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Conserved domains on  [gi|2024420674|ref|XP_040559707|]
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leucine-rich repeat flightless-interacting protein 1 isoform X21 [Gallus gallus]

Protein Classification

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
LRRFIP super family cl26610
LRRFIP family; LRRFIP1 is a transcriptional repressor which preferentially binds to the ...
13-219 3.49e-58

LRRFIP family; LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin.


The actual alignment was detected with superfamily member pfam09738:

Pssm-ID: 462869 [Multi-domain]  Cd Length: 303  Bit Score: 201.46  E-value: 3.49e-58
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024420674  13 QIEERPEKDF----------EKGARTVSSLSAATLASLGGTSSRRGSGDTSISADTEASIREIKDSLAEVEEKYKKAMVS 82
Cdd:pfam09738  29 EVEENADRVFdmssssgadtASGSPTASTTSAGTLNSLGGTSSRRSSEDSSISLEDEGSLRDIKHELKEVEEKYRKAMIS 108
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024420674  83 NAQLDNEKTNFMYQVDTLKDALLELEEQLAESRRQYEEKSKEFEREKHAHSILQFQFKEIKEALKQREEMLAKHGIIPDS 162
Cdd:pfam09738 109 NAQLDNEKSNLMYQVDLLKDKLEEMEESLAELQRELREKNKELERLKRNLRRLQFQLAELKEQLKQRDELIEKHGLVIVP 188
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2024420674 163 DIATNGEasdvlDNEGHLDSSKTV--QGTTQALKTAGDGMLG--KANEVDMKNEILEDVGK 219
Cdd:pfam09738 189 DENTNGE-----EENSPADAKRALvsVEAAEVLESAGEGSLDvrLKKLADEKEELLDEVRK 244
2A1904 super family cl36772
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ...
589-840 2.24e-07

K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]


The actual alignment was detected with superfamily member TIGR00927:

Pssm-ID: 273344 [Multi-domain]  Cd Length: 1096  Bit Score: 55.00  E-value: 2.24e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024420674  589 ETSLDPDFSDDEIEETEMQT-GDVSGKGEGNRIEDLEHNTTEDLKPKAELQTVqcSEETTGDTE-DEKNTSLESEAQNAD 666
Cdd:TIGR00927  650 ERPTEAEGENGEESGGEAEQeGETETKGENESEGEIPAERKGEQEGEGEIEAK--EADHKGETEaEEVEHEGETEAEGTE 727
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024420674  667 KQEEGESKEESIVCHSvTSESQVDKEALKENKKESEPADHQGDGFTSVEDADSSLALKAELDENASEQLKLEGQAEEEQE 746
Cdd:TIGR00927  728 DEGEIETGEEGEEVED-EGEGEAEGKHEVETEGDRKETEHEGETEAEGKEDEDEGEIQAGEDGEMKGDEGAEGKVEHEGE 806
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024420674  747 DDGDAFDFDEDSEQTVETDEKCDGEEVDAQSEEDDRTNSVIRKTAQTGEAGEGSGKIETSDTLTEDDSLQHKEGNESEET 826
Cdd:TIGR00927  807 TEAGEKDEHEGQSETQADDTEVKDETGEQELNAENQGEAKQDEKGVDGGGGSDGGDSEEEEEEEEEEEEEEEEEEEEEEE 886
                          250
                   ....*....|....
gi 2024420674  827 ELSQEEASALETDE 840
Cdd:TIGR00927  887 EEENEEPLSLEWPE 900
2A1904 super family cl36772
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ...
455-703 1.73e-06

K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]


The actual alignment was detected with superfamily member TIGR00927:

Pssm-ID: 273344 [Multi-domain]  Cd Length: 1096  Bit Score: 51.92  E-value: 1.73e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024420674  455 GDRAGEQNEVWSAVQGQKMERDSTGLE--------GEESCESGAPSDPNEEGGDQAHIQPVSSEVGELALLEEQNTQEQT 526
Cdd:TIGR00927  642 GERTGEEGERPTEAEGENGEESGGEAEqegetetkGENESEGEIPAERKGEQEGEGEIEAKEADHKGETEAEEVEHEGET 721
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024420674  527 ELKPAEKDGQEEVLIGNlEACSDPAEKQEKASESVGS-ANEVEGNVLHQTEPDMDSVKEMAAQETSLDPDFSDDEIEETE 605
Cdd:TIGR00927  722 EAEGTEDEGEIETGEEG-EEVEDEGEGEAEGKHEVETeGDRKETEHEGETEAEGKEDEDEGEIQAGEDGEMKGDEGAEGK 800
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024420674  606 MQTGDVSGKGEGNRIEDLEHNTTEDLKPKAELQTVQCSEETTGDT-EDEKNTSLESEAQNADKQEEgESKEEsivchSVT 684
Cdd:TIGR00927  801 VEHEGETEAGEKDEHEGQSETQADDTEVKDETGEQELNAENQGEAkQDEKGVDGGGGSDGGDSEEE-EEEEE-----EEE 874
                          250
                   ....*....|....*....
gi 2024420674  685 SESQVDKEALKENKKESEP 703
Cdd:TIGR00927  875 EEEEEEEEEEEEEEENEEP 893
 
Name Accession Description Interval E-value
LRRFIP pfam09738
LRRFIP family; LRRFIP1 is a transcriptional repressor which preferentially binds to the ...
13-219 3.49e-58

LRRFIP family; LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin.


Pssm-ID: 462869 [Multi-domain]  Cd Length: 303  Bit Score: 201.46  E-value: 3.49e-58
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024420674  13 QIEERPEKDF----------EKGARTVSSLSAATLASLGGTSSRRGSGDTSISADTEASIREIKDSLAEVEEKYKKAMVS 82
Cdd:pfam09738  29 EVEENADRVFdmssssgadtASGSPTASTTSAGTLNSLGGTSSRRSSEDSSISLEDEGSLRDIKHELKEVEEKYRKAMIS 108
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024420674  83 NAQLDNEKTNFMYQVDTLKDALLELEEQLAESRRQYEEKSKEFEREKHAHSILQFQFKEIKEALKQREEMLAKHGIIPDS 162
Cdd:pfam09738 109 NAQLDNEKSNLMYQVDLLKDKLEEMEESLAELQRELREKNKELERLKRNLRRLQFQLAELKEQLKQRDELIEKHGLVIVP 188
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2024420674 163 DIATNGEasdvlDNEGHLDSSKTV--QGTTQALKTAGDGMLG--KANEVDMKNEILEDVGK 219
Cdd:pfam09738 189 DENTNGE-----EENSPADAKRALvsVEAAEVLESAGEGSLDvrLKKLADEKEELLDEVRK 244
2A1904 TIGR00927
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ...
589-840 2.24e-07

K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273344 [Multi-domain]  Cd Length: 1096  Bit Score: 55.00  E-value: 2.24e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024420674  589 ETSLDPDFSDDEIEETEMQT-GDVSGKGEGNRIEDLEHNTTEDLKPKAELQTVqcSEETTGDTE-DEKNTSLESEAQNAD 666
Cdd:TIGR00927  650 ERPTEAEGENGEESGGEAEQeGETETKGENESEGEIPAERKGEQEGEGEIEAK--EADHKGETEaEEVEHEGETEAEGTE 727
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024420674  667 KQEEGESKEESIVCHSvTSESQVDKEALKENKKESEPADHQGDGFTSVEDADSSLALKAELDENASEQLKLEGQAEEEQE 746
Cdd:TIGR00927  728 DEGEIETGEEGEEVED-EGEGEAEGKHEVETEGDRKETEHEGETEAEGKEDEDEGEIQAGEDGEMKGDEGAEGKVEHEGE 806
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024420674  747 DDGDAFDFDEDSEQTVETDEKCDGEEVDAQSEEDDRTNSVIRKTAQTGEAGEGSGKIETSDTLTEDDSLQHKEGNESEET 826
Cdd:TIGR00927  807 TEAGEKDEHEGQSETQADDTEVKDETGEQELNAENQGEAKQDEKGVDGGGGSDGGDSEEEEEEEEEEEEEEEEEEEEEEE 886
                          250
                   ....*....|....
gi 2024420674  827 ELSQEEASALETDE 840
Cdd:TIGR00927  887 EEENEEPLSLEWPE 900
2A1904 TIGR00927
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ...
455-703 1.73e-06

K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273344 [Multi-domain]  Cd Length: 1096  Bit Score: 51.92  E-value: 1.73e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024420674  455 GDRAGEQNEVWSAVQGQKMERDSTGLE--------GEESCESGAPSDPNEEGGDQAHIQPVSSEVGELALLEEQNTQEQT 526
Cdd:TIGR00927  642 GERTGEEGERPTEAEGENGEESGGEAEqegetetkGENESEGEIPAERKGEQEGEGEIEAKEADHKGETEAEEVEHEGET 721
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024420674  527 ELKPAEKDGQEEVLIGNlEACSDPAEKQEKASESVGS-ANEVEGNVLHQTEPDMDSVKEMAAQETSLDPDFSDDEIEETE 605
Cdd:TIGR00927  722 EAEGTEDEGEIETGEEG-EEVEDEGEGEAEGKHEVETeGDRKETEHEGETEAEGKEDEDEGEIQAGEDGEMKGDEGAEGK 800
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024420674  606 MQTGDVSGKGEGNRIEDLEHNTTEDLKPKAELQTVQCSEETTGDT-EDEKNTSLESEAQNADKQEEgESKEEsivchSVT 684
Cdd:TIGR00927  801 VEHEGETEAGEKDEHEGQSETQADDTEVKDETGEQELNAENQGEAkQDEKGVDGGGGSDGGDSEEE-EEEEE-----EEE 874
                          250
                   ....*....|....*....
gi 2024420674  685 SESQVDKEALKENKKESEP 703
Cdd:TIGR00927  875 EEEEEEEEEEEEEEENEEP 893
MSCRAMM_ClfA NF033609
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial ...
643-879 1.35e-05

MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules). It is heavily studied in Staphylococcus aureus both for its biological role in adhesion and for its potential for vaccination. Features of the sequence, but also of other MSCRAMM adhesins, include a long run of Ser-Asp dipeptide repeats and a C-terminal cell wall anchoring LPXTG motif.


Pssm-ID: 468110 [Multi-domain]  Cd Length: 934  Bit Score: 49.14  E-value: 1.35e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024420674 643 SEETTGDTEDEKNTSLESEAQNADKQEEGESKEESIVCHSVTSESQVDKEALKENKKESEPADHQGDGFTSVEDADSSLA 722
Cdd:NF033609  618 SASDSDSASDSDSASDSDSASDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 697
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024420674 723 LKAELDENASEQLKLEGQAEEEQEDDGDA-FDFDEDSEQTVETDEKCDGEEVDAQSEEDDRTNSVIRKTAQTGEAGEGSG 801
Cdd:NF033609  698 SDSDSDSDSDSDSDSDSDSDSDSDSDSDSdSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 777
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2024420674 802 KIETSDTLTEDDSLQHKEGNESEETELSQEEASALETDEKADVLADEDKASDPNEVEKEPGEQDLESAGCSRAESKED 879
Cdd:NF033609  778 SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 855
PTZ00121 PTZ00121
MAEBL; Provisional
551-859 4.10e-04

MAEBL; Provisional


Pssm-ID: 173412 [Multi-domain]  Cd Length: 2084  Bit Score: 44.36  E-value: 4.10e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024420674  551 AEKQEKASESVGSANEVEGN--VLHQTEPDMDSVKEMAAQETSLDPDFSDDEIEETEMQTGDVSGKGEgnriedlEHNTT 628
Cdd:PTZ00121  1232 AEEAKKDAEEAKKAEEERNNeeIRKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKADEAKKAE-------EKKKA 1304
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024420674  629 EDLKPKAELQTVQCSEETTGDTEDEKNTSLESEAQNADKQEEGESKEESIVCHSVTSESQVDKEALKENKKESEPADHQG 708
Cdd:PTZ00121  1305 DEAKKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAK 1384
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024420674  709 DGFTSVEDADsSLALKAELDENASEQLKLEGQAEEEQED-DGDAFDFDEDSEQTVETDEKCDGEEVDAQSEEDDRTNSVI 787
Cdd:PTZ00121  1385 KKAEEKKKAD-EAKKKAEEDKKKADELKKAAAAKKKADEaKKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKAEEAK 1463
                          250       260       270       280       290       300       310
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2024420674  788 RKTAQTGEAGEGSGKIETSDTL------TEDDSLQHKEGNESEETELSQEEASALETDEKADVLADEDKASDPNEVEK 859
Cdd:PTZ00121  1464 KKAEEAKKADEAKKKAEEAKKAdeakkkAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEAKKAEEAKKADEAKK 1541
MDN1 COG5271
Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal ...
487-870 3.85e-03

Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis];


Pssm-ID: 444083 [Multi-domain]  Cd Length: 1028  Bit Score: 41.15  E-value: 3.85e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024420674  487 ESGAPSDPNEEGGDQAHIQPVSSEVGELALLEEQNTQEQTELKPAEKDGQEEVLIGNLEACSDPAEKQEKASESVGSANE 566
Cdd:COG5271    301 PESDDDADDSTLAALEGAAEDTEIATADELAAADDEDDDDSAAEDAAEEAATAEDSAAEDTQDAEDEAAGEAADESEGAD 380
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024420674  567 VEGNVLHQTEPDMDSVKEMAAQETSLDPDFSDDEIEETEMQTGDvSGKGEGNRIEDLEHNTTEDLKPKAELQTVQCSEET 646
Cdd:COG5271    381 TDAAADEADAAADDSADDEEASADGGTSPTSDTDEEEEEADEDA-SAGETEDESTDVTSAEDDIATDEEADSLADEEEEA 459
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024420674  647 TGDTEDEKNTSLESEAQNADKQEEGESKEESIVChSVTSESQVDKEALKENKKESEPADH--QGDGFTSVEDADSSLALK 724
Cdd:COG5271    460 EAELDTEEDTESAEEDADGDEATDEDDASDDGDE-EEAEEDAEAEADSDELTAEETSADDgaDTDAAADPEDSDEDALED 538
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024420674  725 AELDENASEQLKLEGQAEEEQEDDGDAFDFDEDSEQTVETDEKCDGEEVDAQSEEDDRTNSVIRKTAQTGEAGEGSGKIE 804
Cdd:COG5271    539 ETEGEENAPGSDQDADETDEPEATAEEDEPDEAEAETEDATENADADETEESADESEEAEASEDEAAEEEEADDDEADAD 618
                          330       340       350       360       370       380
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2024420674  805 TSDTLTEDDSLQHKEGNESEETELSQEEASALETDEKADVLADEDKASDPNEVEKEPGEQDLESAG 870
Cdd:COG5271    619 ADGAADEEETEEEAAEDEAAEPETDASEAADEDADAETEAEASADESEEEAEDESETSSEDAEEDA 684
 
Name Accession Description Interval E-value
LRRFIP pfam09738
LRRFIP family; LRRFIP1 is a transcriptional repressor which preferentially binds to the ...
13-219 3.49e-58

LRRFIP family; LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin.


Pssm-ID: 462869 [Multi-domain]  Cd Length: 303  Bit Score: 201.46  E-value: 3.49e-58
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024420674  13 QIEERPEKDF----------EKGARTVSSLSAATLASLGGTSSRRGSGDTSISADTEASIREIKDSLAEVEEKYKKAMVS 82
Cdd:pfam09738  29 EVEENADRVFdmssssgadtASGSPTASTTSAGTLNSLGGTSSRRSSEDSSISLEDEGSLRDIKHELKEVEEKYRKAMIS 108
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024420674  83 NAQLDNEKTNFMYQVDTLKDALLELEEQLAESRRQYEEKSKEFEREKHAHSILQFQFKEIKEALKQREEMLAKHGIIPDS 162
Cdd:pfam09738 109 NAQLDNEKSNLMYQVDLLKDKLEEMEESLAELQRELREKNKELERLKRNLRRLQFQLAELKEQLKQRDELIEKHGLVIVP 188
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2024420674 163 DIATNGEasdvlDNEGHLDSSKTV--QGTTQALKTAGDGMLG--KANEVDMKNEILEDVGK 219
Cdd:pfam09738 189 DENTNGE-----EENSPADAKRALvsVEAAEVLESAGEGSLDvrLKKLADEKEELLDEVRK 244
2A1904 TIGR00927
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ...
589-840 2.24e-07

K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273344 [Multi-domain]  Cd Length: 1096  Bit Score: 55.00  E-value: 2.24e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024420674  589 ETSLDPDFSDDEIEETEMQT-GDVSGKGEGNRIEDLEHNTTEDLKPKAELQTVqcSEETTGDTE-DEKNTSLESEAQNAD 666
Cdd:TIGR00927  650 ERPTEAEGENGEESGGEAEQeGETETKGENESEGEIPAERKGEQEGEGEIEAK--EADHKGETEaEEVEHEGETEAEGTE 727
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024420674  667 KQEEGESKEESIVCHSvTSESQVDKEALKENKKESEPADHQGDGFTSVEDADSSLALKAELDENASEQLKLEGQAEEEQE 746
Cdd:TIGR00927  728 DEGEIETGEEGEEVED-EGEGEAEGKHEVETEGDRKETEHEGETEAEGKEDEDEGEIQAGEDGEMKGDEGAEGKVEHEGE 806
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024420674  747 DDGDAFDFDEDSEQTVETDEKCDGEEVDAQSEEDDRTNSVIRKTAQTGEAGEGSGKIETSDTLTEDDSLQHKEGNESEET 826
Cdd:TIGR00927  807 TEAGEKDEHEGQSETQADDTEVKDETGEQELNAENQGEAKQDEKGVDGGGGSDGGDSEEEEEEEEEEEEEEEEEEEEEEE 886
                          250
                   ....*....|....
gi 2024420674  827 ELSQEEASALETDE 840
Cdd:TIGR00927  887 EEENEEPLSLEWPE 900
2A1904 TIGR00927
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ...
595-866 1.44e-06

K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273344 [Multi-domain]  Cd Length: 1096  Bit Score: 52.31  E-value: 1.44e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024420674  595 DFSDDEIEETEmQTGDVSGkGEGNRIEDLEHNTTEDLKPKAEL---QTVQCSEETTGDTEDEK--NTSLESEAQNADKQE 669
Cdd:TIGR00927  629 DLSKGDVAEAE-HTGERTG-EEGERPTEAEGENGEESGGEAEQegeTETKGENESEGEIPAERkgEQEGEGEIEAKEADH 706
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024420674  670 EGESKEESIVCHSVTSESQVDKEALKENKKESEPADHQGDGftsveDADSSLALKAELDENASEQLKLEGQAEEEQEDDG 749
Cdd:TIGR00927  707 KGETEAEEVEHEGETEAEGTEDEGEIETGEEGEEVEDEGEG-----EAEGKHEVETEGDRKETEHEGETEAEGKEDEDEG 781
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024420674  750 DaFDFDEDSEQTVETDEKCDGEEVDAQSEEDDRTNSVIRKTAQTGEAGEGSgkiETSDTLTEDDSLQHKEGNESEETELS 829
Cdd:TIGR00927  782 E-IQAGEDGEMKGDEGAEGKVEHEGETEAGEKDEHEGQSETQADDTEVKDE---TGEQELNAENQGEAKQDEKGVDGGGG 857
                          250       260       270
                   ....*....|....*....|....*....|....*..
gi 2024420674  830 QEEASALETDEKADVLADEDKASDPNEVEKEPGEQDL 866
Cdd:TIGR00927  858 SDGGDSEEEEEEEEEEEEEEEEEEEEEEEEEENEEPL 894
2A1904 TIGR00927
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ...
455-703 1.73e-06

K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273344 [Multi-domain]  Cd Length: 1096  Bit Score: 51.92  E-value: 1.73e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024420674  455 GDRAGEQNEVWSAVQGQKMERDSTGLE--------GEESCESGAPSDPNEEGGDQAHIQPVSSEVGELALLEEQNTQEQT 526
Cdd:TIGR00927  642 GERTGEEGERPTEAEGENGEESGGEAEqegetetkGENESEGEIPAERKGEQEGEGEIEAKEADHKGETEAEEVEHEGET 721
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024420674  527 ELKPAEKDGQEEVLIGNlEACSDPAEKQEKASESVGS-ANEVEGNVLHQTEPDMDSVKEMAAQETSLDPDFSDDEIEETE 605
Cdd:TIGR00927  722 EAEGTEDEGEIETGEEG-EEVEDEGEGEAEGKHEVETeGDRKETEHEGETEAEGKEDEDEGEIQAGEDGEMKGDEGAEGK 800
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024420674  606 MQTGDVSGKGEGNRIEDLEHNTTEDLKPKAELQTVQCSEETTGDT-EDEKNTSLESEAQNADKQEEgESKEEsivchSVT 684
Cdd:TIGR00927  801 VEHEGETEAGEKDEHEGQSETQADDTEVKDETGEQELNAENQGEAkQDEKGVDGGGGSDGGDSEEE-EEEEE-----EEE 874
                          250
                   ....*....|....*....
gi 2024420674  685 SESQVDKEALKENKKESEP 703
Cdd:TIGR00927  875 EEEEEEEEEEEEEEENEEP 893
2A1904 TIGR00927
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ...
644-879 3.66e-06

K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273344 [Multi-domain]  Cd Length: 1096  Bit Score: 51.15  E-value: 3.66e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024420674  644 EETTGDTEDEKNTSLESEAQNADKQEE-GESKEESivchSVTSESQVDKEAlkENKKESEPADHQGDgfTSVEDADSSLA 722
Cdd:TIGR00927  649 GERPTEAEGENGEESGGEAEQEGETETkGENESEG----EIPAERKGEQEG--EGEIEAKEADHKGE--TEAEEVEHEGE 720
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024420674  723 LKAELDENASEQLKLEGQAEEEQEDDGDAfDFDEDSEQTVETDEKCDGEEVDAQSEEDDRTNSVirktaQTGEAGEGSG- 801
Cdd:TIGR00927  721 TEAEGTEDEGEIETGEEGEEVEDEGEGEA-EGKHEVETEGDRKETEHEGETEAEGKEDEDEGEI-----QAGEDGEMKGd 794
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024420674  802 -----KIETSDTLTEDDSLQHKEG-----------NESEETELSQEEASALETDEKAdvlADEDKASDPNEVEKEPGEQD 865
Cdd:TIGR00927  795 egaegKVEHEGETEAGEKDEHEGQsetqaddtevkDETGEQELNAENQGEAKQDEKG---VDGGGGSDGGDSEEEEEEEE 871
                          250
                   ....*....|....
gi 2024420674  866 LESAGCSRAESKED 879
Cdd:TIGR00927  872 EEEEEEEEEEEEEE 885
MSCRAMM_ClfA NF033609
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial ...
643-879 1.35e-05

MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules). It is heavily studied in Staphylococcus aureus both for its biological role in adhesion and for its potential for vaccination. Features of the sequence, but also of other MSCRAMM adhesins, include a long run of Ser-Asp dipeptide repeats and a C-terminal cell wall anchoring LPXTG motif.


Pssm-ID: 468110 [Multi-domain]  Cd Length: 934  Bit Score: 49.14  E-value: 1.35e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024420674 643 SEETTGDTEDEKNTSLESEAQNADKQEEGESKEESIVCHSVTSESQVDKEALKENKKESEPADHQGDGFTSVEDADSSLA 722
Cdd:NF033609  618 SASDSDSASDSDSASDSDSASDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 697
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024420674 723 LKAELDENASEQLKLEGQAEEEQEDDGDA-FDFDEDSEQTVETDEKCDGEEVDAQSEEDDRTNSVIRKTAQTGEAGEGSG 801
Cdd:NF033609  698 SDSDSDSDSDSDSDSDSDSDSDSDSDSDSdSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 777
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2024420674 802 KIETSDTLTEDDSLQHKEGNESEETELSQEEASALETDEKADVLADEDKASDPNEVEKEPGEQDLESAGCSRAESKED 879
Cdd:NF033609  778 SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 855
2A1904 TIGR00927
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ...
645-879 2.21e-04

K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273344 [Multi-domain]  Cd Length: 1096  Bit Score: 44.99  E-value: 2.21e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024420674  645 ETTGD-TEDEKNTSLESEAQNaDKQEEGESKEESivchsvtsesqvDKEALKENKKESE-PADHQGDGFTSVEDADSSLA 722
Cdd:TIGR00927  639 EHTGErTGEEGERPTEAEGEN-GEESGGEAEQEG------------ETETKGENESEGEiPAERKGEQEGEGEIEAKEAD 705
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024420674  723 LKAELDENaseqlklEGQAEEEQEDDGDafdfdeDSEQTVETDEkcDGEEvdaQSEEDDRTNSVIRKTAQTGEAGEGSGK 802
Cdd:TIGR00927  706 HKGETEAE-------EVEHEGETEAEGT------EDEGEIETGE--EGEE---VEDEGEGEAEGKHEVETEGDRKETEHE 767
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024420674  803 IETSDTLTEDD---SLQHKEGNE---SEETELSQEEASALETDEKADVLADEDKASDPNEVEKEPGEQDLESAgcSRAES 876
Cdd:TIGR00927  768 GETEAEGKEDEdegEIQAGEDGEmkgDEGAEGKVEHEGETEAGEKDEHEGQSETQADDTEVKDETGEQELNAE--NQGEA 845

                   ...
gi 2024420674  877 KED 879
Cdd:TIGR00927  846 KQD 848
PTZ00121 PTZ00121
MAEBL; Provisional
551-859 4.10e-04

MAEBL; Provisional


Pssm-ID: 173412 [Multi-domain]  Cd Length: 2084  Bit Score: 44.36  E-value: 4.10e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024420674  551 AEKQEKASESVGSANEVEGN--VLHQTEPDMDSVKEMAAQETSLDPDFSDDEIEETEMQTGDVSGKGEgnriedlEHNTT 628
Cdd:PTZ00121  1232 AEEAKKDAEEAKKAEEERNNeeIRKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKADEAKKAE-------EKKKA 1304
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024420674  629 EDLKPKAELQTVQCSEETTGDTEDEKNTSLESEAQNADKQEEGESKEESIVCHSVTSESQVDKEALKENKKESEPADHQG 708
Cdd:PTZ00121  1305 DEAKKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAK 1384
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024420674  709 DGFTSVEDADsSLALKAELDENASEQLKLEGQAEEEQED-DGDAFDFDEDSEQTVETDEKCDGEEVDAQSEEDDRTNSVI 787
Cdd:PTZ00121  1385 KKAEEKKKAD-EAKKKAEEDKKKADELKKAAAAKKKADEaKKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKAEEAK 1463
                          250       260       270       280       290       300       310
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2024420674  788 RKTAQTGEAGEGSGKIETSDTL------TEDDSLQHKEGNESEETELSQEEASALETDEKADVLADEDKASDPNEVEK 859
Cdd:PTZ00121  1464 KKAEEAKKADEAKKKAEEAKKAdeakkkAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEAKKAEEAKKADEAKK 1541
2A1904 TIGR00927
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ...
697-879 1.09e-03

K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273344 [Multi-domain]  Cd Length: 1096  Bit Score: 43.06  E-value: 1.09e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024420674  697 NKKESEPADHQGDgfTSVEDADSSLALKAELDENASEQLKLEGQAEEEQEDDGDAfDFDEDSEQTVETDEKCDGEEVDAQ 776
Cdd:TIGR00927  631 SKGDVAEAEHTGE--RTGEEGERPTEAEGENGEESGGEAEQEGETETKGENESEG-EIPAERKGEQEGEGEIEAKEADHK 707
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024420674  777 SEEDDRTNSVIRKTAQTGEAGEGSGKIETSDTLTEDDSLQHKEGNESEETElSQEEASALETDEKADVLADEDK----AS 852
Cdd:TIGR00927  708 GETEAEEVEHEGETEAEGTEDEGEIETGEEGEEVEDEGEGEAEGKHEVETE-GDRKETEHEGETEAEGKEDEDEgeiqAG 786
                          170       180
                   ....*....|....*....|....*..
gi 2024420674  853 DPNEVEKEPGEQDLESAGCSRAESKED 879
Cdd:TIGR00927  787 EDGEMKGDEGAEGKVEHEGETEAGEKD 813
PRK13108 PRK13108
prolipoprotein diacylglyceryl transferase; Reviewed
698-870 1.61e-03

prolipoprotein diacylglyceryl transferase; Reviewed


Pssm-ID: 237284 [Multi-domain]  Cd Length: 460  Bit Score: 41.89  E-value: 1.61e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024420674 698 KKESEPADHQGDGFTSVEDADSSLALKAELDENASEQ-LKLEGQAEEEQEDDGDAFDFDEDSEQTVETDEKCDGEEVDAQ 776
Cdd:PRK13108  277 KGREAPGALRGSEYVVDEALEREPAELAAAAVASAASaVGPVGPGEPNQPDDVAEAVKAEVAEVTDEVAAESVVQVADRD 356
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024420674 777 SEEDDRTNSVIRKTAQTGEAGEGSGkiETSDTLTEDDSLQHKEGNESEETELSQEEASALETDEKADVLADEDKASDPNE 856
Cdd:PRK13108  357 GESTPAVEETSEADIEREQPGDLAG--QAPAAHQVDAEAASAAPEEPAALASEAHDETEPEVPEKAAPIPDPAKPDELAV 434
                         170
                  ....*....|....
gi 2024420674 857 VEKEPGEQDLESAG 870
Cdd:PRK13108  435 AGPGDDPAEPDGIR 448
PTZ00121 PTZ00121
MAEBL; Provisional
496-878 2.10e-03

MAEBL; Provisional


Pssm-ID: 173412 [Multi-domain]  Cd Length: 2084  Bit Score: 42.05  E-value: 2.10e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024420674  496 EEGGDQAHIQPVSSEVGELALLEEQNTQEQTELKPAEKDGQEEvLIGNLEACSDPAEKQEKASESVGSANEVEGNVLHQT 575
Cdd:PTZ00121  1353 EAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADE-AKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKK 1431
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024420674  576 EPDMDSVK-EMAAQETSLDPDFSDDEIEETEMQTGDVSGKGEGNRIEDLEHNTTEDLKPKAElQTVQCSEETTGDTEDEK 654
Cdd:PTZ00121  1432 KADEAKKKaEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKKAE-EAKKKADEAKKAAEAKK 1510
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024420674  655 NTSLESEAQNADKQEEGESKEESIVCHSVTSESQVDKEALKENKKESEPADHQgdgfTSVEDADSSLALKAELDENASEQ 734
Cdd:PTZ00121  1511 KADEAKKAEEAKKADEAKKAEEAKKADEAKKAEEKKKADELKKAEELKKAEEK----KKAEEAKKAEEDKNMALRKAEEA 1586
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024420674  735 LKLEGQAEEEQEDDGDAFDFDEDSEQTVETDEKCDGEEVDAQSEEDDRTNSVIRKTAQTGEAGEGSGKIETSDTL----- 809
Cdd:PTZ00121  1587 KKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIkaaee 1666
                          330       340       350       360       370       380       390
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2024420674  810 ---TEDDSLQHKEGNESEETELSQEEASALETDEKADV----LADEDKASDPNEVEKEPGEQDLESAGCSRAESKE 878
Cdd:PTZ00121  1667 akkAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAeelkKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEED 1742
MDN1 COG5271
Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal ...
487-870 3.85e-03

Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis];


Pssm-ID: 444083 [Multi-domain]  Cd Length: 1028  Bit Score: 41.15  E-value: 3.85e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024420674  487 ESGAPSDPNEEGGDQAHIQPVSSEVGELALLEEQNTQEQTELKPAEKDGQEEVLIGNLEACSDPAEKQEKASESVGSANE 566
Cdd:COG5271    301 PESDDDADDSTLAALEGAAEDTEIATADELAAADDEDDDDSAAEDAAEEAATAEDSAAEDTQDAEDEAAGEAADESEGAD 380
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024420674  567 VEGNVLHQTEPDMDSVKEMAAQETSLDPDFSDDEIEETEMQTGDvSGKGEGNRIEDLEHNTTEDLKPKAELQTVQCSEET 646
Cdd:COG5271    381 TDAAADEADAAADDSADDEEASADGGTSPTSDTDEEEEEADEDA-SAGETEDESTDVTSAEDDIATDEEADSLADEEEEA 459
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024420674  647 TGDTEDEKNTSLESEAQNADKQEEGESKEESIVChSVTSESQVDKEALKENKKESEPADH--QGDGFTSVEDADSSLALK 724
Cdd:COG5271    460 EAELDTEEDTESAEEDADGDEATDEDDASDDGDE-EEAEEDAEAEADSDELTAEETSADDgaDTDAAADPEDSDEDALED 538
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024420674  725 AELDENASEQLKLEGQAEEEQEDDGDAFDFDEDSEQTVETDEKCDGEEVDAQSEEDDRTNSVIRKTAQTGEAGEGSGKIE 804
Cdd:COG5271    539 ETEGEENAPGSDQDADETDEPEATAEEDEPDEAEAETEDATENADADETEESADESEEAEASEDEAAEEEEADDDEADAD 618
                          330       340       350       360       370       380
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2024420674  805 TSDTLTEDDSLQHKEGNESEETELSQEEASALETDEKADVLADEDKASDPNEVEKEPGEQDLESAG 870
Cdd:COG5271    619 ADGAADEEETEEEAAEDEAAEPETDASEAADEDADAETEAEASADESEEEAEDESETSSEDAEEDA 684
BMS1 COG5192
GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and ...
445-867 8.95e-03

GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis];


Pssm-ID: 227519 [Multi-domain]  Cd Length: 1077  Bit Score: 39.72  E-value: 8.95e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024420674  445 CTGGTADKTGGDRAGEQNEV----WSAVQGQKMERDSTGLEGEESCESgapSDPNEEGGDQahiqpvssevgelallEEQ 520
Cdd:COG5192    305 CPPPDADHGRRRRLSLKSKLiyspMSDIGGILKDKDRVYIEVPTSNFS---KDENSEAGEG----------------EKM 365
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024420674  521 NTQEQTELKPAEKDGQEEVLIGNLEAcSDPAEKQEKASESVG--SANEVEGNVLHQTEPDMDSVKEMAAQETSLDpdfsD 598
Cdd:COG5192    366 KMQLQEIEQDPGVDGVGLQLFSNSDA-IDTVDRESSEIDNVGrkTRRQPTGKAIAEETSREDELSFDDSDVSTSD----E 440
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024420674  599 DEIEETEMQTGDVSGKGE-GNRIEDLEHNTTEDlkpkaelqtvqcseettgdtEDEKNTSLESEAQNADKQEEGESKEES 677
Cdd:COG5192    441 NEDVDFTGKKGAINNEDEsDNEEVAFDSDSQFD--------------------ESEGNLRWKEGLASKLAYSQSGKRGRN 500
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024420674  678 IVcHSVTSESQVDKEALKENKKESEPA--------DHQGDGFTSVEDADSSLALKAE-LDENASEQL--KLEGQAEEEQE 746
Cdd:COG5192    501 IQ-KIFYDESLSPEECIEEYKGESAKSsesdlvvqDEPEDFFDVSKVANESISSNHEkLMESEFEELkkKWSSLAQLKSR 579
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024420674  747 DDGDA-FDFDEDSEQTVETDEKCDGEEVDAQSEEDDRTNSVIRKTAQTGEAGEGSgkietsdtlTEDDSLQHKEGNESEE 825
Cdd:COG5192    580 FQKDAtLDSIEGEEELIQDDEKGNFEDLEDEENSSDNEMEESRGSSVTAENEESA---------DEVDYETEREENARKK 650
                          410       420       430       440
                   ....*....|....*....|....*....|....*....|..
gi 2024420674  826 TELSQEeasaLETDEKADvlaDEDKASDPNEVEKEPGEQDLE 867
Cdd:COG5192    651 EELRGN----FELEERGD---PEKKDVDWYTEEKRKIEEQLK 685
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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