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Conserved domains on  [gi|118096804|ref|XP_414310|]
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MKRN2 opposite strand protein [Gallus gallus]

Protein Classification

MKRN2 opposite strand protein( domain architecture ID 11240493)

MKRN2 opposite strand protein (MKRN2OS) is a DUF4796 domain-containing protein

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
DUF4796 pfam16044
Domain of unknown function (DUF4796); This family of proteins is functionally uncharacterized. ...
6-195 7.36e-99

Domain of unknown function (DUF4796); This family of proteins is functionally uncharacterized. This family of proteins is found in eukaryotes. Proteins in this family are typically between 194 and 289 amino acids in length. There is a single completely conserved residue C that may be functionally important.


:

Pssm-ID: 464991  Cd Length: 189  Bit Score: 284.89  E-value: 7.36e-99
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118096804    6 ILRVRHCGAAIFCRRAPPLCPACGRPLRGAGLRSAPVRLPCPFRHGHRQPRAFLLRPSAGSFLGEYDGNSDLHVGISSTQ 85
Cdd:pfam16044   3 LICFRHCDKNIFCFNVPAQCPVCGEPLSNTRLEEPPFRVPYPFVNGHQNPCSILIKPTHGDFLRDYDNGSDLHIGITDSK 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118096804   86 GVVYNYNEEGIHRDGTGWEQCIsvpLVQPDMFELLQQWDHLLEEFSMREEWLPHRYEEHDHNCYTYALAFINSVLTAQGK 165
Cdd:pfam16044  83 GDVYEYDENGVQRDTAGWEQCL---LVQPVMESWLDQWDEVLEQFSTSDMWSSERYEEESHNCYTFVLTFLNALLYAELS 159
                         170       180       190
                  ....*....|....*....|....*....|
gi 118096804  166 QQMSKSEFTEKFVIPQTKNASKYITVHQEL 195
Cdd:pfam16044 160 SALSKEDFCEKFILPRTKRAAKYISLYRKI 189
 
Name Accession Description Interval E-value
DUF4796 pfam16044
Domain of unknown function (DUF4796); This family of proteins is functionally uncharacterized. ...
6-195 7.36e-99

Domain of unknown function (DUF4796); This family of proteins is functionally uncharacterized. This family of proteins is found in eukaryotes. Proteins in this family are typically between 194 and 289 amino acids in length. There is a single completely conserved residue C that may be functionally important.


Pssm-ID: 464991  Cd Length: 189  Bit Score: 284.89  E-value: 7.36e-99
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118096804    6 ILRVRHCGAAIFCRRAPPLCPACGRPLRGAGLRSAPVRLPCPFRHGHRQPRAFLLRPSAGSFLGEYDGNSDLHVGISSTQ 85
Cdd:pfam16044   3 LICFRHCDKNIFCFNVPAQCPVCGEPLSNTRLEEPPFRVPYPFVNGHQNPCSILIKPTHGDFLRDYDNGSDLHIGITDSK 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118096804   86 GVVYNYNEEGIHRDGTGWEQCIsvpLVQPDMFELLQQWDHLLEEFSMREEWLPHRYEEHDHNCYTYALAFINSVLTAQGK 165
Cdd:pfam16044  83 GDVYEYDENGVQRDTAGWEQCL---LVQPVMESWLDQWDEVLEQFSTSDMWSSERYEEESHNCYTFVLTFLNALLYAELS 159
                         170       180       190
                  ....*....|....*....|....*....|
gi 118096804  166 QQMSKSEFTEKFVIPQTKNASKYITVHQEL 195
Cdd:pfam16044 160 SALSKEDFCEKFILPRTKRAAKYISLYRKI 189
 
Name Accession Description Interval E-value
DUF4796 pfam16044
Domain of unknown function (DUF4796); This family of proteins is functionally uncharacterized. ...
6-195 7.36e-99

Domain of unknown function (DUF4796); This family of proteins is functionally uncharacterized. This family of proteins is found in eukaryotes. Proteins in this family are typically between 194 and 289 amino acids in length. There is a single completely conserved residue C that may be functionally important.


Pssm-ID: 464991  Cd Length: 189  Bit Score: 284.89  E-value: 7.36e-99
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118096804    6 ILRVRHCGAAIFCRRAPPLCPACGRPLRGAGLRSAPVRLPCPFRHGHRQPRAFLLRPSAGSFLGEYDGNSDLHVGISSTQ 85
Cdd:pfam16044   3 LICFRHCDKNIFCFNVPAQCPVCGEPLSNTRLEEPPFRVPYPFVNGHQNPCSILIKPTHGDFLRDYDNGSDLHIGITDSK 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118096804   86 GVVYNYNEEGIHRDGTGWEQCIsvpLVQPDMFELLQQWDHLLEEFSMREEWLPHRYEEHDHNCYTYALAFINSVLTAQGK 165
Cdd:pfam16044  83 GDVYEYDENGVQRDTAGWEQCL---LVQPVMESWLDQWDEVLEQFSTSDMWSSERYEEESHNCYTFVLTFLNALLYAELS 159
                         170       180       190
                  ....*....|....*....|....*....|
gi 118096804  166 QQMSKSEFTEKFVIPQTKNASKYITVHQEL 195
Cdd:pfam16044 160 SALSKEDFCEKFILPRTKRAAKYISLYRKI 189
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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