEAretLEEAIEEi 821
|
....*..
gi 2024408258 835 KEEMKTR 841
Cdd:COG1196 822 DRETRER 828
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
198-821 |
7.67e-09 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 60.13 E-value: 7.67e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 198 LLQVADNRIQELQSE----VTQLQEKLEISENGKKNYSKQVELRDKEierlmlaldgGRSHEVISLESRSKSnEKLIAQL 273
Cdd:pfam15921 261 LLQQHQDRIEQLISEheveITGLTEKASSARSQANSIQSQLEIIQEQ----------ARNQNSMYMRQLSDL-ESTVSQL 329
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 274 NLQveyLQQSNKELENRIQDLLDTKKNVTSEVVHLSNKNEELCQELNEIDHLAQQL-----ERHKEIVLETA------DK 342
Cdd:pfam15921 330 RSE---LREAKRMYEDKIEELEKQLVLANSELTEARTERDQFSQESGNLDDQLQKLladlhKREKELSLEKEqnkrlwDR 406
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 343 EIGEA-------KEIERKDSEIQDLEETITRLKSElssCRRQNERLSEELFGKADDKENLELLLNQLEQEK-------QR 408
Cdd:pfam15921 407 DTGNSitidhlrRELDDRNMEVQRLEALLKAMKSE---CQGQMERQMAAIQGKNESLEKVSSLTAQLESTKemlrkvvEE 483
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 409 LTEKTENFEIKERELV-LEIERMRLEYGIALGDKSPSRLDAFVKTLEDDRDYYKRELEYLQKMIKRRPSPSRRSPEKSED 487
Cdd:pfam15921 484 LTAKKMTLESSERTVSdLTASLQEKERAIEATNAEITKLRSRVDLKLQELQHLKNEGDHLRNVQTECEALKLQMAEKDKV 563
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 488 LRLITRERDELQSMLDR---------FEKHMIEIQSNVKLLtaERDRLNILYEQSQSELNRLRREAKHNLVSQSHVGEDG 558
Cdd:pfam15921 564 IEILRQQIENMTQLVGQhgrtagamqVEKAQLEKEINDRRL--ELQEFKILKDKKDAKIRELEARVSDLELEKVKLVNAG 641
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 559 DASLADFRRLMAEKESLREKLKIQQEAANleksKMQHDISVLENNiqqFELERCELKSTISILKERIKSLENELKlkssk 638
Cdd:pfam15921 642 SERLRAVKDIKQERDQLLNEVKTSRNELN----SLSEDYEVLKRN---FRNKSEEMETTTNKLKMQLKSAQSELE----- 709
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 639 liqtsddssQLKAELCSLHLLNEQLQRTVEDLQHRFSLKKDELQSAQEEIVKLEEKIDRLNQKSTSQDEAVNVLRSTISV 718
Cdd:pfam15921 710 ---------QTRNTLKSMEGSDGHAMKVAMGMQKQITAKRGQIDALQSKIQFLEEAMTNANKEKHFLKEEKNKLSQELST 780
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 719 LDKEKDNLQETVDEKTEKIACLDDNLANKEKTITHLRLTLSELEsstdqlkDLLSSRDREISSLRRQLDASHTEIAETGR 798
Cdd:pfam15921 781 VATEKNKMAGELEVLRSQERRLKEKVANMEVALDKASLQFAECQ-------DIIQRQEQESVRLKLQHTLDVKELQGPGY 853
|
650 660
....*....|....*....|...
gi 2024408258 799 VKEIALKEnRRLQDDLATMTREN 821
Cdd:pfam15921 854 TSNSSMKP-RLLQPASFTRTHSN 875
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
417-949 |
1.62e-08 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 58.79 E-value: 1.62e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 417 EIKERELVLEIERMRLEYGIALGDKSpsRLDAFVKTLEDDRDYYKRELEYLQKMI----KRRPSPSRRSPEKSEDLRLIT 492
Cdd:COG1196 217 ELKEELKELEAELLLLKLRELEAELE--ELEAELEELEAELEELEAELAELEAELeelrLELEELELELEEAQAEEYELL 294
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 493 RERDELQSMLDRFEKHMIEIQSNVKLLTAERDRLNILYEQSQSELNRLRREAKHNLVSQSHVGE---DGDASLADFRRLM 569
Cdd:COG1196 295 AELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAelaEAEEALLEAEAEL 374
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 570 AEKESLREKLKIQQEAANLEKSKMQHDISVLENNIQQFELERCELKSTISILKERIKSLENELKLKSSKLIQTSDDSSQL 649
Cdd:COG1196 375 AEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAEL 454
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 650 KAELCSLHLLNEQLQRTVEDLQHRFSLKKDELQSAQEEIVKLEEKIDRLNQKSTS------------QDEAVNVLRSTIS 717
Cdd:COG1196 455 EEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGvkaalllaglrgLAGAVAVLIGVEA 534
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 718 VLDKEKDN------LQETVDEKTEKIACLDDNLANKEKTITHLRLTLSELESSTDQLKDLLSSRD--REISSLRRQLDAS 789
Cdd:COG1196 535 AYEAALEAalaaalQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAavDLVASDLREADAR 614
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 790 HTEIAETGRVKEIALKENRRLQDDLATMTRENQAVSSELEDAIREKEEMKTRVhnyITEVSRFESLIASKEKENQELLEK 869
Cdd:COG1196 615 YYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSR---RELLAALLEAEAELEELAERLAEE 691
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 870 FRMLHTQAEDWEIKAHQAEGESSSIRLELLSVDTDRRHLRERVELLEKEIQEHMIAHQAYESQISSITKNMSKLEEDIKR 949
Cdd:COG1196 692 ELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELER 771
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
460-842 |
5.86e-08 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 57.39 E-value: 5.86e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 460 YKRELEYLQKMIKRRPSPSRRSPEKSEDLRLITRERDELQSMLDRFEKHMIEIQSNVKLLTAERDRLNILYEQSQSELNR 539
Cdd:TIGR02169 669 SRSEPAELQRLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSS 748
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 540 LRREAkhnlvsqshvgEDGDASLADfrrLMAEKESLREKL-KIQQEAANLEKSKMQHDISVLENNIQQFELERCELKSTI 618
Cdd:TIGR02169 749 LEQEI-----------ENVKSELKE---LEARIEELEEDLhKLEEALNDLEARLSHSRIPEIQAELSKLEEEVSRIEARL 814
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 619 SILKERIKSLENELKLKSSKLIQTSDDSSQLKAELCSLHLLNEQLQRTVEDLQHRFSLKKDELQSAQEEIVKLEEKIDRL 698
Cdd:TIGR02169 815 REIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKERDEL 894
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 699 NQKSTSQDEAVNVLRSTISVLDKEKDNLQETVDEKTEKIACLDDNLANKEKTithlrltlSELESSTDQLKDLLSSRDRE 778
Cdd:TIGR02169 895 EAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEEELSEIEDPKGEDEEI--------PEEELSLEDVQAELQRVEEE 966
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2024408258 779 ISSLRrqlDASHTEIAETgrvkEIALKENRRLQDDLATMTREnqavSSELEDAIREKEEMKTRV 842
Cdd:TIGR02169 967 IRALE---PVNMLAIQEY----EEVLKRLDELKEKRAKLEEE----RKAILERIEEYEKKKREV 1019
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
317-921 |
9.61e-08 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 56.48 E-value: 9.61e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 317 QELNEIDHLAQQLE-RHKEIVLETADKEIGEAK-EIERKDSEIQDLEETITRLKSELSSCRRQNERLSEELFGKADDKEN 394
Cdd:COG1196 220 EELKELEAELLLLKlRELEAELEELEAELEELEaELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELAR 299
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 395 LELLLNQLEQEKQRLTEKTENFEIKERELVLEIERMRLEygialgdkspsrldafVKTLEDDRDYYKRELEYLQKMIKRR 474
Cdd:COG1196 300 LEQDIARLEERRRELEERLEELEEELAELEEELEELEEE----------------LEELEEELEEAEEELEEAEAELAEA 363
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 475 PSPSRRSPEKSEDLRlitRERDELQSMLDRFEKHMIEIQSNVKLLTAERDRLNILYEQSQSELNRLRREAKHNLVSQSHV 554
Cdd:COG1196 364 EEALLEAEAELAEAE---EELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEE 440
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 555 GEDGDASLADFRRLMAEKESLREKLKIQQEAANLekskmqhdisvLENNIQQFELERCELKSTISILKERIKSLENELK- 633
Cdd:COG1196 441 EEALEEAAEEEAELEEEEEALLELLAELLEEAAL-----------LEAALAELLEELAEAAARLLLLLEAEADYEGFLEg 509
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 634 LKSSKLIQTSDDSSQLKAELCSLHLLNEQLQRTVEDLQHRFSLKKDELQSAQEEIVKLEEKIDRLNQKSTSQDEAVNVLR 713
Cdd:COG1196 510 VKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALA 589
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 714 STISVLDKEKDNLQETVDEKTEKIACLDDNLANKEKTITHLRLTLSELESSTDQLKDLLSSRDREISSLRRQldashtEI 793
Cdd:COG1196 590 AALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGS------LT 663
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 794 AETGRVKEIALKENRRLQDDLATMTRENQAVSSELEDAIREKEEMKTRvhnyitevsrfesLIASKEKENQELLEKFRML 873
Cdd:COG1196 664 GGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAE-------------AEEERLEEELEEEALEEQL 730
|
570 580 590 600
....*....|....*....|....*....|....*....|....*...
gi 2024408258 874 HTQAEDWEIKAHQAEGESSSIRLELLSVDTDRRHLRERVELLEKEIQE 921
Cdd:COG1196 731 EAEREELLEELLEEEELLEEEALEELPEPPDLEELERELERLEREIEA 778
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
262-837 |
1.82e-07 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 55.71 E-value: 1.82e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 262 RSKSNEKLIAQLNLQVEYLQQSNKELENRIQDLLDTKKNVTSEVVHLSNKNEELCQELNEIDHLAQQLERHKEIVLETAD 341
Cdd:COG1196 216 RELKEELKELEAELLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLA 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 342 KEIGEAKEIERKDSEIQDLEETITRLKSELSSCRRQNERLSEELFGKADDKENLELLLNQLEQEKQRLTEKTENFEIKER 421
Cdd:COG1196 296 ELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELA 375
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 422 ELVLEIERMRleygialgdkspSRLDAFVKTLEDDRDYYKRELEYLQKMIKRRPSPSRRSPEKSEDLRLITRERDELQSM 501
Cdd:COG1196 376 EAEEELEELA------------EELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEA 443
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 502 LDRFEKHMIEIQSNVKLLTAERDRLNILYEQSQSELNRLRREAkHNLVSQSHVGEDGDASLADFrrlmaEKESLREKLKI 581
Cdd:COG1196 444 LEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEEL-AEAAARLLLLLEAEADYEGF-----LEGVKAALLLA 517
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 582 QQEAANLEKSKMQHDISVLENNIQQFELERCELK--STISILKERIKSLENELKLKSSKLIQTSDDSSQLKAELcSLHLL 659
Cdd:COG1196 518 GLRGLAGAVAVLIGVEAAYEAALEAALAAALQNIvvEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAA-LARGA 596
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 660 NEQLQRTVEDLQHRFSLKKDELQSAQEEIVKLEEKIDRLNQKSTSQDEAVNVLRSTISVLDKEKDNLQETVDEKTEKIAC 739
Cdd:COG1196 597 IGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLE 676
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 740 LDDNLANKEKTITHLRLTLSELESSTDQLKDLLSSRDREISSLRRQLDASHTEIAETGRVKEIALKENRRLQDDLATMTR 819
Cdd:COG1196 677 AEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEEL 756
|
570
....*....|....*...
gi 2024408258 820 ENQAVSSELEDAIREKEE 837
Cdd:COG1196 757 PEPPDLEELERELERLER 774
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
101-732 |
3.74e-07 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 54.56 E-value: 3.74e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 101 KDLKASLRRAENEAadlrflnnqYVHKIKLLEKESKAKTEKIQQLQEKNLQAVVQTpggRKRNIPFRRQRMQIDQpvpps 180
Cdd:COG1196 216 RELKEELKELEAEL---------LLLKLRELEAELEELEAELEELEAELEELEAEL---AELEAELEELRLELEE----- 278
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 181 avsaypvpqpedpyIADLLQVADNRIQELQSEVTQLQEKLEISENGKKNYSKQVELRDKEIERLMLALDgGRSHEVISLE 260
Cdd:COG1196 279 --------------LELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELE-ELEEELEELE 343
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 261 SRSKSNEKLIAQLNLQVEYLQQSNKELENRIQDLLDTKKNVTSEVVHLSNKNEELCQELNE----IDHLAQQLERHKEIV 336
Cdd:COG1196 344 EELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEEleeaEEALLERLERLEEEL 423
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 337 LETADKEIGEAKEIERKDSEIQDLEETITRLKSELSSCRRQNERLSEELFGKA---DDKENLELLLNQLEQEKQRLTEKT 413
Cdd:COG1196 424 EELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEaalAELLEELAEAAARLLLLLEAEADY 503
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 414 ENFEIKERELVLEIERMRLEYGIALGDKSPSRLDAFVKTLE---------DDRDYYKRELEYLQKMIK-------RRPSP 477
Cdd:COG1196 504 EGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAALaaalqnivvEDDEVAAAAIEYLKAAKAgratflpLDKIR 583
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 478 SRRSPEKSEDLRLITRERDELQSMLDRFEKHMIEIQSNVKLLTAERDRLNILYEQSQSELNRLRREAKhnlvsQSHVGED 557
Cdd:COG1196 584 ARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTL-----EGEGGSA 658
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 558 GDASLADFRRLMAEKESLREKLKIQQEAANLEKSKMQHDISVLENNIQQFELERCELKSTISILKERIKSLENELKLKSS 637
Cdd:COG1196 659 GGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELL 738
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 638 KLIQTSDDSSQLKAELCSLHLLN-EQLQRTVEDLQHRfsLKK---------DELQSAQEEIVKLEEKIDRLNqkstsqdE 707
Cdd:COG1196 739 EELLEEEELLEEEALEELPEPPDlEELERELERLERE--IEAlgpvnllaiEEYEELEERYDFLSEQREDLE-------E 809
|
650 660
....*....|....*....|....*.
gi 2024408258 708 AVNVLRSTISVLDKE-KDNLQETVDE 732
Cdd:COG1196 810 ARETLEEAIEEIDREtRERFLETFDA 835
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
775-1061 |
5.86e-07 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 53.79 E-value: 5.86e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 775 RDREISSLRRQLDASHTEIAETGRVKEIALKENRRLQDDLATMTRENQAVSSELEDAIREKEEMKTRVHNYITEVSRFES 854
Cdd:COG1196 223 KELEAELLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQ 302
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 855 LIASKEKENQELLEKFRMLHTQAEDWEIKAHQAEGESSSIRLELLSvdtdrrhLRERVELLEKEIQEHMIAHQAYESQIS 934
Cdd:COG1196 303 DIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEE-------AEEELEEAEAELAEAEEALLEAEAELA 375
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 935 SITKNMSKLEEDIKREHQDKSSVLADLTSVRElcvKLEASKDLLSRQLASKSMDYEKVLGELEDVKSEAELLKKQLSSER 1014
Cdd:COG1196 376 EAEEELEELAEELLEALRAAAELAAQLEELEE---AEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEA 452
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 2024408258 1015 LTIQNLETLLATSRDKEFQNHLTSHEKDSEIQLLKDKLTLAEGKLAI 1061
Cdd:COG1196 453 ELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEA 499
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
661-869 |
1.81e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 51.69 E-value: 1.81e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 661 EQLQRTVEDLQHRFSLKKDELQSAQEEIVKLEEKIDRLNQKSTSQDEAVNVLRSTISVLDKEKDNLQETVDEKTEKIACL 740
Cdd:COG4942 23 AEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEAQ 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 741 DDNLAN------KEKTITHLRLTLS-----ELESSTDQLKDLLSSRDREISSLRRQ---LDASHTEIAETGRVKEIALKE 806
Cdd:COG4942 103 KEELAEllralyRLGRQPPLALLLSpedflDAVRRLQYLKYLAPARREQAEELRADlaeLAALRAELEAERAELEALLAE 182
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2024408258 807 NRRLQDDLATMTRENQAVSSELEdaiREKEEMKTRVHNYITEVSRFESLIASKEKENQELLEK 869
Cdd:COG4942 183 LEEERAALEALKAERQKLLARLE---KELAELAAELAELQQEAEELEALIARLEAEAAAAAER 242
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
451-1011 |
2.65e-06 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 51.60 E-value: 2.65e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 451 KTLEDDRDYYKRELEYLQKMIKRRPSPSRRSPEKSEDLRLITRERDELQSMLDRFEKHMIEIQSNVKLLTAERDRLNILY 530
Cdd:PRK03918 165 KNLGEVIKEIKRRIERLEKFIKRTENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKELEELKEEIEELE 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 531 EQSQSELNRLR---------REAKHNLVSQSHVGEDGDASLADFRRLMAEKESLRE-KLKIQQEAANLEK--SKMQHDIS 598
Cdd:PRK03918 245 KELESLEGSKRkleekirelEERIEELKKEIEELEEKVKELKELKEKAEEYIKLSEfYEEYLDELREIEKrlSRLEEEIN 324
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 599 VLENNIQQFElercELKSTISILKERIKSLENELKlKSSKLIQTSDDSSQLKAELCSLHllNEQLQRTVEDLQHRFSLKK 678
Cdd:PRK03918 325 GIEERIKELE----EKEERLEELKKKLKELEKRLE-ELEERHELYEEAKAKKEELERLK--KRLTGLTPEKLEKELEELE 397
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 679 DELQSAQEEIVKLEEKIDRLNQKSTSQDEAVNVLRSTISVLDKEKDNLQEtvDEKTEKIACLDDNLANKEKTITHLRLTL 758
Cdd:PRK03918 398 KAKEEIEEEISKITARIGELKKEIKELKKAIEELKKAKGKCPVCGRELTE--EHRKELLEEYTAELKRIEKELKEIEEKE 475
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 759 SELESSTDQLKDLLSsRDREISSLRRQLDASHTEIAETGRVKEIALKENRRLQDDLATMTRENQAVSSELEDAIREKEEM 838
Cdd:PRK03918 476 RKLRKELRELEKVLK-KESELIKLKELAEQLKELEEKLKKYNLEELEKKAEEYEKLKEKLIKLKGEIKSLKKELEKLEEL 554
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 839 KTRVHNYITEVSRFESLIASKEKENQEL-LEKFRMLHTQAEDWEiKAHQAEGESSSIRLELLSVDTDRRHLRERVELLEK 917
Cdd:PRK03918 555 KKKLAELEKKLDELEEELAELLKELEELgFESVEELEERLKELE-PFYNEYLELKDAEKELEREEKELKKLEEELDKAFE 633
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 918 EIQEHMIAHQAYESQISSITKNMSKLE-EDIKREHQDKSSVLADLTSvrelcvKLEASKDLLsRQLASKSMDYEKVLGEL 996
Cdd:PRK03918 634 ELAETEKRLEELRKELEELEKKYSEEEyEELREEYLELSRELAGLRA------ELEELEKRR-EEIKKTLEKLKEELEER 706
|
570
....*....|....*
gi 2024408258 997 EDVKSEAELLKKQLS 1011
Cdd:PRK03918 707 EKAKKELEKLEKALE 721
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
677-869 |
2.77e-06 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 50.98 E-value: 2.77e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 677 KKDELQSAQEEIVKLEEKIDRLNQKSTSQDEAVNVLRSTISVLDKEKDNLQETVDEKTEKIACLDDNLANkektitHLRl 756
Cdd:COG3883 21 KQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERREELGE------RAR- 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 757 TLSELESSTDQLKDLLSSRD-----REISSLRRQLDASHTEIAETGRVKEIALKENRRLQDDLATMTRENQAVSSELEDA 831
Cdd:COG3883 94 ALYRSGGSVSYLDVLLGSESfsdflDRLSALSKIADADADLLEELKADKAELEAKKAELEAKLAELEALKAELEAAKAEL 173
|
170 180 190
....*....|....*....|....*....|....*...
gi 2024408258 832 IREKEEMKTRVHNYITEVSRFESLIASKEKENQELLEK 869
Cdd:COG3883 174 EAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAA 211
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
204-730 |
5.71e-06 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 50.40 E-value: 5.71e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 204 NRIQELQSEVTQLQEKLEISENGKKNYSKQVELRDKEIERLMLALDGGRSHevislesRSKSNEKLiaqlnLQVEYLQQS 283
Cdd:TIGR04523 145 TEIKKKEKELEKLNNKYNDLKKQKEELENELNLLEKEKLNIQKNIDKIKNK-------LLKLELLL-----SNLKKKIQK 212
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 284 NKELENRIQDLLDTKKNVTSEVVHLSNKNEELCQELNEIDhlaQQLERHKEIVLETADKEIGEAKEIERKDSEIQDLEET 363
Cdd:TIGR04523 213 NKSLESQISELKKQNNQLKDNIEKKQQEINEKTTEISNTQ---TQLNQLKDEQNKIKKQLSEKQKELEQNNKKIKELEKQ 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 364 ITRLKSELSSCRRQ-----NERLSEELFGKADDKENLELLLNQLEQEKQRLTEKTENfeikerelvLEIERMRLEYGIAL 438
Cdd:TIGR04523 290 LNQLKSEISDLNNQkeqdwNKELKSELKNQEKKLEEIQNQISQNNKIISQLNEQISQ---------LKKELTNSESENSE 360
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 439 GDKSPSRLDAFVKTLEDDRDYYKRELEYLQKMIKRR----PSPSRRSPEKSEDLRLITRERDELQSMLDRFEKHMIEIQS 514
Cdd:TIGR04523 361 KQRELEEKQNEIEKLKKENQSYKQEIKNLESQINDLeskiQNQEKLNQQKDEQIKKLQQEKELLEKEIERLKETIIKNNS 440
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 515 NVKLLTAERDRLNILYEqsqsELNRLRREAKHNLVSQSHVGEDGDASLADFRRLMAEKESLREKLKIQQEAANLEKSKMQ 594
Cdd:TIGR04523 441 EIKDLTNQDSVKELIIK----NLDNTRESLETQLKVLSRSINKIKQNLEQKQKELKSKEKELKKLNEEKKELEEKVKDLT 516
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 595 HDISVLENNIQQFELERCELKSTISILKERIKSLENELKlksSKLIQTSDDSSQlkAELCSLHLLNEQLQRTVEDLQHRF 674
Cdd:TIGR04523 517 KKISSLKEKIEKLESEKKEKESKISDLEDELNKDDFELK---KENLEKEIDEKN--KEIEELKQTQKSLKKKQEEKQELI 591
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*.
gi 2024408258 675 SLKKDELQSAQEEIVKLEEKIDRLNQKSTSQDEAVNVLRSTISVLDKEKDNLQETV 730
Cdd:TIGR04523 592 DQKEKEKKDLIKEIEEKEKKISSLEKELEKAKKENEKLSSIIKNIKSKKNKLKQEV 647
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
661-980 |
5.79e-06 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 50.84 E-value: 5.79e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 661 EQLQRTVEDLQHRFSLKKDELQSAQEEIVKLEEKIDRLNQKstsQDEAVNVLRSTISVLDKEKDNLQETVDEKTEKIACL 740
Cdd:TIGR02169 180 EEVEENIERLDLIIDEKRQQLERLRREREKAERYQALLKEK---REYEGYELLKEKEALERQKEAIERQLASLEEELEKL 256
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 741 DDNLANKEKTITHLRLTLSELESSTDQLKDllssrdREISSLRRQLDASHTEIAETGRVKEIALKENRRLQDDLATMTRE 820
Cdd:TIGR02169 257 TEEISELEKRLEEIEQLLEELNKKIKDLGE------EEQLRVKEKIGELEAEIASLERSIAEKERELEDAEERLAKLEAE 330
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 821 NQAVSSELEDAIREKEEMKTRVHNYITEVSRFE-------SLIASKEKENQELLEKFRMLHTQAEDWEIKAHQAEGESSS 893
Cdd:TIGR02169 331 IDKLLAEIEELEREIEEERKRRDKLTEEYAELKeeledlrAELEEVDKEFAETRDELKDYREKLEKLKREINELKRELDR 410
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 894 IRLELLSVDTDRRHLRERVELLE---KEIQEHMIAHQ----AYESQISSITKNMSKLEEDIKREHQDKSSVLADLTSVRE 966
Cdd:TIGR02169 411 LQEELQRLSEELADLNAAIAGIEakiNELEEEKEDKAleikKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQR 490
|
330
....*....|....
gi 2024408258 967 LCVKLEASKDLLSR 980
Cdd:TIGR02169 491 ELAEAEAQARASEE 504
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
629-834 |
5.87e-06 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 49.83 E-value: 5.87e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 629 ENELKLKSSKLIQTSDDSSQLKAELCSLHLLNEQLQRTVEDLQHRFSLKKDELQSAQEEIVKLEEKIDRLN--------- 699
Cdd:COG3883 15 DPQIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERReelgerara 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 700 -QKSTSQDEAVNVLRST---------ISVLDKEKDNLQETVDEKTEKIACLDDNLANKEKTITHLRLTLSELESSTDQLK 769
Cdd:COG3883 95 lYRSGGSVSYLDVLLGSesfsdfldrLSALSKIADADADLLEELKADKAELEAKKAELEAKLAELEALKAELEAAKAELE 174
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2024408258 770 DLLSSRDREISSLRRQLDASHTEIAETGRVKEIALKENRRLQDDLATMTRENQAVSSELEDAIRE 834
Cdd:COG3883 175 AQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 239
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
562-1021 |
6.05e-06 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 50.56 E-value: 6.05e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 562 LADFRRLMAEKESLREKLKIQQEAANLEKSKMQHDISVLENNIQQFELER-------CELKSTISILKERIKSLeNELKL 634
Cdd:pfam01576 105 IQDLEEQLDEEEAARQKLQLEKVTTEAKIKKLEEDILLLEDQNSKLSKERklleeriSEFTSNLAEEEEKAKSL-SKLKN 183
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 635 KSSKLIQTSDD---------------SSQLKAELCSLHLLNEQLQRTVEDLQHRFSLKKDELQSAQEEIVK-------LE 692
Cdd:pfam01576 184 KHEAMISDLEErlkkeekgrqelekaKRKLEGESTDLQEQIAELQAQIAELRAQLAKKEEELQAALARLEEetaqknnAL 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 693 EKIDRLNQKSTSQDEAVNVLRSTISVLDKEKDNLQETVDE-KTEKIACLDDNLAN------KEKTITHLRLTLSELESST 765
Cdd:pfam01576 264 KKIRELEAQISELQEDLESERAARNKAEKQRRDLGEELEAlKTELEDTLDTTAAQqelrskREQEVTELKKALEEETRSH 343
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 766 D-QLKDLLSSRDREISSLRRQLDASHTEIAETGRVKEIALKENRRLQDDLATMTREN--------------QAVSSELED 830
Cdd:pfam01576 344 EaQLQEMRQKHTQALEELTEQLEQAKRNKANLEKAKQALESENAELQAELRTLQQAKqdsehkrkklegqlQELQARLSE 423
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 831 AIREKEEMKTRVHNYITEVSRFESLIASKEKENQELLEKFRMLHTQAEDWEIKAHQAEGESSSIRLELLSVDTDRRHLRE 910
Cdd:pfam01576 424 SERQRAELAEKLSKLQSELESVSSLLNEAEGKNIKLSKDVSSLESQLQDTQELLQEETRQKLNLSTRLRQLEDERNSLQE 503
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 911 RVEllekeiqEHMIAHQAYESQISSITKNMSkleeDIKREHQDKSSVLADLTSVRElcvKLEASKDLLSRQLASKSMDYE 990
Cdd:pfam01576 504 QLE-------EEEEAKRNVERQLSTLQAQLS----DMKKKLEEDAGTLEALEEGKK---RLQRELEALTQQLEEKAAAYD 569
|
490 500 510
....*....|....*....|....*....|.
gi 2024408258 991 KVLGELEDVKSEAELLKKQLSSERLTIQNLE 1021
Cdd:pfam01576 570 KLEKTKNRLQQELDDLLVDLDHQRQLVSNLE 600
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
758-1029 |
6.75e-06 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 50.42 E-value: 6.75e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 758 LSELESSTDQLKDLLSsrDREISSLRRQLDASHTEIAETGrvKEIALKENRRLQddlATMTREnqavssELEDAIREKEE 837
Cdd:PRK02224 182 LSDQRGSLDQLKAQIE--EKEEKDLHERLNGLESELAELD--EEIERYEEQREQ---ARETRD------EADEVLEEHEE 248
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 838 MKTRVHNYITEVSRFESLIASKEKENQELLEKFRMLHTQAEDWEIKAHQAEGESSSIRLELLSVDTDRRHLRERVELLEK 917
Cdd:PRK02224 249 RREELETLEAEIEDLRETIAETEREREELAEEVRDLRERLEELEEERDDLLAEAGLDDADAEAVEARREELEDRDEELRD 328
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 918 EIQEHMIAHQAYESQISSITKNMSKLEEDIKREHQDKSSVLADLTSVRELCVKLEASKDLLSRQLASKSMDYEKVLGELE 997
Cdd:PRK02224 329 RLEECRVAAQAHNEEAESLREDADDLEERAEELREEAAELESELEEAREAVEDRREEIEELEEEIEELRERFGDAPVDLG 408
|
250 260 270
....*....|....*....|....*....|..
gi 2024408258 998 DVKSEAELLKKQLSSERLTIQNLETLLATSRD 1029
Cdd:PRK02224 409 NAEDFLEELREERDELREREAELEATLRTARE 440
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
196-802 |
7.31e-06 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 50.29 E-value: 7.31e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 196 ADLLQVADNRIQELQSEVTQLQEKLEISENGKKNYSKQVElRDKEIERLMLaldggRSHEVISLESRSKSNEKLIAqlnl 275
Cdd:PRK01156 168 YDKLKDVIDMLRAEISNIDYLEEKLKSSNLELENIKKQIA-DDEKSHSITL-----KEIERLSIEYNNAMDDYNNL---- 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 276 qveylqqsnKELENRIQDLLDTKKNVTSEVVHLSNKNEELCQELNEIDHLAqqlERHKEIVLETADKEIGEAKEIERKDS 355
Cdd:PRK01156 238 ---------KSALNELSSLEDMKNRYESEIKTAESDLSMELEKNNYYKELE---ERHMKIINDPVYKNRNYINDYFKYKN 305
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 356 EIQDLEETITRLKSELSSCRRQNERLSE---------ELFGKADDKENLELLLNQLEQEKQRLTEKTENFEIKERELVLE 426
Cdd:PRK01156 306 DIENKKQILSNIDAEINKYHAIIKKLSVlqkdyndyiKKKSRYDDLNNQILELEGYEMDYNSYLKSIESLKKKIEEYSKN 385
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 427 IERMRLEYGIALGDK--SPSRLDAFVKTLEDDRDYYKRELEYLQKMIKRRPSPSRRSPEKSEDLRL--------ITRERD 496
Cdd:PRK01156 386 IERMSAFISEILKIQeiDPDAIKKELNEINVKLQDISSKVSSLNQRIRALRENLDELSRNMEMLNGqsvcpvcgTTLGEE 465
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 497 ELQSMLDRFEKHMIEIQSNVKLLTAERDRLNILYEQSQSELNRLRREAKHNLVSQSHVGEDGDASLADFRRLMAEkesLR 576
Cdd:PRK01156 466 KSNHIINHYNEKKSRLEEKIREIEIEVKDIDEKIVDLKKRKEYLESEEINKSINEYNKIESARADLEDIKIKINE---LK 542
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 577 EKLKIQQEAANLEKSKmqhDISVLENNIQQFeLERCELKSTISIlkERIKSLENElklKSSKLIQTSDDSSQLKAELCSL 656
Cdd:PRK01156 543 DKHDKYEEIKNRYKSL---KLEDLDSKRTSW-LNALAVISLIDI--ETNRSRSNE---IKKQLNDLESRLQEIEIGFPDD 613
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 657 HLLNEQLQRTVEDLQHRFSLKKDELQSAQEEIVKLEEKIDRLNQKSTsqdeavnvlrstisvldkEKDNLQETVDEKTEK 736
Cdd:PRK01156 614 KSYIDKSIREIENEANNLNNKYNEIQENKILIEKLRGKIDNYKKQIA------------------EIDSIIPDLKEITSR 675
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2024408258 737 IACLDDNLANKEKTITHLRLTLSELESSTDQLKDLLSSRDREISSLRRQLDASHTEIAETGRVKEI 802
Cdd:PRK01156 676 INDIEDNLKKSRKALDDAKANRARLESTIEILRTRINELSDRINDINETLESMKKIKKAIGDLKRL 741
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
585-789 |
8.86e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 49.38 E-value: 8.86e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 585 AANLEKSKMQHDISVLENNIQQFELERCELKSTISILKERIKSLENELKLKSSKLIQTSDDSSQLKAELCSLHLLNEQLQ 664
Cdd:COG4942 17 AQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELR 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 665 RTVEDLQH--------------------------------RFSLKKDELQSAQEEIVKLEEKIDRLNQKSTSQDEAVNVL 712
Cdd:COG4942 97 AELEAQKEelaellralyrlgrqpplalllspedfldavrRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAEL 176
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2024408258 713 RSTISVLDKEKDNLQETVDEKTEKIACLDDNLANKEKTIThlrltlsELESSTDQLKDLLSSRDREISSLRRQLDAS 789
Cdd:COG4942 177 EALLAELEEERAALEALKAERQKLLARLEKELAELAAELA-------ELQQEAEELEALIARLEAEAAAAAERTPAA 246
|
|
| Cast |
pfam10174 |
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part ... |
572-921 |
9.92e-06 |
|
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion. The C-terminus is a PDZ-binding motif that binds directly to RIM (a small G protein Rab-3A effector). The family also contains four coiled-coil domains.
Pssm-ID: 431111 [Multi-domain] Cd Length: 766 Bit Score: 49.82 E-value: 9.92e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 572 KESLREKLKIQQEAANLEKSKMQHDISVLENNIQQFELERCELKSTISILKERIKSLENELKLKSSKLIQTSDDSSQLKA 651
Cdd:pfam10174 301 KESELLALQTKLETLTNQNSDCKQHIEVLKESLTAKEQRAAILQTEVDALRLRLEEKESFLNKKTKQLQDLTEEKSTLAG 380
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 652 ELCSLHLLNEQLQRTVEDLQHRFSLKKDELQSAQEEIVKLEEKIDRLNQKSTSQDEAVNVLRSTISVLDKEKDNLQETVD 731
Cdd:pfam10174 381 EIRDLKDMLDVKERKINVLQKKIENLQEQLRDKDKQLAGLKERVKSLQTDSSNTDTALTTLEEALSEKERIIERLKEQRE 460
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 732 ----EKTEKIACLDDNLANKEKTITHLRLTLSELESSTDQLKDLLSS---------------------RDREISSLRRQL 786
Cdd:pfam10174 461 redrERLEELESLKKENKDLKEKVSALQPELTEKESSLIDLKEHASSlassglkkdsklksleiaveqKKEECSKLENQL 540
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 787 DASHtEIAETGRVKEIALKENRRLQDDLATMTRENQAVSSELEDAIREKEEMKTRVHNYITEVSRFESLIASKEKENQEL 866
Cdd:pfam10174 541 KKAH-NAEEAVRTNPEINDRIRLLEQEVARYKEESGKAQAEVERLLGILREVENEKNDKDKKIAELESLTLRQMKEQNKK 619
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 2024408258 867 LEKFRMLHTQaedwEIKAHQAEGESSSIRLELLSVDTDRRHLRERVELLEKEIQE 921
Cdd:pfam10174 620 VANIKHGQQE----MKKKGAQLLEEARRREDNLADNSQQLQLEELMGALEKTRQE 670
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
205-951 |
1.19e-05 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 49.66 E-value: 1.19e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 205 RIQELQSEVTQLQEKLEISENGKKNYSKQVELRDKEIERLMLALDGGRSHEVISLESRSKSNEKLIAQLNLQVEYLQQSN 284
Cdd:TIGR00606 263 KIMKLDNEIKALKSRKKQMEKDNSELELKMEKVFQGTDEQLNDLYHNHQRTVREKERELVDCQRELEKLNKERRLLNQEK 342
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 285 KELENRIQDLLDTKKNVTSEVVHLSNKNEELC--QELNEIDHLAQQLERHKEIVLETADKEIGEAKEIERKDSEIQDLE- 361
Cdd:TIGR00606 343 TELLVEQGRLQLQADRHQEHIRARDSLIQSLAtrLELDGFERGPFSERQIKNFHTLVIERQEDEAKTAAQLCADLQSKEr 422
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 362 ---ETITRLKSELSSCRRQNERLSEELFGKADDKENLELLLNQLEQEKQRLTEKTENFEIKERELVLEIERMRLEYGIAl 438
Cdd:TIGR00606 423 lkqEQADEIRDEKKGLGRTIELKKEILEKKQEELKFVIKELQQLEGSSDRILELDQELRKAERELSKAEKNSLTETLKK- 501
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 439 GDKSPSRLDAFVKTLEDDRDYYKRELEYLQKMIKRRPSPSRRSPEKSEDLRLI-TRERDELQSMLDRF------EKHMIE 511
Cdd:TIGR00606 502 EVKSLQNEKADLDRKLRKLDQEMEQLNHHTTTRTQMEMLTKDKMDKDEQIRKIkSRHSDELTSLLGYFpnkkqlEDWLHS 581
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 512 IQSNVKLLTAERDRLNILYEQSQSELNRLRREAKHNLVSQSHVGED------GDASLADFRRLMAEKESLREKLKIQQEA 585
Cdd:TIGR00606 582 KSKEINQTRDRLAKLNKELASLEQNKNHINNELESKEEQLSSYEDKlfdvcgSQDEESDLERLKEEIEKSSKQRAMLAGA 661
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 586 ANL------------------------EKSKMQHDISVLENNIQQFELERCELKSTISILKERIKSL-------ENELKL 634
Cdd:TIGR00606 662 TAVysqfitqltdenqsccpvcqrvfqTEAELQEFISDLQSKLRLAPDKLKSTESELKKKEKRRDEMlglapgrQSIIDL 741
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 635 KSSKLIQTSDDSSQLKAELCSLHLLNEQLQRTVEDLQHRFSLKKDEL------QSAQEEIVKLEEKIDRLNQKSTSQDea 708
Cdd:TIGR00606 742 KEKEIPELRNKLQKVNRDIQRLKNDIEEQETLLGTIMPEEESAKVCLtdvtimERFQMELKDVERKIAQQAAKLQGSD-- 819
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 709 vnvLRSTISVLDKEKDNLQETVDEKTEKIACLDDNLANKEKTITHLRLTLSELESSTDQLKDLLSSRD----------RE 778
Cdd:TIGR00606 820 ---LDRTVQQVNQEKQEKQHELDTVVSKIELNRKLIQDQQEQIQHLKSKTNELKSEKLQIGTNLQRRQqfeeqlvelsTE 896
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 779 ISSLRRQLDASHTEIAETGRVKEIALKENRRLQDDLATMTRENQAVSSELEDAIREKEEMKTRVHNYITEVSrfESLIAS 858
Cdd:TIGR00606 897 VQSLIREIKDAKEQDSPLETFLEKDQQEKEELISSKETSNKKAQDKVNDIKEKVKNIHGYMKDIENKIQDGK--DDYLKQ 974
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 859 KEKENQELLEKFRMLHTQAEDWE--IKAHQAEGESSSIRLELLSVDTDRRHLRERVELLEKEIQEHMiaHQAYESQISSI 936
Cdd:TIGR00606 975 KETELNTVNAQLEECEKHQEKINedMRLMRQDIDTQKIQERWLQDNLTLRKRENELKEVEEELKQHL--KEMGQMQVLQM 1052
|
810
....*....|....*...
gi 2024408258 937 TKNMSKLEED---IKREH 951
Cdd:TIGR00606 1053 KQEHQKLEENidlIKRNH 1070
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
313-819 |
1.47e-05 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 49.13 E-value: 1.47e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 313 EELCQELNEIDHLAQQLERHKEiVLETADKEIGE----AKEIERKDSEIQDLEETITRLKSELSSCRRQNERLSEELFGK 388
Cdd:PRK01156 152 KKILDEILEINSLERNYDKLKD-VIDMLRAEISNidylEEKLKSSNLELENIKKQIADDEKSHSITLKEIERLSIEYNNA 230
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 389 ADDKENLELLLNQLEQEKQrlTEKTENFEIKERELVLEIERMRLEYGIALGDKSPSRL-DAFVKTLEDDRDY--YKRELE 465
Cdd:PRK01156 231 MDDYNNLKSALNELSSLED--MKNRYESEIKTAESDLSMELEKNNYYKELEERHMKIInDPVYKNRNYINDYfkYKNDIE 308
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 466 YLQKMIKRRPSPSRRSPEKSEDLRLITRERDELQSMLDRFE--KHMI----EIQSNVKLLTAERDRLNILYEQSQSELNR 539
Cdd:PRK01156 309 NKKQILSNIDAEINKYHAIIKKLSVLQKDYNDYIKKKSRYDdlNNQIleleGYEMDYNSYLKSIESLKKKIEEYSKNIER 388
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 540 LRREAKHNLVSQSHVGEDGDASLADFRR-----------LMAEKESLREKLKIQQEAANL-------------------- 588
Cdd:PRK01156 389 MSAFISEILKIQEIDPDAIKKELNEINVklqdisskvssLNQRIRALRENLDELSRNMEMlngqsvcpvcgttlgeeksn 468
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 589 --------EKSKMQHDISVLENNIQQFELERCELKSTISIL-KERIKSLENELKLKSSKLIQTSDD-------------S 646
Cdd:PRK01156 469 hiinhyneKKSRLEEKIREIEIEVKDIDEKIVDLKKRKEYLeSEEINKSINEYNKIESARADLEDIkikinelkdkhdkY 548
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 647 SQLKAELCSLHLLNEQLQRT--VEDLQHRFSLKKDELQSAQEEIVK-LEEKIDRLNQKSTSQDEAVNVLRSTISVLDKEK 723
Cdd:PRK01156 549 EEIKNRYKSLKLEDLDSKRTswLNALAVISLIDIETNRSRSNEIKKqLNDLESRLQEIEIGFPDDKSYIDKSIREIENEA 628
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 724 DNLQETVDEKTEKIACLDDnlanKEKTITHLRLTLSELESSTDQLKDL---LSSRDREISSLRRQLDASHTEIAETGRVK 800
Cdd:PRK01156 629 NNLNNKYNEIQENKILIEK----LRGKIDNYKKQIAEIDSIIPDLKEItsrINDIEDNLKKSRKALDDAKANRARLESTI 704
|
570
....*....|....*....
gi 2024408258 801 EIALKENRRLQDDLATMTR 819
Cdd:PRK01156 705 EILRTRINELSDRINDINE 723
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
44-696 |
1.56e-05 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 49.27 E-value: 1.56e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 44 TESLRSAKLSAGKIEKECSNYDAIIEpykTETAKLTRENNELHLEVLKLK--EQSDHHIKDLKASLRRAENE--AADLRF 119
Cdd:TIGR00606 418 QSKERLKQEQADEIRDEKKGLGRTIE---LKKEILEKKQEELKFVIKELQqlEGSSDRILELDQELRKAERElsKAEKNS 494
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 120 LNNQYVHKIKLLEKESKAKTEKIQQLQEKNLQAVVQTPGgRKRNIPFRRQRMQIDQPV------PPSAVSAYPVPQPEDP 193
Cdd:TIGR00606 495 LTETLKKEVKSLQNEKADLDRKLRKLDQEMEQLNHHTTT-RTQMEMLTKDKMDKDEQIrkiksrHSDELTSLLGYFPNKK 573
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 194 YIADLLQVADNRIQELQSEVTQLQEKLEISENGKKNYSKQVELRDKEIERL---MLALDGGRSHEVI------SLESRSK 264
Cdd:TIGR00606 574 QLEDWLHSKSKEINQTRDRLAKLNKELASLEQNKNHINNELESKEEQLSSYedkLFDVCGSQDEESDlerlkeEIEKSSK 653
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 265 SNEKLIAQLNLQVEYLQQSNKELEN---RIQDLLDTKKNVTSEVVHLSNKNEELCQELNEIDHLAQQLERHKEIVLETAD 341
Cdd:TIGR00606 654 QRAMLAGATAVYSQFITQLTDENQSccpVCQRVFQTEAELQEFISDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGLAP 733
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 342 keiGEAKEIERKDSEIQDLEETITRLKSELSSCRRQNERlSEELFGKADDKENLELLLNQLEQEKQRLTEKTENFEIKER 421
Cdd:TIGR00606 734 ---GRQSIIDLKEKEIPELRNKLQKVNRDIQRLKNDIEE-QETLLGTIMPEEESAKVCLTDVTIMERFQMELKDVERKIA 809
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 422 ELVLEIERMRleygialGDKSPSRLDAFVKTLEDDRDYYKRELEYLQKMIKRRPspsrrspeksedlrlitRERDELQSM 501
Cdd:TIGR00606 810 QQAAKLQGSD-------LDRTVQQVNQEKQEKQHELDTVVSKIELNRKLIQDQQ-----------------EQIQHLKSK 865
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 502 LDRFEKHMIEIQSNVKLLTAERDRLNILYEQSQsELNRLRREAKHNLVSQSHVGEDgdaslaDFRRLMAEKESLREKLKI 581
Cdd:TIGR00606 866 TNELKSEKLQIGTNLQRRQQFEEQLVELSTEVQ-SLIREIKDAKEQDSPLETFLEK------DQQEKEELISSKETSNKK 938
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 582 QQEAANLEKSKMQHDI---SVLENNIQ--------QFELERCELKSTISILKERIKSLENELKLKSSKLIQTSDDSSQLK 650
Cdd:TIGR00606 939 AQDKVNDIKEKVKNIHgymKDIENKIQdgkddylkQKETELNTVNAQLEECEKHQEKINEDMRLMRQDIDTQKIQERWLQ 1018
|
650 660 670 680
....*....|....*....|....*....|....*....|....*.
gi 2024408258 651 AELCSLHLLNEQLQRTVEDLQHRFSLKKDELQSAQEEIVKLEEKID 696
Cdd:TIGR00606 1019 DNLTLRKRENELKEVEEELKQHLKEMGQMQVLQMKQEHQKLEENID 1064
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
621-827 |
2.10e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 48.22 E-value: 2.10e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 621 LKERIKSLENELKLKSSKLIQTSDDSSQLKAELCSLHLLNEQLQRTVEDLQHRFSLKKDELQSAQEEIVKLEEKIDRLNQ 700
Cdd:COG4942 25 AEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEAQKE 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 701 K---------STSQDEAVNVLRSTISVLDKEK---------DNLQETVDEKTEKIACLDDNLANKEKTITHLRLTLSELE 762
Cdd:COG4942 105 ElaellralyRLGRQPPLALLLSPEDFLDAVRrlqylkylaPARREQAEELRADLAELAALRAELEAERAELEALLAELE 184
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2024408258 763 SSTDQLKDLLSSRDREISSLRRQLDASHTEIAEtgrvkeiALKENRRLQDDLATMTRENQAVSSE 827
Cdd:COG4942 185 EERAALEALKAERQKLLARLEKELAELAAELAE-------LQQEAEELEALIARLEAEAAAAAER 242
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
199-377 |
2.54e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 47.84 E-value: 2.54e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 199 LQVADNRIQELQSEVTQLQEKLEISENGKKNYSKQVELRDKEIERLMLALDGGRSHEVISLESRSKSneklIAQLNLQVE 278
Cdd:COG4942 64 IAALARRIRALEQELAALEAELAELEKEIAELRAELEAQKEELAELLRALYRLGRQPPLALLLSPED----FLDAVRRLQ 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 279 YLQQSNKELENRIQDLLDTKKNVTSEVVHLSNKNEELCQELNEIDH----LAQQLERHKEIVLETADKEIGEAKEIERKD 354
Cdd:COG4942 140 YLKYLAPARREQAEELRADLAELAALRAELEAERAELEALLAELEEeraaLEALKAERQKLLARLEKELAELAAELAELQ 219
|
170 180
....*....|....*....|...
gi 2024408258 355 SEIQDLEETITRLKSELSSCRRQ 377
Cdd:COG4942 220 QEAEELEALIARLEAEAAAAAER 242
|
|
| COG2433 |
COG2433 |
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only]; |
235-385 |
3.00e-05 |
|
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 47.93 E-value: 3.00e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 235 ELRDKEIERLMLALDGGRSHEVISLESrsksNEKLIAQLNLQVEYLQQSNKELENRIQDLLDTkknvtsevvhlsnkNEE 314
Cdd:COG2433 384 ELIEKELPEEEPEAEREKEHEERELTE----EEEEIRRLEEQVERLEAEVEELEAELEEKDER--------------IER 445
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2024408258 315 LCQELNEIdhlaqQLERHKEIvletadkeigeakeieRKDSEIQDLEETITRLKSELSSCRRQNERLSEEL 385
Cdd:COG2433 446 LERELSEA-----RSEERREI----------------RKDREISRLDREIERLERELEEERERIEELKRKL 495
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
455-684 |
3.13e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 47.45 E-value: 3.13e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 455 DDRDYYKRELEYLQKMIKRRPSPSRRSPEK----SEDLRLITRERDELQSMLDRFEKHMIEIQSNVKLLTAERDRLNILY 530
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKELAALKKEekalLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAEL 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 531 EQSQSELNRLRREA-KHNLVSQSHVGEDGDASLADFRRLMAEKESLREklkIQQEAANLEKskmqhDISVLENNIQQFEL 609
Cdd:COG4942 100 EAQKEELAELLRALyRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPA---RREQAEELRA-----DLAELAALRAELEA 171
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2024408258 610 ERCELKSTISILKERIKSLENELKLKSSKLIQTSDDSSQLKAELCSLHLLNEQLQRTVEDLQHRFSLKKDELQSA 684
Cdd:COG4942 172 ERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTPAA 246
|
|
| COG5022 |
COG5022 |
Myosin heavy chain [General function prediction only]; |
626-1052 |
4.44e-05 |
|
Myosin heavy chain [General function prediction only];
Pssm-ID: 227355 [Multi-domain] Cd Length: 1463 Bit Score: 47.77 E-value: 4.44e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 626 KSLENELKLKSSKLIQTSDDSSQLKAELCSLHLLNEQLQRTVedlqhrfslkKDELQSAQEEIVKLEEKIDRLNQKSTSQ 705
Cdd:COG5022 785 RLVDYELKWRLFIKLQPLLSLLGSRKEYRSYLACIIKLQKTI----------KREKKLRETEEVEFSLKAEVLIQKFGRS 854
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 706 DEAVNVLRSTI--SVLDKEKDNLQETVDEKTEKiacLDDNlankeKTITHLRLTLSELESSTDQLKDLLSSRDREISSLR 783
Cdd:COG5022 855 LKAKKRFSLLKkeTIYLQSAQRVELAERQLQEL---KIDV-----KSISSLKLVNLELESEIIELKKSLSSDLIENLEFK 926
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 784 RQLDASHTEIAETGRVKEIALKE---NRRLQDDLATMTRENQAvSSELEDAIREKEEMKTRVHNYITEVSRFESLIASKE 860
Cdd:COG5022 927 TELIARLKKLLNNIDLEEGPSIEyvkLPELNKLHEVESKLKET-SEEYEDLLKKSTILVREGNKANSELKNFKKELAELS 1005
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 861 KENQELLEKFRML-HTQAEDWEIKAHQAEGES-SSIRLELLSVDTDRRHLRERVELLEKEIQE--------HMIAHQAYE 930
Cdd:COG5022 1006 KQYGALQESTKQLkELPVEVAELQSASKIISSeSTELSILKPLQKLKGLLLLENNQLQARYKAlklrrensLLDDKQLYQ 1085
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 931 SQissITKNMSKLEEDIKREHQDKSSVLadLTSVRELCVKLEASKDLLSRQ---LASKSMDYEKVLGELEDVKSEAELLK 1007
Cdd:COG5022 1086 LE---STENLLKTINVKDLEVTNRNLVK--PANVLQFIVAQMIKLNLLQEIskfLSQLVNTLEPVFQKLSVLQLELDGLF 1160
|
410 420 430 440
....*....|....*....|....*....|....*....|....*...
gi 2024408258 1008 KQLSSERLTiqNLETLLATSRDKEFQNHLT---SHEKDSEIQLLKDKL 1052
Cdd:COG5022 1161 WEANLEALP--SPPPFAALSEKRLYQSALYdekSKLSSSEVNDLKNEL 1206
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
255-468 |
4.65e-05 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 47.60 E-value: 4.65e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 255 EVISLESRSKSNEKLIAQLNLQVEYLQQSnKELENRIQDLLDTKKNVTSEVVHLSNKNEELcQEL----NEIDHLAQQLE 330
Cdd:COG4913 618 ELAELEEELAEAEERLEALEAELDALQER-REALQRLAEYSWDEIDVASAEREIAELEAEL-ERLdassDDLAALEEQLE 695
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 331 RHKEIvLETADKEIGEAK-EIERKDSEIQDLEETITRLKSELSSCRR-----QNERLsEELFGKADDKENLELLLNQLEQ 404
Cdd:COG4913 696 ELEAE-LEELEEELDELKgEIGRLEKELEQAEEELDELQDRLEAAEDlarleLRALL-EERFAAALGDAVERELRENLEE 773
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2024408258 405 EKQRLTEKTENfeiKERELVLEIERMRLEYGIALGDkspsrLDAFVktleDDRDYYKRELEYLQ 468
Cdd:COG4913 774 RIDALRARLNR---AEEELERAMRAFNREWPAETAD-----LDADL----ESLPEYLALLDRLE 825
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
570-767 |
1.24e-04 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 45.59 E-value: 1.24e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 570 AEKESLREKLKIQQEAANLEKSKMQHDISVLENNIQQFELERCELKSTISILKERIKSLENELKLKSSKLI-------QT 642
Cdd:COG3883 19 QAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERREELGeraralyRS 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 643 SDDSSQLKAelcslhLLNeqlQRTVEDLQHRFSLKKDELQSAQEEIVKLEEKIDRLNQKSTSQDEAVNVLRSTISVLDKE 722
Cdd:COG3883 99 GGSVSYLDV------LLG---SESFSDFLDRLSALSKIADADADLLEELKADKAELEAKKAELEAKLAELEALKAELEAA 169
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 2024408258 723 KDNLQETVDEKTEKIACLDDNLANKEKTITHLRLTLSELESSTDQ 767
Cdd:COG3883 170 KAELEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAA 214
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
596-1004 |
1.26e-04 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 46.05 E-value: 1.26e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 596 DISVLENNIQQFELERCELKSTISILKERIKSLENELKLKSSKLIQTSDDSSQLKAELCSLHLLNEQLQRTVEDLQHRFS 675
Cdd:PRK01156 184 NIDYLEEKLKSSNLELENIKKQIADDEKSHSITLKEIERLSIEYNNAMDDYNNLKSALNELSSLEDMKNRYESEIKTAES 263
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 676 lkkdELQSAQEEIVKLEEKIDRLNQKSTSqdeAVNVLRSTIsvldKEKDNLQETVDEKTEKIACLDDNLANKEKTIThlr 755
Cdd:PRK01156 264 ----DLSMELEKNNYYKELEERHMKIIND---PVYKNRNYI----NDYFKYKNDIENKKQILSNIDAEINKYHAIIK--- 329
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 756 lTLSELESSTDQLKDLLSSRD---REISSLRRQLDASHTEIAETGRVKEIALKENRRLQDDLATMTRENQAVSSELEDAI 832
Cdd:PRK01156 330 -KLSVLQKDYNDYIKKKSRYDdlnNQILELEGYEMDYNSYLKSIESLKKKIEEYSKNIERMSAFISEILKIQEIDPDAIK 408
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 833 REKEEMKTRVHNYITEVSRFESLIASKEKENQELLEKFRMLHTQA------------------EDWEIKAHQAEGESSSI 894
Cdd:PRK01156 409 KELNEINVKLQDISSKVSSLNQRIRALRENLDELSRNMEMLNGQSvcpvcgttlgeeksnhiiNHYNEKKSRLEEKIREI 488
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 895 RLELLSVDTDRRHLRERVELLEKEIQEHMIahqAYESQISSITKNMSKLEEDIKR-----------EHQDKSSVLADLTS 963
Cdd:PRK01156 489 EIEVKDIDEKIVDLKKRKEYLESEEINKSI---NEYNKIESARADLEDIKIKINElkdkhdkyeeiKNRYKSLKLEDLDS 565
|
410 420 430 440
....*....|....*....|....*....|....*....|..
gi 2024408258 964 VRELCVKLEASKDLLS-RQLASKSMDYEKVLGELEDVKSEAE 1004
Cdd:PRK01156 566 KRTSWLNALAVISLIDiETNRSRSNEIKKQLNDLESRLQEIE 607
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
635-1010 |
1.34e-04 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 46.37 E-value: 1.34e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 635 KSSKLIQTSDDSSQLKAELCSLHLLNEQLQRTVEDLQHRFSLKKDELQSAQEEIVK-LEEKIDRLNQKSTSQDEAVNVLR 713
Cdd:pfam12128 242 EFTKLQQEFNTLESAELRLSHLHFGYKSDETLIASRQEERQETSAELNQLLRTLDDqWKEKRDELNGELSAADAAVAKDR 321
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 714 STISVLDKEK------------------DNLQETVDEKTEKIACLDDNLANKEKTITHLRLTLSE-----LESSTDQLKD 770
Cdd:pfam12128 322 SELEALEDQHgafldadietaaadqeqlPSWQSELENLEERLKALTGKHQDVTAKYNRRRSKIKEqnnrdIAGIKDKLAK 401
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 771 LLSSRDREI-----------SSLRRQLDASHTEIAETGRVKEIALKENRRLQDDlATMTRE---NQAVSSELEDAIREKE 836
Cdd:pfam12128 402 IREARDRQLavaeddlqaleSELREQLEAGKLEFNEEEYRLKSRLGELKLRLNQ-ATATPElllQLENFDERIERAREEQ 480
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 837 E---------------MKTRVHNYITEVSRFESLIASKEKENQELLEK--------FRMLHTQAEDW------------- 880
Cdd:pfam12128 481 EaanaeverlqselrqARKRRDQASEALRQASRRLEERQSALDELELQlfpqagtlLHFLRKEAPDWeqsigkvispell 560
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 881 -------EIKAHQAEGESS--SIRLELLSVDTDRRH-----LRERVELLEKEIQEHMIAHQAYESQISSITK---NMSKL 943
Cdd:pfam12128 561 hrtdldpEVWDGSVGGELNlyGVKLDLKRIDVPEWAaseeeLRERLDKAEEALQSAREKQAAAEEQLVQANGeleKASRE 640
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2024408258 944 EEDIKREHQDkssvlADLTsVRELCVKLEASKDLLSRQLASKSmdyEKVLGELEDVKSEAELLKKQL 1010
Cdd:pfam12128 641 ETFARTALKN-----ARLD-LRRLFDEKQSEKDKKNKALAERK---DSANERLNSLEAQLKQLDKKH 698
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
205-707 |
1.51e-04 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 46.12 E-value: 1.51e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 205 RIQELQSEVTQLQEKLEISENGKKNYSKQVELRDKEI-ERLMLALDGGRSHEVISLESRSKSNEKLIAQLNLQVE----- 278
Cdd:TIGR00618 380 HIHTLQQQKTTLTQKLQSLCKELDILQREQATIDTRTsAFRDLQGQLAHAKKQQELQQRYAELCAAAITCTAQCEkleki 459
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 279 YLQQSNKELENRIQdLLDTKKNVTSEVVHLSNKNEELCQELNEIDHLAQQLERHKEIVLETADKEIGEAKEIERKDSEIQ 358
Cdd:TIGR00618 460 HLQESAQSLKEREQ-QLQTKEQIHLQETRKKAVVLARLLELQEEPCPLCGSCIHPNPARQDIDNPGPLTRRMQRGEQTYA 538
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 359 DLEETITRLKSELSSCRRQNERLSEELFGKADDKENLELLLNQLEQEKQRLTEKTENFEiKERELVLEIERMRLEYGIAL 438
Cdd:TIGR00618 539 QLETSEEDVYHQLTSERKQRASLKEQMQEIQQSFSILTQCDNRSKEDIPNLQNITVRLQ-DLTEKLSEAEDMLACEQHAL 617
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 439 GDKSPSRLDAFVKTLEDDRDYYKRELEYLQKMIKRRPSPSRRSPEKSEDLRLITRERDELQSMLDRFEKHMIEIQSNVKL 518
Cdd:TIGR00618 618 LRKLQPEQDLQDVRLHLQQCSQELALKLTALHALQLTLTQERVREHALSIRVLPKELLASRQLALQKMQSEKEQLTYWKE 697
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 519 LTAERDRLNILYEQSQSELNRLRREAKHNLVS-QSHVGEDGDASLADFRRLMAEKESLREKLKIQQEAANLEK------- 590
Cdd:TIGR00618 698 MLAQCQTLLRELETHIEEYDREFNEIENASSSlGSDLAAREDALNQSLKELMHQARTVLKARTEAHFNNNEEVtaalqtg 777
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 591 SKMQHDISVLENNIQQFELERCELKSTISILKERIKSLENELKLKSSKLIQTSDDSSQLKAEL-CSLHLLNEQLQRTVED 669
Cdd:TIGR00618 778 AELSHLAAEIQFFNRLREEDTHLLKTLEAEIGQEIPSDEDILNLQCETLVQEEEQFLSRLEEKsATLGEITHQLLKYEEC 857
|
490 500 510
....*....|....*....|....*....|....*...
gi 2024408258 670 LQhrfslKKDELQSAQEEIVKLEEKIDRLNQKSTSQDE 707
Cdd:TIGR00618 858 SK-----QLAQLTQEQAKIIQLSDKLNGINQIKIQFDG 890
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
702-921 |
1.64e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 45.14 E-value: 1.64e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 702 STSQDEAVNVLRSTISVLDKEKDNLQETVDEKTEKIACLDDNLANKEKTITHLRLTLSELESSTDQLKDLLSSRDREISS 781
Cdd:COG4942 15 AAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAE 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 782 LRRQLDASHTEIAE-------TGRVKEIALKENRRLQDDLATMTRENQAVSSELEDAIREKEEMKTRVHNYITEVsrfES 854
Cdd:COG4942 95 LRAELEAQKEELAEllralyrLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAEL---EA 171
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2024408258 855 LIASKEKENQELLEKFRMLHTQAEDWEIKAHQAEGESSSIRLELLSVDTDRRHLRERVELLEKEIQE 921
Cdd:COG4942 172 ERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAA 238
|
|
| PRK09039 |
PRK09039 |
peptidoglycan -binding protein; |
711-842 |
2.06e-04 |
|
peptidoglycan -binding protein;
Pssm-ID: 181619 [Multi-domain] Cd Length: 343 Bit Score: 44.96 E-value: 2.06e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 711 VLRSTISVLDKEKDNLQETVDEKTEKIACLDDNLANKEKTITHLRLTLSELESSTDQLKDLLSSRDREISSLRRQLDASH 790
Cdd:PRK09039 43 FLSREISGKDSALDRLNSQIAELADLLSLERQGNQDLQDSVANLRASLSAAEAERSRLQALLAELAGAGAAAEGRAGELA 122
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|..
gi 2024408258 791 TEIAETGRVKEIALKENRRLQDDLATMTRENQAVSSELEDAIREKEEMKTRV 842
Cdd:PRK09039 123 QELDSEKQVSARALAQVELLNQQIAALRRQLAALEAALDASEKRDRESQAKI 174
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
506-844 |
2.16e-04 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 45.50 E-value: 2.16e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 506 EKHMIEIQSNVKLLTAERDRLNILYEQSQSELNRLRREAKHNLVSQSHVgEDGDASLADFRRLMAEKEslREKLKIQQEA 585
Cdd:pfam17380 281 QKAVSERQQQEKFEKMEQERLRQEKEEKAREVERRRKLEEAEKARQAEM-DRQAAIYAEQERMAMERE--RELERIRQEE 357
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 586 ANLEKSKMQHDisvlenniqqfelercELKSTISILKErIKSLENELKLKSSKLIQTSDDSSQLKaelcslhLLNEQLQR 665
Cdd:pfam17380 358 RKRELERIRQE----------------EIAMEISRMRE-LERLQMERQQKNERVRQELEAARKVK-------ILEEERQR 413
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 666 TV-EDLQHRFSLKKDELQSAQEEIVKLEEK----IDRLNQKSTSQDEAVNVLRSTISVLDKEKDNLQEtvdEKTEKIACL 740
Cdd:pfam17380 414 KIqQQKVEMEQIRAEQEEARQREVRRLEEErareMERVRLEEQERQQQVERLRQQEEERKRKKLELEK---EKRDRKRAE 490
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 741 DDNLANKEKTITHLRLTLSELESSTDQLKDLLSSRDREISSLRRQldashtEIAETGRVKEIALKENRRLQDDLATMTRE 820
Cdd:pfam17380 491 EQRRKILEKELEERKQAMIEEERKRKLLEKEMEERQKAIYEEERR------REAEEERRKQQEMEERRRIQEQMRKATEE 564
|
330 340
....*....|....*....|....
gi 2024408258 821 NqavsSELEDAIREKEEMKTRVHN 844
Cdd:pfam17380 565 R----SRLEAMEREREMMRQIVES 584
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
196-433 |
2.26e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 44.75 E-value: 2.26e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 196 ADLLQVADNRIQELQSEVTQLQEKLEISENGKKNYSKQVELRDKEIERLmlaldggrSHEVISLESRSKSNEKLIAQLNL 275
Cdd:COG4942 19 ADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAAL--------ARRIRALEQELAALEAELAELEK 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 276 QVEYLQQSNKELENRIQDLLDT--KKNVTSEVVHLSNKNEelcqelneidhlAQQLERHKEIVLETADKEIGEAKEIERK 353
Cdd:COG4942 91 EIAELRAELEAQKEELAELLRAlyRLGRQPPLALLLSPED------------FLDAVRRLQYLKYLAPARREQAEELRAD 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 354 DSEIQDLEETITRLKSELSSCRRQNERLSEELfgkADDKENLELLLNQLEQEKQRLTEKTENFEIKERELVLEIERMRLE 433
Cdd:COG4942 159 LAELAALRAELEAERAELEALLAELEEERAAL---EALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAE 235
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
588-912 |
2.34e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 45.29 E-value: 2.34e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 588 LEKSKMQHDISVLENNIQQFElercELKSTISILKERIKSLEnELKLKSSKLIQTSDDSSQLKAELcslhllneqLQRTV 667
Cdd:COG4913 218 LEEPDTFEAADALVEHFDDLE----RAHEALEDAREQIELLE-PIRELAERYAAARERLAELEYLR---------AALRL 283
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 668 EDLQHRFSLKKDELQSAQEEIVKLEEKIDRLnqkstsqdeavnvlrstisvlDKEKDNLQETVDEKTEKIACLD-DNLAN 746
Cdd:COG4913 284 WFAQRRLELLEAELEELRAELARLEAELERL---------------------EARLDALREELDELEAQIRGNGgDRLEQ 342
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 747 KEKTITHLRLTLSELESSTDQLKDLLSSRDREISSLRRQLDASHTEIAETgrvKEIALKENRRLQDDLATMTRENQAVSS 826
Cdd:COG4913 343 LEREIERLERELEERERRRARLEALLAALGLPLPASAEEFAALRAEAAAL---LEALEEELEALEEALAEAEAALRDLRR 419
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 827 ELEDAIREKEEMKTRVHNYITEVSRFESLIAS--KEKENQ-----ELLEkfrmLHTQAEDWEiKAhqAEGESSSIRLELL 899
Cdd:COG4913 420 ELRELEAEIASLERRKSNIPARLLALRDALAEalGLDEAElpfvgELIE----VRPEEERWR-GA--IERVLGGFALTLL 492
|
330 340
....*....|....*....|...
gi 2024408258 900 sVDT----------DRRHLRERV 912
Cdd:COG4913 493 -VPPehyaaalrwvNRLHLRGRL 514
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
613-1031 |
2.37e-04 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 45.44 E-value: 2.37e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 613 ELKSTISILKERIKSLENELKLKSSKLIQTSDDSSQLKAELCSLhllnEQLQRTVEDLQHRFSLKKDELQSAQEEIVKLE 692
Cdd:PRK03918 190 NIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKEL----EELKEEIEELEKELESLEGSKRKLEEKIRELE 265
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 693 EKIDRLNQKSTSQDEAVNVLRStISVLDKEKDNLQETVDEKTEKIACLDDNLANKEKTITHLRLTLSELESSTDQLKDLL 772
Cdd:PRK03918 266 ERIEELKKEIEELEEKVKELKE-LKEKAEEYIKLSEFYEEYLDELREIEKRLSRLEEEINGIEERIKELEEKEERLEELK 344
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 773 ssrdREISSLRRQLDASHTEIAETGRVKEIaLKENRRLQDDLATMTRENqaVSSELEDAIREKEEMKTRVHNYITEVSRF 852
Cdd:PRK03918 345 ----KKLKELEKRLEELEERHELYEEAKAK-KEELERLKKRLTGLTPEK--LEKELEELEKAKEEIEEEISKITARIGEL 417
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 853 ESLIASKEKENQELlekfrmlhtqaedweikaHQAEGESSSIRLELlsVDTDRRHLRERVELLEKEIQEHMiahQAYESQ 932
Cdd:PRK03918 418 KKEIKELKKAIEEL------------------KKAKGKCPVCGREL--TEEHRKELLEEYTAELKRIEKEL---KEIEEK 474
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 933 ISSITKNMSKLEEDIKREhqdkSSVLADLTSVRELCVKLEASKDLLSRQLASKSMDYEKVLGELEDVKSEAELLKKQLSS 1012
Cdd:PRK03918 475 ERKLRKELRELEKVLKKE----SELIKLKELAEQLKELEEKLKKYNLEELEKKAEEYEKLKEKLIKLKGEIKSLKKELEK 550
|
410
....*....|....*....
gi 2024408258 1013 ERLTIQNLETLLATSRDKE 1031
Cdd:PRK03918 551 LEELKKKLAELEKKLDELE 569
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
559-938 |
2.82e-04 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 44.76 E-value: 2.82e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 559 DASLADFRRLMAEKESLREKLkiqqEAANLEKSKMQHDISVLENNIQQFEL--ERCELKSTISILKERIKSLENELKL-- 634
Cdd:COG4717 84 EEKEEEYAELQEELEELEEEL----EELEAELEELREELEKLEKLLQLLPLyqELEALEAELAELPERLEELEERLEElr 159
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 635 -KSSKLIQTSDDSSQLKAELCSLHLLN--------EQLQRTVEDLQHRFSLKKDELQSAQEEIVKLEEKIDRLNQKSTSQ 705
Cdd:COG4717 160 eLEEELEELEAELAELQEELEELLEQLslateeelQDLAEELEELQQRLAELEEELEEAQEELEELEEELEQLENELEAA 239
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 706 DEA--------VNVLRSTISVLDKEKDNLQETVDEKTEKIACLDDNLANKEKTITHLRLTLSELESSTDQLKDLLSSRDR 777
Cdd:COG4717 240 ALEerlkearlLLLIAAALLALLGLGGSLLSLILTIAGVLFLVLGLLALLFLLLAREKASLGKEAEELQALPALEELEEE 319
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 778 EISSLRRQLDASHTEIAETGRVKEIALKENRRLQDDLATMTRENQ-------------AVSSELEDAIREKEEMKTRVHN 844
Cdd:COG4717 320 ELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELEEELQleeleqeiaallaEAGVEDEEELRAALEQAEEYQE 399
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 845 YITEVSRFESLIASKEKENQELLEKFrmlhtQAEDWEIKAHQAEGESSSIRLELLSVDTDRRHLRERVELLEK--EIQEH 922
Cdd:COG4717 400 LKEELEELEEQLEELLGELEELLEAL-----DEEELEEELEELEEELEELEEELEELREELAELEAELEQLEEdgELAEL 474
|
410
....*....|....*.
gi 2024408258 923 MIAHQAYESQISSITK 938
Cdd:COG4717 475 LQELEELKAELRELAE 490
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
571-770 |
3.56e-04 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 44.62 E-value: 3.56e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 571 EKESLREKLKIQQEAANLEKSKMQHDISVLENNIQQFELERCELKSTISILKERIKSLENELKLKSSKLIQTSDDSSQLK 650
Cdd:PHA02562 189 KIDHIQQQIKTYNKNIEEQRKKNGENIARKQNKYDELVEEAKTIKAEIEELTDELLNLVMDIEDPSAALNKLNTAAAKIK 268
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 651 AELCSLHLLNEQLQ---------RTVEDLQHRFSLKKDELQSAQEEIVKLEEKIDRLNQKSTSQDEA---VNVLRSTISV 718
Cdd:PHA02562 269 SKIEQFQKVIKMYEkggvcptctQQISEGPDRITKIKDKLKELQHSLEKLDTAIDELEEIMDEFNEQskkLLELKNKIST 348
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2024408258 719 LD--------------KEKDNLQETVDEKTEKIACLDDNLANKEKTITHLRLTLSELESSTDQLKD 770
Cdd:PHA02562 349 NKqslitlvdkakkvkAAIEELQAEFVDNAEELAKLQDELDKIVKTKSELVKEKYHRGIVTDLLKD 414
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
659-888 |
4.46e-04 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 44.15 E-value: 4.46e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 659 LNEQLQRTVEDLqHRFSL----------KKDELQSAQEEIVKLEEKIDRLNQ--------KSTSQDEAVNVLRSTISVLD 720
Cdd:PRK05771 14 LKSYKDEVLEAL-HELGVvhiedlkeelSNERLRKLRSLLTKLSEALDKLRSylpklnplREEKKKVSVKSLEELIKDVE 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 721 KEKDNLQETVDEKTEKIAclddNLANKEKTITHLRLTLSELESSTDQLKDLLSSR--DREISSLRRQLDASHTEIAETGR 798
Cdd:PRK05771 93 EELEKIEKEIKELEEEIS----ELENEIKELEQEIERLEPWGNFDLDLSLLLGFKyvSVFVGTVPEDKLEELKLESDVEN 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 799 VKEIALKEN---------RRLQDDLATMTRENQAVSSELED------AIREKEEMKTRVHNYITEVSrfESLIASKEKEN 863
Cdd:PRK05771 169 VEYISTDKGyvyvvvvvlKELSDEVEEELKKLGFERLELEEegtpseLIREIKEELEEIEKERESLL--EELKELAKKYL 246
|
250 260
....*....|....*....|....*
gi 2024408258 864 QELLEKFRMLHTQAEDWEIKAHQAE 888
Cdd:PRK05771 247 EELLALYEYLEIELERAEALSKFLK 271
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
282-976 |
5.12e-04 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 44.27 E-value: 5.12e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 282 QSNKELENRIQDLLDTKKNVTSEVVHLSNKNEELCQELNEIDHLAQQLERHKeivletADKEIGEAKEIERKDSEIQDLE 361
Cdd:TIGR00606 234 ESSREIVKSYENELDPLKNRLKEIEHNLSKIMKLDNEIKALKSRKKQMEKDN------SELELKMEKVFQGTDEQLNDLY 307
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 362 E----TITRLKSELSSCRRQNERLSEELFGKADDKENLELLLNQLEQEKQRLTEKTENFEIKERELVLEIERMRLEYGia 437
Cdd:TIGR00606 308 HnhqrTVREKERELVDCQRELEKLNKERRLLNQEKTELLVEQGRLQLQADRHQEHIRARDSLIQSLATRLELDGFERG-- 385
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 438 lgdkspsrldafvktleddrDYYKRELEYLQKMIKRRpspsrrspeKSEDLRLITRERDELQSMLDRFEKHMIEIQSNVK 517
Cdd:TIGR00606 386 --------------------PFSERQIKNFHTLVIER---------QEDEAKTAAQLCADLQSKERLKQEQADEIRDEKK 436
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 518 LLTAERDRLNILYEQSQSELNRLRREAKHNLVSQSHVGEDGDASLADFRRL-MAEKESLREKLKIQQEAANLEKSKMQHD 596
Cdd:TIGR00606 437 GLGRTIELKKEILEKKQEELKFVIKELQQLEGSSDRILELDQELRKAERELsKAEKNSLTETLKKEVKSLQNEKADLDRK 516
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 597 ISVLENNIQQFELERCELKSTISILKERIKSLENELKLKSskliQTSDDSSQLKAELCSlhllNEQLQRTVEDLQHRFSL 676
Cdd:TIGR00606 517 LRKLDQEMEQLNHHTTTRTQMEMLTKDKMDKDEQIRKIKS----RHSDELTSLLGYFPN----KKQLEDWLHSKSKEINQ 588
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 677 KKDELQSAQEEIVKLEEKIDRLNQKSTSQDEAVNVLRSTI------SVLDKEKDNLQETVDEKTEKIACLDDNLANKEKT 750
Cdd:TIGR00606 589 TRDRLAKLNKELASLEQNKNHINNELESKEEQLSSYEDKLfdvcgsQDEESDLERLKEEIEKSSKQRAMLAGATAVYSQF 668
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 751 ITHLRLTLSELESSTDQLKDLLSSRDREISSLRRQLDASHTEIAETGrvKEIALKENRRlqddlATMTRENQAVSSELED 830
Cdd:TIGR00606 669 ITQLTDENQSCCPVCQRVFQTEAELQEFISDLQSKLRLAPDKLKSTE--SELKKKEKRR-----DEMLGLAPGRQSIIDL 741
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 831 AIREKEEMKTRVHNYITEVSRFESLIASKEKENQELLEKFRM-------------LHTQAEDWEIKAHQAEGESSSIRLE 897
Cdd:TIGR00606 742 KEKEIPELRNKLQKVNRDIQRLKNDIEEQETLLGTIMPEEESakvcltdvtimerFQMELKDVERKIAQQAAKLQGSDLD 821
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 898 LLSVDTDR---------RHLRERVELLEKEIQEHMIAHQAYESQISSITKNMSKLEEDIKREHQDKSSVLADLTSVRELC 968
Cdd:TIGR00606 822 RTVQQVNQekqekqhelDTVVSKIELNRKLIQDQQEQIQHLKSKTNELKSEKLQIGTNLQRRQQFEEQLVELSTEVQSLI 901
|
....*...
gi 2024408258 969 VKLEASKD 976
Cdd:TIGR00606 902 REIKDAKE 909
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
111-602 |
5.58e-04 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 43.94 E-value: 5.58e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 111 ENEAADLRFLNNQYVHKIKLLEKESKAKTEKIQQLQEK-------------NLQAVVQTPGGRKRNIPF---------RR 168
Cdd:pfam05483 253 ENKMKDLTFLLEESRDKANQLEEKTKLQDENLKELIEKkdhltkeledikmSLQRSMSTQKALEEDLQIatkticqltEE 332
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 169 QRMQIDQPVPPSAVSAYPVPQPEDPY--IADLLQVADNRIQELQSEVTQLQEKL-----EISENGKKNYSKQVELRD--- 238
Cdd:pfam05483 333 KEAQMEELNKAKAAHSFVVTEFEATTcsLEELLRTEQQRLEKNEDQLKIITMELqkkssELEEMTKFKNNKEVELEElkk 412
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 239 ------------KEIERLMLALDGGRSHEVISLESRSKSNEKLIAQLNLQVEYLQQSNKELENRIQDLLDTK-KNV--TS 303
Cdd:pfam05483 413 ilaedeklldekKQFEKIAEELKGKEQELIFLLQAREKEIHDLEIQLTAIKTSEEHYLKEVEDLKTELEKEKlKNIelTA 492
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 304 EVVHLSNKNEELCQELNEidhLAQQLERHKEIVLETADKEigeakeiERKDSEIQDLEETITRLKSELSSCRRQNERLSE 383
Cdd:pfam05483 493 HCDKLLLENKELTQEASD---MTLELKKHQEDIINCKKQE-------ERMLKQIENLEEKEMNLRDELESVREEFIQKGD 562
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 384 ELFGKADDKENLELLLNQLEQEKQRLTEKTENFEIKERELV---------LEIERMRLEYGIALGDKSPSRLDAFVKTLE 454
Cdd:pfam05483 563 EVKCKLDKSEENARSIEYEVLKKEKQMKILENKCNNLKKQIenknknieeLHQENKALKKKGSAENKQLNAYEIKVNKLE 642
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 455 DDRDYYKRELEYL----QKMIKRRPSPSRRSPEKSEDLRLITRERDELQSMLDRFEKHmiEIQSNVKLLTAERDRLNILY 530
Cdd:pfam05483 643 LELASAKQKFEEIidnyQKEIEDKKISEEKLLEEVEKAKAIADEAVKLQKEIDKRCQH--KIAEMVALMEKHKHQYDKII 720
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2024408258 531 EQSQSELNRLRREAKhnlvSQSHVGEDGDASLADFRrlmAEKESLREKLKIQQEAANLEKSKMQHDISVLEN 602
Cdd:pfam05483 721 EERDSELGLYKNKEQ----EQSSAKAALEIELSNIK---AELLSLKKQLEIEKEEKEKLKMEAKENTAILKD 785
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
851-1070 |
6.81e-04 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 43.77 E-value: 6.81e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 851 RFESLIASKEKENQELLEKFRMLHTQAEDWEIKAHQAEGESSSIRLELLSVDTDRRHLRERVELLEKEIQEHMIAHQAYE 930
Cdd:COG1196 236 ELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELE 315
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 931 SQISSITKNMSKLEEDIKREHQDKSSVLADLTSVRELCVKLEASKDLLSRQLASKSMDYEKVLGELEDVKSEAELLKKQL 1010
Cdd:COG1196 316 ERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAA 395
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2024408258 1011 SSERLTIQNLETLLAT-----SRDKEFQNHLTSHEKDSEIQLLKDKLTLAEGKLAITKILSSEIK 1070
Cdd:COG1196 396 AELAAQLEELEEAEEAllerlERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEA 460
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
554-785 |
9.32e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 43.37 E-value: 9.32e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 554 VGEDGDASLADFRRLM-AEKESLREKLKIQQ----EAANLEKSKMQHDISVLENNIQQFELERCELKstISILKERIKSL 628
Cdd:COG4913 223 TFEAADALVEHFDDLErAHEALEDAREQIELlepiRELAERYAAARERLAELEYLRAALRLWFAQRR--LELLEAELEEL 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 629 ENELKlksskliQTSDDSSQLKAELcslhllnEQLQRTVEDLQH-RFSLKKDELQSAQEEIVKLEEKIDRLNQKSTSQDE 707
Cdd:COG4913 301 RAELA-------RLEAELERLEARL-------DALREELDELEAqIRGNGGDRLEQLEREIERLERELEERERRRARLEA 366
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2024408258 708 AVNVLRSTISVLDKEKDNLQETVDEKTEKIACLDDNLANKektithlrltLSELESSTDQLKDLLSSRDREISSLRRQ 785
Cdd:COG4913 367 LLAALGLPLPASAEEFAALRAEAAALLEALEEELEALEEA----------LAEAEAALRDLRRELRELEAEIASLERR 434
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
502-1014 |
9.38e-04 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 43.51 E-value: 9.38e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 502 LDRFEKHMIEIQSNVKLLTAERDRLNILYEQSQSELNRLRR------EAKHNLVSQSHVGEDGDASLADFRRLMAEKESL 575
Cdd:PRK03918 157 LDDYENAYKNLGEVIKEIKRRIERLEKFIKRTENIEELIKEkekeleEVLREINEISSELPELREELEKLEKEVKELEEL 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 576 REKLkiqqEAANLEKSKMQHDISVLENNIQQFELERCELKSTISILKERIKSLEnELKLKSSKLIQTSDDSSQLKAELCS 655
Cdd:PRK03918 237 KEEI----EELEKELESLEGSKRKLEEKIRELEERIEELKKEIEELEEKVKELK-ELKEKAEEYIKLSEFYEEYLDELRE 311
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 656 LHLLNEQLQRTVEDLQHRF---SLKKDELQSAQEEIVKLEEKIDRLNQKSTSQDEAVNVLRS-----------TISVLDK 721
Cdd:PRK03918 312 IEKRLSRLEEEINGIEERIkelEEKEERLEELKKKLKELEKRLEELEERHELYEEAKAKKEElerlkkrltglTPEKLEK 391
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 722 EKDNLQETVDEKTEKIACLDDNLANKEKTITHLRLTLSELESStdqlkdllssrDREISSLRRQLDASHTEiaetgRVKE 801
Cdd:PRK03918 392 ELEELEKAKEEIEEEISKITARIGELKKEIKELKKAIEELKKA-----------KGKCPVCGRELTEEHRK-----ELLE 455
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 802 IALKENRRLQDDLAtmtrenqavssELEDAIREKEEMKTRVHNYITEVSRF-------ESLIASKEKENQELLEKFRMLH 874
Cdd:PRK03918 456 EYTAELKRIEKELK-----------EIEEKERKLRKELRELEKVLKKESELiklkelaEQLKELEEKLKKYNLEELEKKA 524
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 875 TQAEDWEIKAHQAEGESSSIRLELlsvdtdrrhlrERVELLEKEIQEHMIAHQAYESQISSITKNMSK--------LEED 946
Cdd:PRK03918 525 EEYEKLKEKLIKLKGEIKSLKKEL-----------EKLEELKKKLAELEKKLDELEEELAELLKELEElgfesveeLEER 593
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2024408258 947 IKREHQDKSSVLADLTSVRELCVKLEASKDLlSRQLASKSMDYEKVLGELEDVKSEAELLKKQLSSER 1014
Cdd:PRK03918 594 LKELEPFYNEYLELKDAEKELEREEKELKKL-EEELDKAFEELAETEKRLEELRKELEELEKKYSEEE 660
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
555-802 |
1.14e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 42.98 E-value: 1.14e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 555 GEDGDASLADFRRLMAEKESLREKLKIQQEAANLEKSKMQhDISVLENNIQQFELERCELKStisiLKERIKSLENELKl 634
Cdd:COG4913 605 GFDNRAKLAALEAELAELEEELAEAEERLEALEAELDALQ-ERREALQRLAEYSWDEIDVAS----AEREIAELEAELE- 678
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 635 kssKLIQTSDDSSQLKAELCSLHLLNEQLQRTVEDLQHRFSLKKDELQSAQEEIVKLEEKIDRLNQKST----------- 703
Cdd:COG4913 679 ---RLDASSDDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARlelralleerf 755
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 704 -------SQDEAVNVLRSTISVLDKEKDNLQETVDEKTEK--------IACLDDNLANKEKTITHL-RLTLSELESSTDQ 767
Cdd:COG4913 756 aaalgdaVERELRENLEERIDALRARLNRAEEELERAMRAfnrewpaeTADLDADLESLPEYLALLdRLEEDGLPEYEER 835
|
250 260 270
....*....|....*....|....*....|....*.
gi 2024408258 768 LKDLLSSR-DREISSLRRQLDASHTEIAEtgRVKEI 802
Cdd:COG4913 836 FKELLNENsIEFVADLLSKLRRAIREIKE--RIDPL 869
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
489-702 |
1.46e-03 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 42.70 E-value: 1.46e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 489 RLITRERDELQSMLDRFEKHMIEIQSNVklltaerdrlnilyEQSQSELNRLRReaKHNLVSQSHVGEDGDASLADFRRL 568
Cdd:COG3206 164 QNLELRREEARKALEFLEEQLPELRKEL--------------EEAEAALEEFRQ--KNGLVDLSEEAKLLLQQLSELESQ 227
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 569 MAEKESLREKLKIQQEAANLEKSKMQHDISVLENNiqqfelercelkSTISILKERIKSLENELKLKSSKLIQTSDDSSQ 648
Cdd:COG3206 228 LAEARAELAEAEARLAALRAQLGSGPDALPELLQS------------PVIQQLRAQLAELEAELAELSARYTPNHPDVIA 295
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 2024408258 649 LKAELCSL-HLLNEQLQRTVEDLQHRFSLKKDELQSAQEEIVKLEEKIDRLNQKS 702
Cdd:COG3206 296 LRAQIAALrAQLQQEAQRILASLEAELEALQAREASLQAQLAQLEARLAELPELE 350
|
|
| COG2433 |
COG2433 |
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only]; |
571-698 |
1.60e-03 |
|
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 42.54 E-value: 1.60e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 571 EKESLREKLKIQQEAANLEKSKMQHDISVLENNIQQFELERCELKSTISILKERIKSLENELKLKSSKLIQTSDDSSQLK 650
Cdd:COG2433 389 ELPEEEPEAEREKEHEERELTEEEEEIRRLEEQVERLEAEVEELEAELEEKDERIERLERELSEARSEERREIRKDREIS 468
|
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 2024408258 651 AelcslhllneqLQRTVEDLQHrfslkkdELQSAQEEIVKLEEKIDRL 698
Cdd:COG2433 469 R-----------LDREIERLER-------ELEEERERIEELKRKLERL 498
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
265-471 |
1.72e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 42.59 E-value: 1.72e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 265 SNEKLIAQLNLQVEYLQQSNKELENRIQDLldtkknvtsevvhlsnknEELCQELNEIDHLAQQLERHKEIVLETADKEi 344
Cdd:COG4913 607 DNRAKLAALEAELAELEEELAEAEERLEAL------------------EAELDALQERREALQRLAEYSWDEIDVASAE- 667
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 345 geaKEIERKDSEIQDLEET---ITRLKSELSSCRRQNERLSEELFGKADDKENLELLLNQLEQEKQRLTEKTENFEIKER 421
Cdd:COG4913 668 ---REIAELEAELERLDASsddLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLAR 744
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 2024408258 422 -ELVLEIERMRLEygiALGDKSPSRLdafVKTLEDDRDYYKRELEYLQKMI 471
Cdd:COG4913 745 lELRALLEERFAA---ALGDAVEREL---RENLEERIDALRARLNRAEEEL 789
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
493-709 |
2.05e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 41.67 E-value: 2.05e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 493 RERDELQSMLDRFEKHMIEIQSNVKLLTAERDRLNILYEQSQSELNRLRREAKhnlvsqshvgedgdASLADFRRLMAEK 572
Cdd:COG4942 27 AELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELA--------------ALEAELAELEKEI 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 573 ESLREKLKIQQEA-----ANLEKSKMQHDISVLENN------------IQQFELERCELKSTISILKERIKSLENELKLK 635
Cdd:COG4942 93 AELRAELEAQKEElaellRALYRLGRQPPLALLLSPedfldavrrlqyLKYLAPARREQAEELRADLAELAALRAELEAE 172
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2024408258 636 SSKLIQTSDDSSQLKAELCSLHllnEQLQRTVEDLQHRFSLKKDELQSAQEEIVKLEEKIDRLNQKSTSQDEAV 709
Cdd:COG4942 173 RAELEALLAELEEERAALEALK---AERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERT 243
|
|
| PLN02939 |
PLN02939 |
transferase, transferring glycosyl groups |
486-732 |
2.14e-03 |
|
transferase, transferring glycosyl groups
Pssm-ID: 215507 [Multi-domain] Cd Length: 977 Bit Score: 42.20 E-value: 2.14e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 486 EDLRLITRERDELQSMLDRFEKHMIEIQSNVKLLTAERDRLNILYEQsqseLNRLRREAKHNLVSQSHVgedgdasladF 565
Cdd:PLN02939 156 EDLEKILTEKEALQGKINILEMRLSETDARIKLAAQEKIHVEILEEQ----LEKLRNELLIRGATEGLC----------V 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 566 RRLMAEKESLREKLKIQQEAANLEKSKMQHdISVLENNIQQFELERCELKSTISILKER-IKSLENELKLKSSKL----- 639
Cdd:PLN02939 222 HSLSKELDVLKEENMLLKDDIQFLKAELIE-VAETEERVFKLEKERSLLDASLRELESKfIVAQEDVSKLSPLQYdcwwe 300
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 640 ----IQTSDDSSQLKAELCSLHL-LNEQLQRTVEDLQ--------HRFSLKKDELQsaQEEIVKLEEKIDRLNQKSTSQ- 705
Cdd:PLN02939 301 kvenLQDLLDRATNQVEKAALVLdQNQDLRDKVDKLEaslkeanvSKFSSYKVELL--QQKLKLLEERLQASDHEIHSYi 378
|
250 260 270
....*....|....*....|....*....|..
gi 2024408258 706 ---DEAVNVLRSTISVLDKE--KDNLQETVDE 732
Cdd:PLN02939 379 qlyQESIKEFQDTLSKLKEEskKRSLEHPADD 410
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
745-1063 |
2.92e-03 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 41.97 E-value: 2.92e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 745 ANKEKTITHLRLTLSELesstDQLKDLLSSRDREISSLRRQldashTEIAEtgrvKEIALKENRRlQDDLATMTRENQAV 824
Cdd:TIGR02168 172 ERRKETERKLERTRENL----DRLEDILNELERQLKSLERQ-----AEKAE----RYKELKAELR-ELELALLVLRLEEL 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 825 SSELEDAIREKEEMKTRVHNYITEVSRFESLIASKEKENQELLEKFrmlhtqaedweikaHQAEGESSSIRLELLSVDTD 904
Cdd:TIGR02168 238 REELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEI--------------EELQKELYALANEISRLEQQ 303
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 905 RRHLRERVELLEKEIQEhmiahqaYESQissITKNMSKLEEDIKREHQdKSSVLADLTSVRELCVKLEASKDLLSRQLAS 984
Cdd:TIGR02168 304 KQILRERLANLERQLEE-------LEAQ---LEELESKLDELAEELAE-LEEKLEELKEELESLEAELEELEAELEELES 372
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 985 KSMDYEKvlgELEDVKSEAELLKKQLSSERLTIQNLETL---LATSRDKEFQNHLTSHEKDSEIQLLKDKLTLAEGKLAI 1061
Cdd:TIGR02168 373 RLEELEE---QLETLRSKVAQLELQIASLNNEIERLEARlerLEDRRERLQQEIEELLKKLEEAELKELQAELEELEEEL 449
|
..
gi 2024408258 1062 TK 1063
Cdd:TIGR02168 450 EE 451
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
604-777 |
3.42e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 40.29 E-value: 3.42e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 604 IQQFELERCELKSTISILKERIKSLENELKLKSSKLIQTSDDSSQLKAELCSLHLLNEQLQRTVEDLQHRFSLKKD--EL 681
Cdd:COG1579 12 LQELDSELDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQLGNVRNnkEY 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 682 QSAQEEIVKLEEKIDRLNQKSTSQDEAVNVLRSTISVLDKEKDNLQETVDEKTEKiacLDDNLANKEKTITHLRLTLSEL 761
Cdd:COG1579 92 EALQKEIESLKRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAE---LDEELAELEAELEELEAEREEL 168
|
170
....*....|....*.
gi 2024408258 762 ESSTDqlKDLLSSRDR 777
Cdd:COG1579 169 AAKIP--PELLALYER 182
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
337-945 |
3.62e-03 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 41.59 E-value: 3.62e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 337 LETADKEIGEA-KEIERKDSEIQDLEETITRLKSELSSCRRQNERLSEELFGKADDKENLELLLNQLEQEKQRLTEKTEN 415
Cdd:PRK03918 160 YENAYKNLGEViKEIKRRIERLEKFIKRTENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKELEELKEE 239
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 416 FEIKERELVLEIERMRleygialgdkspsRLDAFVKTLEDDRDYYKRELEYLQKMIKRRPSPSrrspEKSEDLRLITRER 495
Cdd:PRK03918 240 IEELEKELESLEGSKR-------------KLEEKIRELEERIEELKKEIEELEEKVKELKELK----EKAEEYIKLSEFY 302
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 496 DELQSMLDRFEKHMIEIQSNVKLLTAERDRLnilyEQSQSELNRLRREAKHNLVSQSHVGEDGDAsLADFRRLMAEKESL 575
Cdd:PRK03918 303 EEYLDELREIEKRLSRLEEEINGIEERIKEL----EEKEERLEELKKKLKELEKRLEELEERHEL-YEEAKAKKEELERL 377
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 576 REKLKiqqeaaNLEKSKMQHDISVLENNIQQFELERCELKSTISILKERIKSLENEL-KLKSSKLiqtsddssqlKAELC 654
Cdd:PRK03918 378 KKRLT------GLTPEKLEKELEELEKAKEEIEEEISKITARIGELKKEIKELKKAIeELKKAKG----------KCPVC 441
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 655 SLHLLNEQLQRTVEDLQHRFSLKKDELQSAQEEIVKLEEKIDRLnQKSTSQDEAVNVLRSTISVLDKEKDNLQETVDEKT 734
Cdd:PRK03918 442 GRELTEEHRKELLEEYTAELKRIEKELKEIEEKERKLRKELREL-EKVLKKESELIKLKELAEQLKELEEKLKKYNLEEL 520
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 735 EKIACLDDNLanKEKTIThLRLTLSELESSTDQLKDLLSSR---DREISSLRRQLDASHTEIAETGRVKEIALKENRRLQ 811
Cdd:PRK03918 521 EKKAEEYEKL--KEKLIK-LKGEIKSLKKELEKLEELKKKLaelEKKLDELEEELAELLKELEELGFESVEELEERLKEL 597
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 812 DDLATMTRENQAVSSELEDAIREKEEMKTRVHNYITEVSRFESLIASKEKENQELLEKFRmlhtqaedwEIKAHQAEGES 891
Cdd:PRK03918 598 EPFYNEYLELKDAEKELEREEKELKKLEEELDKAFEELAETEKRLEELRKELEELEKKYS---------EEEYEELREEY 668
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|....*..
gi 2024408258 892 SSIRLELLSVDTDRRHLRERVELLEK---EIQEHMIAHQAYESQISSITKNMSKLEE 945
Cdd:PRK03918 669 LELSRELAGLRAELEELEKRREEIKKtleKLKEELEEREKAKKELEKLEKALERVEE 725
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
679-950 |
3.71e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 41.44 E-value: 3.71e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 679 DELQSAQEEIVKLEEKIDRLnqkstsqdeavnvlrstiSVLDKEKDNLQETVDEKTEKIACLDD-NLANKEKTITHLRLT 757
Cdd:COG4913 235 DDLERAHEALEDAREQIELL------------------EPIRELAERYAAARERLAELEYLRAAlRLWFAQRRLELLEAE 296
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 758 LSELESSTDQLKDLLSSRDREISSLRRQLDASHTEIAETGRVKEIALKEnrrlqddlatmtrenqavssELEDAIREKEE 837
Cdd:COG4913 297 LEELRAELARLEAELERLEARLDALREELDELEAQIRGNGGDRLEQLER--------------------EIERLERELEE 356
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 838 MKTRVHNYITEVSRFESLIASKEKENQELLEKFRMLHTQAEDWEIKAHQAEGESssirlellsvDTDRRHLRERVELLEK 917
Cdd:COG4913 357 RERRRARLEALLAALGLPLPASAEEFAALRAEAAALLEALEEELEALEEALAEA----------EAALRDLRRELRELEA 426
|
250 260 270
....*....|....*....|....*....|...
gi 2024408258 918 EIqehmiahQAYESQISSITKNMSKLEEDIKRE 950
Cdd:COG4913 427 EI-------ASLERRKSNIPARLLALRDALAEA 452
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
692-837 |
3.74e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 41.44 E-value: 3.74e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 692 EEKIDRLNQKSTSQDEAVNVLRSTISVLDKEKDNLQEtvdektekIACLDDNLANKEKTITHLRLTLSELESSTDQLKDL 771
Cdd:COG4913 609 RAKLAALEAELAELEEELAEAEERLEALEAELDALQE--------RREALQRLAEYSWDEIDVASAEREIAELEAELERL 680
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2024408258 772 LSSRDrEISSLRRQLDASHTEIAETGRVKEIALKENRRLQDDLATMTRENQAVSSELEDAIREKEE 837
Cdd:COG4913 681 DASSD-DLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARL 745
|
|
| PLN02939 |
PLN02939 |
transferase, transferring glycosyl groups |
561-827 |
3.84e-03 |
|
transferase, transferring glycosyl groups
Pssm-ID: 215507 [Multi-domain] Cd Length: 977 Bit Score: 41.43 E-value: 3.84e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 561 SLADFRRLMAEKESLREKLKIQQ----EAANLEKSKMQHDISVlENNIQQFELERCELKSTISILKERIKSLENELKLKS 636
Cdd:PLN02939 154 ALEDLEKILTEKEALQGKINILEmrlsETDARIKLAAQEKIHV-EILEEQLEKLRNELLIRGATEGLCVHSLSKELDVLK 232
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 637 SKLIQTSDDSSQLKAELCSLHLLNEQ----------LQRTVEDLQHRFSlkkdelqSAQEEIVKLEE-KIDRLNQKSTS- 704
Cdd:PLN02939 233 EENMLLKDDIQFLKAELIEVAETEERvfklekerslLDASLRELESKFI-------VAQEDVSKLSPlQYDCWWEKVENl 305
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 705 ---QDEAVNVLRSTISVLDKEKDnLQETVDEKTEKIaclddnlanKEKTITHLRLTLSELesstdqlkdllssRDREISS 781
Cdd:PLN02939 306 qdlLDRATNQVEKAALVLDQNQD-LRDKVDKLEASL---------KEANVSKFSSYKVEL-------------LQQKLKL 362
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 2024408258 782 LRRQLDASHTEIAETGRVKEIALKEnrrLQDDLATMTRENQAVSSE 827
Cdd:PLN02939 363 LEERLQASDHEIHSYIQLYQESIKE---FQDTLSKLKEESKKRSLE 405
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
313-834 |
4.00e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 41.44 E-value: 4.00e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 313 EELCQELNEIDHLAQQLERHkEIVLETADKEIGEaKEIERKDSEIQDLEETITRLKSELSSCRRQNERLSEELfgkaddK 392
Cdd:COG4913 255 EPIRELAERYAAARERLAEL-EYLRAALRLWFAQ-RRLELLEAELEELRAELARLEAELERLEARLDALREEL------D 326
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 393 ENLELLLNQLEQEKQRLTEktenfEIKERELVL-EIERMRLEYG---IALGDKSPSRLDAFVKTLEDDRDYYKRELEYLQ 468
Cdd:COG4913 327 ELEAQIRGNGGDRLEQLER-----EIERLERELeERERRRARLEallAALGLPLPASAEEFAALRAEAAALLEALEEELE 401
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 469 KMIKRRPSPSRRSPEKSEDLRLITRERDELQSMLDRFEKHMIEIQSN------------------VKLLTAERD------ 524
Cdd:COG4913 402 ALEEALAEAEAALRDLRRELRELEAEIASLERRKSNIPARLLALRDAlaealgldeaelpfvgelIEVRPEEERwrgaie 481
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 525 ------RLNILYEQSQseLNRLRREAKHNLVSQSHVGEDGDASLADFRRLMAEKESLREKLKIQQ-EAANLEKSKMQHDI 597
Cdd:COG4913 482 rvlggfALTLLVPPEH--YAAALRWVNRLHLRGRLVYERVRTGLPDPERPRLDPDSLAGKLDFKPhPFRAWLEAELGRRF 559
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 598 SVLE-NNIQQFELER------CELKS--------------TISIL----KERIKSLENELKLKSSKLIQTSDDSSQLKAE 652
Cdd:COG4913 560 DYVCvDSPEELRRHPraitraGQVKGngtrhekddrrrirSRYVLgfdnRAKLAALEAELAELEEELAEAEERLEALEAE 639
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 653 lcsLHLLNEQLQRTVEDLQHRFSLkkDELQSAQEEIVKLEEKIDRLNQkstSQDEaVNVLRSTISVLDKEKDNLQETVDE 732
Cdd:COG4913 640 ---LDALQERREALQRLAEYSWDE--IDVASAEREIAELEAELERLDA---SSDD-LAALEEQLEELEAELEELEEELDE 710
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 733 KTEKIACLDDNLANKEKTITHLRLTLSELEsstdqlkdllssrDREISSLRRQLDASHTEIAETGRVKEIAlkenRRLQD 812
Cdd:COG4913 711 LKGEIGRLEKELEQAEEELDELQDRLEAAE-------------DLARLELRALLEERFAAALGDAVERELR----ENLEE 773
|
570 580
....*....|....*....|..
gi 2024408258 813 DLATMTRENQAVSSELEDAIRE 834
Cdd:COG4913 774 RIDALRARLNRAEEELERAMRA 795
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
204-698 |
5.08e-03 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 40.82 E-value: 5.08e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 204 NRIQELQSEVTQLQEKLEISENGKKNYSKQVELRDKEIERLMlaldgGRSHEVISLESRSKSNEKLIAQLNLQVEYLQQS 283
Cdd:PRK03918 238 EEIEELEKELESLEGSKRKLEEKIRELEERIEELKKEIEELE-----EKVKELKELKEKAEEYIKLSEFYEEYLDELREI 312
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 284 NKELE------NRIQDLLDTKKNVTSEVVHLSNKNEELCQELNEIDHLAQQLERHKEIVLE-----------TADKEIGE 346
Cdd:PRK03918 313 EKRLSrleeeiNGIEERIKELEEKEERLEELKKKLKELEKRLEELEERHELYEEAKAKKEElerlkkrltglTPEKLEKE 392
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 347 AKEIERKDSEIQDLEETITRLKSELSSCRRQNERLSEEL---------FGKADDKENLELLLNQLEQEKQRLTEKTENFE 417
Cdd:PRK03918 393 LEELEKAKEEIEEEISKITARIGELKKEIKELKKAIEELkkakgkcpvCGRELTEEHRKELLEEYTAELKRIEKELKEIE 472
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 418 IKERELVLEIERMRLEYgialgdKSPSRLDAFVKTLEddrdyykrELEYLQKmiKRRPSPSRRSPEKSEDLRLITRERDE 497
Cdd:PRK03918 473 EKERKLRKELRELEKVL------KKESELIKLKELAE--------QLKELEE--KLKKYNLEELEKKAEEYEKLKEKLIK 536
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 498 LQSMLDRFEKHMIEIqsnvKLLTAERDRLNILYEQSQSELNRLRREakhnlvsqshVGEDGDASLADFRRLMAEKESLRE 577
Cdd:PRK03918 537 LKGEIKSLKKELEKL----EELKKKLAELEKKLDELEEELAELLKE----------LEELGFESVEELEERLKELEPFYN 602
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 578 KLkIQQEAANLEKSKMQHDISVLENNIQQFELERCELKSTISILKERIKSL-----ENELKLKSSKLIQTSDDSSQLKAE 652
Cdd:PRK03918 603 EY-LELKDAEKELEREEKELKKLEEELDKAFEELAETEKRLEELRKELEELekkysEEEYEELREEYLELSRELAGLRAE 681
|
490 500 510 520
....*....|....*....|....*....|....*....|....*.
gi 2024408258 653 LCSLHLLNEQLQRTVEDLQHRfslkKDELQSAQEEIVKLEEKIDRL 698
Cdd:PRK03918 682 LEELEKRREEIKKTLEKLKEE----LEEREKAKKELEKLEKALERV 723
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
204-633 |
6.89e-03 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 40.39 E-value: 6.89e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 204 NRIQELQSEVTQLQEK-LEISENGKKNysKQVELRDKEIERLMLALDGGRSHEVIS-LESRSKSNEKLIAQLNLQVEYLQ 281
Cdd:TIGR04523 257 QLKDEQNKIKKQLSEKqKELEQNNKKI--KELEKQLNQLKSEISDLNNQKEQDWNKeLKSELKNQEKKLEEIQNQISQNN 334
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 282 QSNKELENRIQDLLDTKKNVTSEvvhlsnkNEELCQELNEIDHLAQQLErhkeivletadkeigeaKEIERKDSEIQDLE 361
Cdd:TIGR04523 335 KIISQLNEQISQLKKELTNSESE-------NSEKQRELEEKQNEIEKLK-----------------KENQSYKQEIKNLE 390
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 362 ETITRLKSELSSCRRQNERLSEELFGKADDKenLELLLNQLEQEKQRLTEKTENFEIKERELVLEIERMRLEYGIALGDK 441
Cdd:TIGR04523 391 SQINDLESKIQNQEKLNQQKDEQIKKLQQEK--ELLEKEIERLKETIIKNNSEIKDLTNQDSVKELIIKNLDNTRESLET 468
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 442 SPSRLDAFVKTLEDDRDYYKRELEYLQKMIKRRPSPSRRSPEKSEDLrliTRERDELQSMLDRFEKHMIEIQSnvKLLTA 521
Cdd:TIGR04523 469 QLKVLSRSINKIKQNLEQKQKELKSKEKELKKLNEEKKELEEKVKDL---TKKISSLKEKIEKLESEKKEKES--KISDL 543
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 522 ERDRLNILYEQSQSELNRLRREAKHNLVSQSHVGEDGDASLADFRRLMAEKESLREKLKIQQEAANLEKSKMQHDISVLE 601
Cdd:TIGR04523 544 EDELNKDDFELKKENLEKEIDEKNKEIEELKQTQKSLKKKQEEKQELIDQKEKEKKDLIKEIEEKEKKISSLEKELEKAK 623
|
410 420 430
....*....|....*....|....*....|..
gi 2024408258 602 NNIQQFELERCELKSTISILKERIKSLENELK 633
Cdd:TIGR04523 624 KENEKLSSIIKNIKSKKNKLKQEVKQIKETIK 655
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
408-1014 |
7.71e-03 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 40.48 E-value: 7.71e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 408 RLTEKTENFEIKERE-------LVLEIERMRLEYGIALGDKSPSRLDAFVKTLEDDR------DYYKRELEYLQKMIKRR 474
Cdd:pfam05483 166 RSAEKTKKYEYEREEtrqvymdLNNNIEKMILAFEELRVQAENARLEMHFKLKEDHEkiqhleEEYKKEINDKEKQVSLL 245
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 475 PSPSRRSPEKSEDLRLITRERDELQSMLDRFEKHMIEiqsNVKLLTAERDRLNilyeqsqSELNRLRREAKHNLVSQSHV 554
Cdd:pfam05483 246 LIQITEKENKMKDLTFLLEESRDKANQLEEKTKLQDE---NLKELIEKKDHLT-------KELEDIKMSLQRSMSTQKAL 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 555 GEDGDASLADFRRLMAEKESLREKLKIQQEAANLEKSKMQHDISVLENNI----QQFELERCELKSTISILKERIKSLEN 630
Cdd:pfam05483 316 EEDLQIATKTICQLTEEKEAQMEELNKAKAAHSFVVTEFEATTCSLEELLrteqQRLEKNEDQLKIITMELQKKSSELEE 395
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 631 ELKLKSSKLIQTSDDSSQLkAELCSLHLLNEQLQRTVEDLQHRFSLKKDELQSAQEEIVKLEEKidrLNQKSTSQDEAVN 710
Cdd:pfam05483 396 MTKFKNNKEVELEELKKIL-AEDEKLLDEKKQFEKIAEELKGKEQELIFLLQAREKEIHDLEIQ---LTAIKTSEEHYLK 471
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 711 VLRSTISVLDKEKDNLQETVDEktekiaCLDDNLANKEKTITHLRLTLsELESSTDQLKDLLSSRDREISSLRRQLDASH 790
Cdd:pfam05483 472 EVEDLKTELEKEKLKNIELTAH------CDKLLLENKELTQEASDMTL-ELKKHQEDIINCKKQEERMLKQIENLEEKEM 544
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 791 TEIAETGRVKEIALKENRRLQDDLATMTRENQAVSSELEDAIREKEEMKTRVHNYITEVSRFESLIASKEKENQELLEKF 870
Cdd:pfam05483 545 NLRDELESVREEFIQKGDEVKCKLDKSEENARSIEYEVLKKEKQMKILENKCNNLKKQIENKNKNIEELHQENKALKKKG 624
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024408258 871 RMLHTQAEDWEIKAHQAEgesssirlelLSVDTDRRHLRERVELLEKEIQEHMIAHQAYESQIS---SITKNMSKLEEDI 947
Cdd:pfam05483 625 SAENKQLNAYEIKVNKLE----------LELASAKQKFEEIIDNYQKEIEDKKISEEKLLEEVEkakAIADEAVKLQKEI 694
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2024408258 948 KREHQDKSSVLADLTSVR-----ELCVKLEASKDLLSRQLASKSMDYEKVLGELEDVKSEAELLKKQLSSER 1014
Cdd:pfam05483 695 DKRCQHKIAEMVALMEKHkhqydKIIEERDSELGLYKNKEQEQSSAKAALEIELSNIKAELLSLKKQLEIEK 766
|
|
| |
