|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00119 |
cytochrome b; Provisional |
1-380 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214425 [Multi-domain] Cd Length: 380 Bit Score: 662.37 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154760709 1 MIHQLRKSNPLLKLMNNSLIDLPTPSNISYWWNFGSLLGFTLLIQLASGILLMMHFLADDTMAFMSVAYTSREVWYGWLI 80
Cdd:MTH00119 1 MAPNLRKSHPLLKIINNSLIDLPTPSNISAWWNFGSLLGLCLITQILTGLFLAMHYTADISLAFSSVAHICRDVQYGWLI 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154760709 81 RSLHANGASLFFLCIFLHMGRGLYYGSYLHENTWNIGVLLLLLLMATAFMGYVLPWGQMSFWGATVITNLMSAIPYMGDS 160
Cdd:MTH00119 81 RNLHANGASMFFICIYLHIGRGLYYGSYLYKETWNTGVILLLLLMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQT 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154760709 161 IVTWIWGGPSVNSATLTRFTTLHFLLPFILMAAIITHLIFLHEHGSFNPLGLTSNADKIPFHPYFSTKDAVGAIMATIML 240
Cdd:MTH00119 161 LVEWIWGGFSVDNPTLTRFFALHFLLPFLIAGLTLIHLLFLHETGSNNPLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154760709 241 TTLAFYFPNLLGDPENFTPADPMKTPDHIKPEWYFLFAYTILRSIPNKLMGVIAMFMSILVLLLMPMLHTSKQQSMSLRP 320
Cdd:MTH00119 241 LTLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASILILFLMPFLHTSKQRSMTFRP 320
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 154760709 321 LSQLLFWTLTADFLILTWIGGQPVQDPYILIGQMASSVYFFTILILLPLAGTIENMLIKP 380
Cdd:MTH00119 321 LSQLLFWTLVANLLILTWIGSQPVEHPFIIIGQLASILYFTILLILFPLLGALENKMLNY 380
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
15-382 |
6.15e-127 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 370.66 E-value: 6.15e-127
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154760709 15 MNNSLIDLPTPSNISYWWNFGSLLGFTLLIQLASGILLMMHFLADDTMAFMSVAYTSREVWYGWLIRSLHANGASLFFLC 94
Cdd:COG1290 23 LVREHLEYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAA 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154760709 95 IFLHMGRGLYYGSYL--HENTWNIGVLLLLLLMATAFMGYVLPWGQMSFWGATVITNLMSAIPYMGDSIVTWIWGGPSVN 172
Cdd:COG1290 103 VYLHMFRGFFYGAYKkpRELNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFPG 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154760709 173 SATLTRFTTLH-FLLPFILMAAIITHLIFLHEHGSFNPLG----LTSNADKIPFHPYFSTKDAVGAIMATIMLTTLAFYF 247
Cdd:COG1290 183 DATLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGperkKTEKVDGVPFHPYYTVKDGFGFFVFLGVFALLAFFF 262
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154760709 248 PNllGDPENFTPADPMKTPDHIKPEWYFLFAYTILRSIP--NKLMGVIAMFMSILVLLLMPMLHTSKQQSMSLRPLSQLL 325
Cdd:COG1290 263 PI--NPPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRPVRTAL 340
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 154760709 326 FWTLTADFLILTWIGGQPvqDPYILIGQMASSVYFFTILILLPLAGTIENMliKPLQ 382
Cdd:COG1290 341 GVAFIVFFIVLTILGANP--PIATLLGSINTVTYFAFFLIVLPILAFIEKT--KPLP 393
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
10-206 |
2.28e-82 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 249.98 E-value: 2.28e-82
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154760709 10 PLLKLMNNSLIDLPTPSNISYWWNFGSLLGFTLLIQLASGILLMMHFLADDTMAFMSVAYTSREVWYGWLIRSLHANGAS 89
Cdd:cd00284 1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154760709 90 LFFLCIFLHMGRGLYYGSY--LHENTWNIGVLLLLLLMATAFMGYVLPWGQMSFWGATVITNLMSAIPYMGDSIVTWIWG 167
Cdd:cd00284 81 MFFLMLYLHIFRGLYYGSYkkPRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160
|
170 180 190
....*....|....*....|....*....|....*....
gi 154760709 168 GPSVNSATLTRFTTLHFLLPFILMAAIITHLIFLHEHGS 206
Cdd:cd00284 161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGS 199
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
19-205 |
5.00e-73 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 225.72 E-value: 5.00e-73
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154760709 19 LIDLPTPSNISYWWNFGSLLGFTLLIQLASGILLMMHFLADDTMAFMSVAYTSREVWYGWLIRSLHANGASLFFLCIFLH 98
Cdd:pfam00033 1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154760709 99 MGRGLYYG--SYLHENTWNIGVLLLLLLMATAFMGYVLPWGQMSFWGATVITNLMSAIPYMGDSIVTWIWGGPSVNSATL 176
Cdd:pfam00033 81 IFRGLYYGgfSYPRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160
|
170 180
....*....|....*....|....*....
gi 154760709 177 TRFTTLHFLLPFILMAAIITHLIFLHEHG 205
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
| cytb6/f_IV |
TIGR01156 |
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ... |
234-340 |
1.03e-10 |
|
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]
Pssm-ID: 130224 [Multi-domain] Cd Length: 159 Bit Score: 59.81 E-value: 1.03e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154760709 234 IMATI-MLTTLAFYFPNLLGDPenftpADPMKTPDHIKPEWYFLFAYTILRSIPNKLMGVIAMFMSILVLLLMPMLHT-S 311
Cdd:TIGR01156 44 ILGTIaCVVGLAVLDPAMIGEP-----ANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIENvN 118
|
90 100
....*....|....*....|....*....
gi 154760709 312 KQQSMSLRPLSQLLFWTLTadfLILTWIG 340
Cdd:TIGR01156 119 KFQNPFRRPVATTVFLFGT---VVALWLG 144
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00119 |
cytochrome b; Provisional |
1-380 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214425 [Multi-domain] Cd Length: 380 Bit Score: 662.37 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154760709 1 MIHQLRKSNPLLKLMNNSLIDLPTPSNISYWWNFGSLLGFTLLIQLASGILLMMHFLADDTMAFMSVAYTSREVWYGWLI 80
Cdd:MTH00119 1 MAPNLRKSHPLLKIINNSLIDLPTPSNISAWWNFGSLLGLCLITQILTGLFLAMHYTADISLAFSSVAHICRDVQYGWLI 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154760709 81 RSLHANGASLFFLCIFLHMGRGLYYGSYLHENTWNIGVLLLLLLMATAFMGYVLPWGQMSFWGATVITNLMSAIPYMGDS 160
Cdd:MTH00119 81 RNLHANGASMFFICIYLHIGRGLYYGSYLYKETWNTGVILLLLLMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQT 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154760709 161 IVTWIWGGPSVNSATLTRFTTLHFLLPFILMAAIITHLIFLHEHGSFNPLGLTSNADKIPFHPYFSTKDAVGAIMATIML 240
Cdd:MTH00119 161 LVEWIWGGFSVDNPTLTRFFALHFLLPFLIAGLTLIHLLFLHETGSNNPLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154760709 241 TTLAFYFPNLLGDPENFTPADPMKTPDHIKPEWYFLFAYTILRSIPNKLMGVIAMFMSILVLLLMPMLHTSKQQSMSLRP 320
Cdd:MTH00119 241 LTLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASILILFLMPFLHTSKQRSMTFRP 320
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 154760709 321 LSQLLFWTLTADFLILTWIGGQPVQDPYILIGQMASSVYFFTILILLPLAGTIENMLIKP 380
Cdd:MTH00119 321 LSQLLFWTLVANLLILTWIGSQPVEHPFIIIGQLASILYFTILLILFPLLGALENKMLNY 380
|
|
| CYTB |
MTH00100 |
cytochrome b; Provisional |
5-379 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177162 [Multi-domain] Cd Length: 379 Bit Score: 598.16 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154760709 5 LRKSNPLLKLMNNSLIDLPTPSNISYWWNFGSLLGFTLLIQLASGILLMMHFLADDTMAFMSVAYTSREVWYGWLIRSLH 84
Cdd:MTH00100 4 IRKTHPLMKIINHSFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYLH 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154760709 85 ANGASLFFLCIFLHMGRGLYYGSYLHENTWNIGVLLLLLLMATAFMGYVLPWGQMSFWGATVITNLMSAIPYMGDSIVTW 164
Cdd:MTH00100 84 ANGASMFFICLFLHVGRGLYYGSYLFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEW 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154760709 165 IWGGPSVNSATLTRFTTLHFLLPFILMAAIITHLIFLHEHGSFNPLGLTSNADKIPFHPYFSTKDAVGAIMATIMLTTLA 244
Cdd:MTH00100 164 IWGGFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLMLLV 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154760709 245 FYFPNLLGDPENFTPADPMKTPDHIKPEWYFLFAYTILRSIPNKLMGVIAMFMSILVLLLMPMLHTSKQQSMSLRPLSQL 324
Cdd:MTH00100 244 LFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAIIPLLHTSKQRSMMFRPLSQC 323
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 154760709 325 LFWTLTADFLILTWIGGQPVQDPYILIGQMASSVYFFTILILLPLAGTIENMLIK 379
Cdd:MTH00100 324 LFWLLVADLLTLTWIGGQPVEHPFIIIGQLASILYFLIILILMPIASLIENNLLK 378
|
|
| CYTB |
MTH00131 |
cytochrome b; Provisional |
5-379 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177189 [Multi-domain] Cd Length: 380 Bit Score: 591.24 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154760709 5 LRKSNPLLKLMNNSLIDLPTPSNISYWWNFGSLLGFTLLIQLASGILLMMHFLADDTMAFMSVAYTSREVWYGWLIRSLH 84
Cdd:MTH00131 4 LRKTHPLLKIANDALVDLPAPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVAHICRDVNYGWLIRNLH 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154760709 85 ANGASLFFLCIFLHMGRGLYYGSYLHENTWNIGVLLLLLLMATAFMGYVLPWGQMSFWGATVITNLMSAIPYMGDSIVTW 164
Cdd:MTH00131 84 ANGASFFFICIYLHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQW 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154760709 165 IWGGPSVNSATLTRFTTLHFLLPFILMAAIITHLIFLHEHGSFNPLGLTSNADKIPFHPYFSTKDAVGAIMATIMLTTLA 244
Cdd:MTH00131 164 IWGGFSVDNATLTRFFAFHFLFPFVIAAATILHLLFLHETGSNNPLGLNSDADKISFHPYFSYKDLLGFAILLLALTSLA 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154760709 245 FYFPNLLGDPENFTPADPMKTPDHIKPEWYFLFAYTILRSIPNKLMGVIAMFMSILVLLLMPMLHTSKQQSMSLRPLSQL 324
Cdd:MTH00131 244 LFSPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPLTQF 323
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 154760709 325 LFWTLTADFLILTWIGGQPVQDPYILIGQMASSVYFFTILILLPLAGTIENMLIK 379
Cdd:MTH00131 324 LFWTLVADVLILTWIGGMPVEHPFIIIGQVASVLYFSLFLVLMPLAGWLENKALE 378
|
|
| CYTB |
MTH00074 |
cytochrome b; Provisional |
1-379 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177145 [Multi-domain] Cd Length: 380 Bit Score: 583.95 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154760709 1 MIHQLRKSNPLLKLMNNSLIDLPTPSNISYWWNFGSLLGFTLLIQLASGILLMMHFLADDTMAFMSVAYTSREVWYGWLI 80
Cdd:MTH00074 1 MAHPIRKTHPLLKIINNSFIDLPTPSNLSSLWNFGSLLGVCLIAQIITGLFLAMHYTADTSSAFSSVAHICRDVNYGWLM 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154760709 81 RSLHANGASLFFLCIFLHMGRGLYYGSYLHENTWNIGVLLLLLLMATAFMGYVLPWGQMSFWGATVITNLMSAIPYMGDS 160
Cdd:MTH00074 81 RNIHANGASFFFICIYLHIGRGLYYGSYMYKETWNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYMGDT 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154760709 161 IVTWIWGGPSVNSATLTRFTTLHFLLPFILMAAIITHLIFLHEHGSFNPLGLTSNADKIPFHPYFSTKDAVGAIMATIML 240
Cdd:MTH00074 161 LVQWIWGGFSVDKATLTRFFAFHFLLPFLIAGASIIHLLFLHETGSNNPTGLNSNPDKVPFHPYFSYKDLLGFLIMLTAL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154760709 241 TTLAFYFPNLLGDPENFTPADPMKTPDHIKPEWYFLFAYTILRSIPNKLMGVIAMFMSILVLLLMPMLHTSKQQSMSLRP 320
Cdd:MTH00074 241 ALLSLFSPNLLGDPDNFTPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVLALLASILILMLIPMLHTSKQRSLMFRP 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 154760709 321 LSQLLFWTLTADFLILTWIGGQPVQDPYILIGQMASSVYFFTILILLPLAGTIENMLIK 379
Cdd:MTH00074 321 LTQILFWLLVANTLILTWIGGQPVEDPFIEIGQAASILYFLLFIIIIPLTGWLENKLLK 379
|
|
| CYTB |
MTH00191 |
cytochrome b; Provisional |
5-369 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177239 [Multi-domain] Cd Length: 365 Bit Score: 574.94 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154760709 5 LRKSNPLLKLMNNSLIDLPTPSNISYWWNFGSLLGFTLLIQLASGILLMMHFLADDTMAFMSVAYTSREVWYGWLIRSLH 84
Cdd:MTH00191 1 MRKTHPLLKIVNGSLIDLPSPSNISYWWNFGSLLGLCLIIQILTGLFLAMHYTADISLAFSSVVHICRDVNYGWLLRNIH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154760709 85 ANGASLFFLCIFLHMGRGLYYGSYLHENTWNIGVLLLLLLMATAFMGYVLPWGQMSFWGATVITNLMSAIPYMGDSIVTW 164
Cdd:MTH00191 81 ANGASFFFICIYLHIGRGLYYGSYLNKETWNVGVILLILSMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGDDLVQW 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154760709 165 IWGGPSVNSATLTRFTTLHFLLPFILMAAIITHLIFLHEHGSFNPLGLTSNADKIPFHPYFSTKDAVGAIMATIMLTTLA 244
Cdd:MTH00191 161 LWGGFSVDNATLTRFFTFHFLLPFLIAALSLIHLLFLHETGSNNPLGLNSDSDKIPFHPYFSYKDILGFFILLFLLLFLV 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154760709 245 FYFPNLLGDPENFTPADPMKTPDHIKPEWYFLFAYTILRSIPNKLMGVIAMFMSILVLLLMPMLHTSKQQSMSLRPLSQL 324
Cdd:MTH00191 241 LFSPNLLGDPENFIPANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVLALVMSILVLFLLPLLHTSKQRSNTFRPLTQV 320
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 154760709 325 LFWTLTADFLILTWIGGQPVQDPYILIGQMASSVYFFTILILLPL 369
Cdd:MTH00191 321 VFWLWVANFILLTWLGGQPVEDPFILLGQISSFLYFFLFLLLFPL 365
|
|
| CYTB |
MTH00145 |
cytochrome b; Provisional |
1-378 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177203 [Multi-domain] Cd Length: 379 Bit Score: 553.36 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154760709 1 MIHQLRKSNPLLKLMNNSLIDLPTPSNISYWWNFGSLLGFTLLIQLASGILLMMHFLADDTMAFMSVAYTSREVWYGWLI 80
Cdd:MTH00145 1 MLSPLRKSHPVLKVVNGSLYDLPAPVNLSIWWNFGSLLGLCLGIQILTGLFLSMHYTAHVDLAFSSVIHIMRDVNYGWLL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154760709 81 RSLHANGASLFFLCIFLHMGRGLYYGSYLHENTWNIGVLLLLLLMATAFMGYVLPWGQMSFWGATVITNLMSAIPYMGDS 160
Cdd:MTH00145 81 RSLHANGASFFFICIYLHIGRGLYYGSYLMQHTWNIGVTLLLLSMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKM 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154760709 161 IVTWIWGGPSVNSATLTRFTTLHFLLPFILMAAIITHLIFLHEHGSFNPLGLTSNADKIPFHPYFSTKDAVGAIMATIML 240
Cdd:MTH00145 161 LVEWVWGGFSVGNATLKRFFSLHFLLPFVILGLSVLHLLFLHETGSNNPLGLDSDGDKVPFHPYYTIKDLVGFVVLLFLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154760709 241 TTLAFYFPNLLGDPENFTPADPMKTPDHIKPEWYFLFAYTILRSIPNKLMGVIAMFMSILVLLLMPMLHTSKQQSMSLRP 320
Cdd:MTH00145 241 VFLVLFFPNLLGDPENFIPANPMVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIVILFFLPLLHVGKFRSLSFYP 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 154760709 321 LSQLLFWTLTADFLILTWIGGQPVQDPYILIGQMASSVYFFtILILLPLAGTIENMLI 378
Cdd:MTH00145 321 LNQVLFWIFVGNFFILTWIGACPVEEPYETIGQVFTVLYFL-FFLILPLVQKLWDNIL 377
|
|
| CYTB |
MTH00156 |
cytochrome b; Provisional |
12-366 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214440 [Multi-domain] Cd Length: 356 Bit Score: 550.54 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154760709 12 LKLMNNSLIDLPTPSNISYWWNFGSLLGFTLLIQLASGILLMMHFLADDTMAFMSVAYTSREVWYGWLIRSLHANGASLF 91
Cdd:MTH00156 1 LKIINNSLIDLPTPSNISYWWNFGSLLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154760709 92 FLCIFLHMGRGLYYGSYLHENTWNIGVLLLLLLMATAFMGYVLPWGQMSFWGATVITNLMSAIPYMGDSIVTWIWGGPSV 171
Cdd:MTH00156 81 FICIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSV 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154760709 172 NSATLTRFTTLHFLLPFILMAAIITHLIFLHEHGSFNPLGLTSNADKIPFHPYFSTKDAVGAIMATIMLTTLAFYFPNLL 251
Cdd:MTH00156 161 DNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154760709 252 GDPENFTPADPMKTPDHIKPEWYFLFAYTILRSIPNKLMGVIAMFMSILVLLLMPMLHTSKQQSMSLRPLSQLLFWTLTA 331
Cdd:MTH00156 241 GDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILMILPFTNKSKFRGNQFYPINKILFWIFVN 320
|
330 340 350
....*....|....*....|....*....|....*
gi 154760709 332 DFLILTWIGGQPVQDPYILIGQMASSVYFFTILIL 366
Cdd:MTH00156 321 IVILLTWIGARPVEEPYILTGQILTILYFLYFIIN 355
|
|
| CYTB |
MTH00034 |
cytochrome b; Validated |
5-378 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 177109 [Multi-domain] Cd Length: 379 Bit Score: 541.99 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154760709 5 LRKSNPLLKLMNNSLIDLPTPSNISYWWNFGSLLGFTLLIQLASGILLMMHFLADDTMAFMSVAYTSREVWYGWLIRSLH 84
Cdd:MTH00034 4 LRKSHPLFKILNSSLIDLPSPSNLSIWWNFGSLLGLCLIIQIITGIFLAMHYTADISLAFSSVSHICRDVNYGWLLRNIH 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154760709 85 ANGASLFFLCIFLHMGRGLYYGSYLHENTWNIGVLLLLLLMATAFMGYVLPWGQMSFWGATVITNLMSAIPYMGDSIVTW 164
Cdd:MTH00034 84 ANGASLFFICLYFHIGRGLYYGSYVNIETWNIGVILFLLTMLTAFVGYVLPWGQMSFWAATVITNLVSAVPYIGTDIVQW 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154760709 165 IWGGPSVNSATLTRFTTLHFLLPFILMAAIITHLIFLHEHGSFNPLGLTSNADKIPFHPYFSTKDAVGAIMATIMLTTLA 244
Cdd:MTH00034 164 IWGGFSVDNATLTRFFAFHFLFPFIIAALSIIHLLFLHQTGSNNPTGLNSNYDKVPFHTYFTTKDLVGFLILFAALSSLA 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154760709 245 FYFPNLLGDPENFTPADPMKTPDHIKPEWYFLFAYTILRSIPNKLMGVIAMFMSILVLLLMPMLHTSKQQSMSLRPLSQL 324
Cdd:MTH00034 244 LLFPTALNDPENFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVAAILVLFLVPILHTSNNQSSTFRPLSQI 323
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 154760709 325 LFWTLTADFLILTWIGGQPVQDPYILIGQMASSVYFFTILILLPLAGTIENMLI 378
Cdd:MTH00034 324 AFWLLIATFFILTWIGSQPVEYPFILLGQVASVLYFSLFLFFFPLISYLENKLI 377
|
|
| CYTB |
MTH00016 |
cytochrome b; Validated |
1-379 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 177102 [Multi-domain] Cd Length: 378 Bit Score: 512.30 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154760709 1 MIHQLRKSNPLLKLMNNSLIDLPTPSNISYWWNFGSLLGFTLLIQLASGILLMMHFLADDTMAFMSVAYTSREVWYGWLI 80
Cdd:MTH00016 1 MFSPMRKTHPLIKIMNGSLVDLPAPSNLSIWWNFGSLLGLCLVIQILTGLFLSMHYTPHIDLAFSSVAHISRDVNYGWLL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154760709 81 RSLHANGASLFFLCIFLHMGRGLYYGSYLHENTWNIGVLLLLLLMATAFMGYVLPWGQMSFWGATVITNLMSAIPYMGDS 160
Cdd:MTH00016 81 RNLHANGASFFFICLYLHIGRGIYYGSYFLMETWNIGVILLLLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKM 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154760709 161 IVTWIWGGPSVNSATLTRFTTLHFLLPFILMAAIITHLIFLHEHGSFNPLGLTSNADKIPFHPYFSTKDAVGAIMATIML 240
Cdd:MTH00016 161 LVQWLWGGFSVDNATLTRFFALHFLLPFVIAALSMIHLLFLHQTGSNNPLGVNSNSDKVPFHPYYTSKDIVGFIVMLFLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154760709 241 TTLAFYFPNLLGDPENFTPADPMKTPDHIKPEWYFLFAYTILRSIPNKLMGVIAMFMSILVLLLMPMLHTSKQQSMSLRP 320
Cdd:MTH00016 241 LSVVLLWPNILGDPENFIPANPLVTPTHIKPEWYFLWAYAILRSIPNKLGGVVAMFASILILFFLPFIFKQKFRGLSFYP 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 154760709 321 LSQLLFWTLTADFLILTWIGGQPVQDPYILIGQMASSVYFFtILILLPLAGTIENMLIK 379
Cdd:MTH00016 321 LNQILFWLLVSNFLLLTWIGGRPVEPPYEFLGQIFTVFYFF-YFMINPLLMKLWDKLLK 378
|
|
| CYTB |
MTH00053 |
cytochrome b; Provisional |
1-379 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 164624 [Multi-domain] Cd Length: 381 Bit Score: 508.09 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154760709 1 MIHQLRKSNPLLKLMNNSLIDLPTPSNISYWWNFGSLLGFTLLIQLASGILLMMHFLADDTMAFMSVAYTSREVWYGWLI 80
Cdd:MTH00053 1 MTKTIRKENPVISLVNSMFIDLPSPSNISYLWNFGSLLGFCLIIQIITGIFLAMHYCADVNLAFSSVAHITRDVNYGFIL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154760709 81 RSLHANGASLFFLCIFLHMGRGLYYGSYLHENTWNIGVLLLLLLMATAFMGYVLPWGQMSFWGATVITNLMSAIPYMGDS 160
Cdd:MTH00053 81 RYLHANGASMFFLCVYFHIGRGIYYGSYTKIIVWNVGVLIFLLMILTAFIGYVLPWGQMSFWAATVITNLLSAIPYVGDD 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154760709 161 IVTWIWGGPSVNSATLTRFTTLHFLLPFILMAAIITHLIFLHEHGSFNPLGLTSNADKIPFHPYFSTKDAVGAIMATIML 240
Cdd:MTH00053 161 IVRWVWGGFSVSNATLNRFYSLHYLLPFILAGLALVHLIALHEDGSNNPIGVRSDIDKIPFHYYYVLKDLYGAVILLIIL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154760709 241 TTLAFYFPNLLGDPENFTPADPMKTPDHIKPEWYFLFAYTILRSIPNKLMGVIAMFMSILVLLLMPMLHTSKQQSMSLRP 320
Cdd:MTH00053 241 SIIVFLFPYSLGDAENFKQANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVVALVFSILVLFFLPYLHKSRFRGLSFRP 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 154760709 321 LSQLLFWTLTADFLILTWIGGQPVQDPYILIGQMASSVYFFTILILLPLAGTIENMLIK 379
Cdd:MTH00053 321 LSKILFWFLVGDFFLLTWIGGQPVEEPYILIGQIASIFYFAYFLILMPLAGYLENKLLK 379
|
|
| CYTB |
MTH00022 |
cytochrome b; Validated |
4-380 |
9.32e-176 |
|
cytochrome b; Validated
Pssm-ID: 164595 [Multi-domain] Cd Length: 379 Bit Score: 494.22 E-value: 9.32e-176
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154760709 4 QLRKSNPLLKLMNNSLIDLPTPSNISYWWNFGSLLGFTLLIQLASGILLMMHFLADDTMAFMSVAYTSREVWYGWLIRSL 83
Cdd:MTH00022 2 PLRKENPLLSIVNGFLVDLPSPSNISYLWNFGSLLGLCLVIQIITGCFLSMHYCSDVSLAFASVGHIMRDVNYGFLLRYL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154760709 84 HANGASLFFLCIFLHMGRGLYYGSYLHENTWNIGVLLLLLLMATAFMGYVLPWGQMSFWGATVITNLMSAIPYMGDSIVT 163
Cdd:MTH00022 82 HANGASLFFLCLYIHIGRGLYYGGYLKFHVWNVGVVIFLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTDIVQ 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154760709 164 WIWGGPSVNSATLTRFTTLHFLLPFILMAAIITHLIFLHEHGSFNPLGLTSNADKIPFHPYFSTKDAVGAIMATIMLTTL 243
Cdd:MTH00022 162 WVWGGFSVSNATLNRFFSLHFLFPFILAFLVIVHLIYLHVDGSNNPIGLNSSVDKVSFHVYYTSKDWYGIVVLFFLLSFI 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154760709 244 AFYFPNLLGDPENFTPADPMKTPDHIKPEWYFLFAYTILRSIPNKLMGVIAMFMSILVLLLMPMLHTSKQQSMSLRPLSQ 323
Cdd:MTH00022 242 VYFAPNLLGDPENFIQANSLVTPVHIQPEWYFLFAYAILRSIPNKLGGVVAMFFSILILFFLPLLHTSWLRGLTFRPLGR 321
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 154760709 324 LLFWTLTADFLILTWIGGQPVQDPYILIGQMASSVYFFTILILLPLAGTIENMLIKP 380
Cdd:MTH00022 322 MAFWFLIVDFILLTWIGSQVVEEPFILIGQLLSFFYFFYFLVLIPLLGELENQLLFK 378
|
|
| CYTB |
MTH00224 |
cytochrome b; Provisional |
1-379 |
3.92e-161 |
|
cytochrome b; Provisional
Pssm-ID: 164767 [Multi-domain] Cd Length: 379 Bit Score: 457.08 E-value: 3.92e-161
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154760709 1 MIHQLRKSNPLLKLMNNSLIDLPTPSNISYWWNFGSLLGFTLLIQLASGILLMMHFLADDTMAFMSVAYTSREVWYGWLI 80
Cdd:MTH00224 1 MFKPFRTTHPAIKILNGSLIDLPAPNNISIWWNYGSLLGLCLVIQVLTGLFLSMHYAPNIEMAFSSVAHISRDVNYGWLL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154760709 81 RSLHANGASLFFLCIFLHMGRGLYYGSYLHENTWNIGVLLLLLLMATAFMGYVLPWGQMSFWGATVITNLMSAIPYMGDS 160
Cdd:MTH00224 81 RSIHANGASMFFLFIYLHVGRGLYYGSFNLSETWNIGVILFILTMATAFLGYVLPWGQMSFWGATVITNLFSAIPYIGKD 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154760709 161 IVTWIWGGPSVNSATLTRFTTLHFLLPFILMAAIITHLIFLHEHGSFNPLGLTSNADKIPFHPYFSTKDAVGAIMATIML 240
Cdd:MTH00224 161 LVEWIWGGFAVDNATLNRFFSFHFLLPFAIMGATILHIMFLHQTGSNNPIGINADSARIPFHPYYSIKDALGYLIAILLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154760709 241 TTLAFYFPNLLGDPENFTPADPMKTPDHIKPEWYFLFAYTILRSIPNKLMGVIAMFMSILVLLLMPMLHTSKQQSMSLRP 320
Cdd:MTH00224 241 SLMVLFEPNLFTDPENFLMANPLVTPIHIKPEWYFLWMYAILRSIPNKLGGVVALFAAILILFILPLTSVMNKRSLPFYP 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 154760709 321 LSQLLFWTLTADFLILTWIGGQPVQDPYILIGQMASSVYfFTILILLPLAGTIENMLIK 379
Cdd:MTH00224 321 LNQLLFWLLVTSWAILTWIGGRPVEDPFEGIGQVFTILY-FSYFIISPAISKLWDDLLN 378
|
|
| CYTB |
MTH00033 |
cytochrome b; Provisional |
17-377 |
2.27e-130 |
|
cytochrome b; Provisional
Pssm-ID: 133672 [Multi-domain] Cd Length: 383 Bit Score: 379.28 E-value: 2.27e-130
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154760709 17 NSLIDLPTPSNISYWWNFGSLLGFTLLIQLASGILLMMHFLADDTMAFMSVAYTSREVWYGWLIRSLHANGASLFFLCIF 96
Cdd:MTH00033 13 NDIIDLPTPSNISYWWNFGSLLCLCLGIQILTGVLLAMHYRSDVSLAFSSVAHIVRDVNYGWILRYVHANGASLFFICVY 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154760709 97 LHMGRGLYYGSYLHENTWNIGVLLLLLLMATAFMGYVLPWGQMSFWGATVITNLMSAIPYMGDSIVTWIWGGPSVNSATL 176
Cdd:MTH00033 93 CHIGRGLYYGGYSRVLTWIVGVLIFFIMMLTAFIGYVLPWGQMSFWAATVITNLVSAIPSVGGSIVEWIWGGFSVSNCTL 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154760709 177 TRFTTLHFLLPFILMAAIITHLIFLHEHGSFNPLGLTSNADKIPFHPYFSTKDAVGAIMATIMLTTLAF--YFPNLLGDP 254
Cdd:MTH00033 173 NRFFSLHYLLPFVLVGLVLAHLLTLHEKGSNEPLGLVGLSDRTAFHVYFTIKDILGFLILFGVFVIIGIepRIETLLQDP 252
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154760709 255 ENFTPADPMKTPDHIKPEWYFLFAYTILRSIPNKLMGVIAMFMSILVLLLMPMLHTSKQQSMSLRPLSQLLFWTLTADFL 334
Cdd:MTH00033 253 ENFIQANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVLALFASILVLLLMPILDRSKIRSLTFNPTGKFFFWFIVGDFI 332
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 154760709 335 ILTWIGGQPV-QDPYILIGQMASSVYFFTILILLPLAGTIENML 377
Cdd:MTH00033 333 ILTWIGSAPAgADPYVLIGRIATIFYFGYFLVLVPLLGYLSNLF 376
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
15-382 |
6.15e-127 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 370.66 E-value: 6.15e-127
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154760709 15 MNNSLIDLPTPSNISYWWNFGSLLGFTLLIQLASGILLMMHFLADDTMAFMSVAYTSREVWYGWLIRSLHANGASLFFLC 94
Cdd:COG1290 23 LVREHLEYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAA 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154760709 95 IFLHMGRGLYYGSYL--HENTWNIGVLLLLLLMATAFMGYVLPWGQMSFWGATVITNLMSAIPYMGDSIVTWIWGGPSVN 172
Cdd:COG1290 103 VYLHMFRGFFYGAYKkpRELNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFPG 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154760709 173 SATLTRFTTLH-FLLPFILMAAIITHLIFLHEHGSFNPLG----LTSNADKIPFHPYFSTKDAVGAIMATIMLTTLAFYF 247
Cdd:COG1290 183 DATLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGperkKTEKVDGVPFHPYYTVKDGFGFFVFLGVFALLAFFF 262
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154760709 248 PNllGDPENFTPADPMKTPDHIKPEWYFLFAYTILRSIP--NKLMGVIAMFMSILVLLLMPMLHTSKQQSMSLRPLSQLL 325
Cdd:COG1290 263 PI--NPPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRPVRTAL 340
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 154760709 326 FWTLTADFLILTWIGGQPvqDPYILIGQMASSVYFFTILILLPLAGTIENMliKPLQ 382
Cdd:COG1290 341 GVAFIVFFIVLTILGANP--PIATLLGSINTVTYFAFFLIVLPILAFIEKT--KPLP 393
|
|
| CYTB |
MTH00086 |
cytochrome b; Provisional |
15-367 |
8.77e-117 |
|
cytochrome b; Provisional
Pssm-ID: 177151 [Multi-domain] Cd Length: 355 Bit Score: 343.46 E-value: 8.77e-117
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154760709 15 MNNSLIDLPTPSNISYWWNFGSLLGFTLLIQLASGILLMMHFLADDTMAFMSVAYTSREVWYGWLIRSLHANGASLFFLC 94
Cdd:MTH00086 3 VNSLVVTLPSSKSLSYWWNFGSMLGMVLVFQILTGTFLAFYYTADSSMAFSSVQYIMYEVNFGWLFRIFHFNGASLFFIF 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154760709 95 IFLHMGRGLYYGSYLHENTWNIGVLLLLLLMATAFMGYVLPWGQMSFWGATVITNLMSAIPYMGDSIVTWIWGGPSVNSA 174
Cdd:MTH00086 83 LYLHIFKGLFMMSYRLKKVWISGLTIYLLVMMEAFMGYVLVWAQMSFWAAVVITSLLSVIPIWGPSIVMWIWGGFGVSSA 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154760709 175 TLTRFTTLHFLLPFILMAAIITHLIFLHEHGSFNPLGLTSNADKIPFHPYFSTKDAVGAIMaTIMLTTLAFYFPNLLGDP 254
Cdd:MTH00086 163 TLKFFFVLHFLLPWGLLVLVLFHLIFLHSTGSTSSLYCHGDYDKICFGPEYWNKDAYNIIF-WLVFIIFSLFYPFNLGDP 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154760709 255 ENFTPADPMKTPDHIKPEWYFLFAYTILRSIPNKLMGVIAMFMSILVLLLMPMLHTSkqqSMSLRPLSQLLFWTLTADFL 334
Cdd:MTH00086 242 EMFIEADPMMSPVHIVPEWYFLFAYAILRAIPNKVLGVIALLMSIVVFYFFIFVNNY---TSCLNKLNKFLVFSFIVVNV 318
|
330 340 350
....*....|....*....|....*....|...
gi 154760709 335 ILTWIGGQPVQDPYILIGQMASSVYFFTILILL 367
Cdd:MTH00086 319 ILSWLGQCLVEYPFLFLSQIFSFIYFFLILLML 351
|
|
| CYTB |
MTH00046 |
cytochrome b; Validated |
11-365 |
4.15e-85 |
|
cytochrome b; Validated
Pssm-ID: 177121 [Multi-domain] Cd Length: 355 Bit Score: 262.61 E-value: 4.15e-85
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154760709 11 LLKLMNNSLIDLPTPSNISYWWNFGSLLGFTLLIQLASGILLMMHFLADDTMAFMSVAYTSREVWYGWLIRSLHANGASL 90
Cdd:MTH00046 1 MISLIRRNLIDLPTNYSLNYYWCSGFVLSVFMVIQVLTGVLLSLLYVADSLCSFFCVMSLSNDSFFTWCVRYWHIWGVNV 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154760709 91 FFLCIFLHMGRGLYYGSYLHENTWNIGVLLLLLLMATAFMGYVLPWGQMSFWGATVITNLMSAIPYMGDSIVTWIWGGPS 170
Cdd:MTH00046 81 LFILLFIHMGRALYYSSYSKKGVWNVGFILYLLVMVEAFLGYILPWHQMSYWAATVLTSIVDSVPIVGSLVYKYIVGGFS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154760709 171 VNSATLTRFTTLHFLLPFILMAAIITHLIFLHEHGSFNPLGLTSN-ADKIPFHPYFSTKDAVGAIMATIMLTTLAFYFPN 249
Cdd:MTH00046 161 VTGVTLVRVFSVHICLGFVILGLMVVHLFYLHKSGSSNPLFSSNGySDVVYFHSYFTVKDLFLFMVVCSLLVFWLFVSPD 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154760709 250 LLGDPENFTPADPMKTPDHIKPEWYFLFAYTILRSIPNKLMGVIaMFMSILVLLLMPMLHTSKQQSMSlrplSQLLFWTL 329
Cdd:MTH00046 241 LVLDIEAYLEADPLVTPVSIKPEWYFLAFYAMLRSINSKIGGLV-LVLSFLFFLWVPTFNGSSVYSVW----RQVNFWLI 315
|
330 340 350
....*....|....*....|....*....|....*.
gi 154760709 330 TADFLILTWIGGQPVQDPYILIGQMASSVYFFTILI 365
Cdd:MTH00046 316 VSLFFSLSYLGGCHPEYPYLLISQLFSVLMVLLLFI 351
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
10-206 |
2.28e-82 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 249.98 E-value: 2.28e-82
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154760709 10 PLLKLMNNSLIDLPTPSNISYWWNFGSLLGFTLLIQLASGILLMMHFLADDTMAFMSVAYTSREVWYGWLIRSLHANGAS 89
Cdd:cd00284 1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154760709 90 LFFLCIFLHMGRGLYYGSY--LHENTWNIGVLLLLLLMATAFMGYVLPWGQMSFWGATVITNLMSAIPYMGDSIVTWIWG 167
Cdd:cd00284 81 MFFLMLYLHIFRGLYYGSYkkPRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160
|
170 180 190
....*....|....*....|....*....|....*....
gi 154760709 168 GPSVNSATLTRFTTLHFLLPFILMAAIITHLIFLHEHGS 206
Cdd:cd00284 161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGS 199
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
19-205 |
5.00e-73 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 225.72 E-value: 5.00e-73
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154760709 19 LIDLPTPSNISYWWNFGSLLGFTLLIQLASGILLMMHFLADDTMAFMSVAYTSREVWYGWLIRSLHANGASLFFLCIFLH 98
Cdd:pfam00033 1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154760709 99 MGRGLYYG--SYLHENTWNIGVLLLLLLMATAFMGYVLPWGQMSFWGATVITNLMSAIPYMGDSIVTWIWGGPSVNSATL 176
Cdd:pfam00033 81 IFRGLYYGgfSYPRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160
|
170 180
....*....|....*....|....*....
gi 154760709 177 TRFTTLHFLLPFILMAAIITHLIFLHEHG 205
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
| cytochrome_b_C |
cd00290 |
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
208-355 |
8.30e-55 |
|
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal domain is involved in forming the ubiquinol/ubiquinone binding sites, but not the heme binding sites. The N-terminal portion of cytochrome b, which contains both heme binding sites, is described in a separate CD.
Pssm-ID: 238179 [Multi-domain] Cd Length: 147 Bit Score: 177.45 E-value: 8.30e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154760709 208 NPLGLTSNADKIPFHPYFSTKDAVGAIMATIMLTTLAFYFPNLLGDPENFTPADPMKTPDHIKPEWYFLFAYTILRSIPN 287
Cdd:cd00290 1 NPLGLASDMDKISFHPYFWPKDLLGAFPILIIFMILVFYAPNLLGHPDNGIPANPLATPLHILPEWYFLPVYAILRAIPN 80
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 154760709 288 KLMGVIAMFMSILVLLLMPMLHTSKQQSMSlRPLSQLLFWTLTADFLILTWIGGQPVQDPYILIGQMA 355
Cdd:cd00290 81 KLLGVLAMAASILSLFLVPFLENSNKRSQF-RPLRPTAFWVFLAGTLVLGWLGIQPVEYPFSLILQLF 147
|
|
| Cytochrom_B_C |
pfam00032 |
Cytochrome b(C-terminal)/b6/petD; |
259-359 |
5.36e-46 |
|
Cytochrome b(C-terminal)/b6/petD;
Pssm-ID: 459640 [Multi-domain] Cd Length: 101 Bit Score: 153.02 E-value: 5.36e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154760709 259 PADPMKTPDHIKPEWYFLFAYTILRSIPNKLMGVIAMFMSILVLLLMPMLHTSKQQSMSLRPLSQLLFWTLTADFLILTW 338
Cdd:pfam00032 1 PANPLVTPAHIVPEWYFLPFYAILRSIPSKLGGVIAMGAAILILFLLPWLDRSPVRSIRYRPLFKIFFWLFVVDFVVLGW 80
|
90 100
....*....|....*....|.
gi 154760709 339 IGGQPVQDPYILIGQMASSVY 359
Cdd:pfam00032 81 LGKQPPTGPYTLLGQIATVYY 101
|
|
| Cytochrom_B_N_2 |
pfam13631 |
Cytochrome b(N-terminal)/b6/petB; |
89-254 |
8.17e-43 |
|
Cytochrome b(N-terminal)/b6/petB;
Pssm-ID: 433364 Cd Length: 169 Bit Score: 147.00 E-value: 8.17e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154760709 89 SLFFLCIFLHMGRGLYYGSYL--HENTWNIGVLLLLLLMATAFMGYVLPWGQMSFWGATVITNLMSAIPYMGDSIVTWIW 166
Cdd:pfam13631 1 YIFIAAIYVHMLRIFFTGAYRkpRELNWIIGVLLLLLTLGEGFTGYSLPDDLLSGTGLRIGLGILSSIPVVGTWLVWLLF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154760709 167 GGPSVNSATLTRFTTLHF-LLPFILMAAIITHLIFLHEHGSFNPLGLTSNADKIPFHPYFSTKDAVGAIMATIMLTTLAF 245
Cdd:pfam13631 81 GGPFPGTATIPRFYALHIlLLPGLILALIVAHLLLVEKHGQFPPPGTEKNVVGVPFWPVFAVKMLLFFLITVALLIGLAQ 160
|
....*....
gi 154760709 246 YFPNLLGDP 254
Cdd:pfam13631 161 INPIWLGGP 169
|
|
| PRK03735 |
PRK03735 |
cytochrome b6; Provisional |
34-210 |
1.51e-35 |
|
cytochrome b6; Provisional
Pssm-ID: 179639 Cd Length: 223 Bit Score: 129.83 E-value: 1.51e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154760709 34 FGSLLGFTLLIQLASGILLMMHFLADDTMAFMSVAYTSREVWYGWLIRSLHANGASLFFLCIFLHMGRGLYYGSYL--HE 111
Cdd:PRK03735 44 FGGLTFFCFVIQILSGMFLTMYYVPDIKNAYESVYYLQNEVAFGWIVRGMHHWGASLVIVMMFLHTLRVFFTGGYKkpRE 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154760709 112 NTWNIGVLLLLLLMATAFMGYVLPWGQMSFWGATVITNLMSAIPYMGDSIVTWIWGGPSVNSATLTRFTTLH-FLLPFIL 190
Cdd:PRK03735 124 LNWVVGVLIFFVTVGLGFTGYLLPWDQKAYFATKVGSQIAEAIPVIGDFIKTLLRGGEIVGAQTLTRFFAIHvFFLPWAL 203
|
170 180
....*....|....*....|
gi 154760709 191 MAAIITHLIFLHEHGSFNPL 210
Cdd:PRK03735 204 AVLMLAHFLMIRKQGISGPL 223
|
|
| petB |
CHL00070 |
cytochrome b6 |
25-210 |
9.35e-29 |
|
cytochrome b6
Pssm-ID: 177009 Cd Length: 215 Bit Score: 111.35 E-value: 9.35e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154760709 25 PSNISYWWNFGSLLGFTLLIQLASGILLMMHFLADDTMAFMSVAYTSREVWYGWLIRSLHANGASLFFLCIFLHMGRGLY 104
Cdd:CHL00070 27 PPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMMILHVFRVYL 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154760709 105 YGSYL--HENTWNIGVLLLLLLMATAFMGYVLPWGQMSFWGATVITNLMSAIPYMGDSIVTWIWGGPSVNSATLTRFTTL 182
Cdd:CHL00070 107 TGGFKkpRELTWVTGVVLAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSVSVGQSTLTRFYSL 186
|
170 180
....*....|....*....|....*....
gi 154760709 183 H-FLLPFILMAAIITHLIFLHEHGSFNPL 210
Cdd:CHL00070 187 HtFVLPLLTAVFMLMHFLMIRKQGISGPL 215
|
|
| PetD |
COG5679 |
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion]; ... |
234-340 |
1.22e-12 |
|
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion];
Pssm-ID: 444393 [Multi-domain] Cd Length: 161 Bit Score: 65.20 E-value: 1.22e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154760709 234 IMATIMLTT-LAFYFPNLLGDPenftpADPMKTPDHIKPEWYFLFAYTILRSIPNKLMGVIAMFMSILVLLLMPMLHT-S 311
Cdd:COG5679 45 ILGTIALCIgLAVLDPAMMGEP-----ADPFATPLEILPEWYLYPVFQILRVVPNKLLGIVMMAAIPLGLMLVPFIENvN 119
|
90 100
....*....|....*....|....*....
gi 154760709 312 KQQSMSLRPLSQLLFWTLTadfLILTWIG 340
Cdd:COG5679 120 KFQNPFRRPVATAVFLFGT---LVTLWLG 145
|
|
| petD |
CHL00058 |
cytochrome b6/f complex subunit IV |
234-326 |
3.80e-12 |
|
cytochrome b6/f complex subunit IV
Pssm-ID: 176998 Cd Length: 160 Bit Score: 63.87 E-value: 3.80e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154760709 234 IMATIMLTT-LAFYFPNLLGDPenftpADPMKTPDHIKPEWYFLFAYTILRSIPNKLMGVIAMFMSILVLLLMPML-HTS 311
Cdd:CHL00058 44 ILGTIACNVgLAVLEPSMIGEP-----ADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMASVPAGLLTVPFLeNVN 118
|
90
....*....|....*
gi 154760709 312 KQQSMSLRPLSQLLF 326
Cdd:CHL00058 119 KFQNPFRRPVATTVF 133
|
|
| cytb6/f_IV |
TIGR01156 |
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ... |
234-340 |
1.03e-10 |
|
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]
Pssm-ID: 130224 [Multi-domain] Cd Length: 159 Bit Score: 59.81 E-value: 1.03e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154760709 234 IMATI-MLTTLAFYFPNLLGDPenftpADPMKTPDHIKPEWYFLFAYTILRSIPNKLMGVIAMFMSILVLLLMPMLHT-S 311
Cdd:TIGR01156 44 ILGTIaCVVGLAVLDPAMIGEP-----ANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIENvN 118
|
90 100
....*....|....*....|....*....
gi 154760709 312 KQQSMSLRPLSQLLFWTLTadfLILTWIG 340
Cdd:TIGR01156 119 KFQNPFRRPVATTVFLFGT---VVALWLG 144
|
|
| |
