|
Name |
Accession |
Description |
Interval |
E-value |
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
4-589 |
0e+00 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 836.74 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 4 TSMLTMTLFMLPLFILALPTLTPTS--KLIPHPSTNVLAAKLAFFTSLFPLAHFIHTGMTTTTCETQLLTMGTTTIQVTL 81
Cdd:MTH00004 1 MTLLLNTTTLLTLLILLTPILLPLLskNLKNSPTTIKTTVKLAFLISLIPLTLFLNSGTESITTNWPWIFTTTFNIPISF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 82 TLDSYSTFFMPILLFVVWSIMDFTVQYMKPDLKVSIFFSYLITFTMMMMILVTAENMFQFFIGWEGVGIMSFMLINWWSF 161
Cdd:MTH00004 81 KLDQYSLMFLPIALFVTWSILEFSTWYMASDPHITKFFKYLLIFLIAMLILITANNMFQLFIGWEGVGIMSFLLIGWWSG 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 162 RSSSNKAAMQAVVYNRLADIGLIITMAWMVINNTSLSIKGVQAPPDLALIPALGLVLAAAGKSAQFGFHPWLPAAMEGPT 241
Cdd:MTH00004 161 RAEANTAALQAIIYNRIGDIGLILSMAWLAMTLNTWEIQQLFSPTQTPTLPLLGLILAATGKSAQFGLHPWLPAAMEGPT 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 242 PVSALLHSSTMVVAGVFLLIRTSDLLYSSETATTICLFLGAITSLLAATCALAQNDLKKIIAYSTTSQLGLMMISIGLKQ 321
Cdd:MTH00004 241 PVSALLHSSTMVVAGIFLLIRTHPLLQNNQTALTICLCLGALTTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQ 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 322 PELAFMHISTHAFFKAMLFLCAGTIIHNLDNEQDIRKMGGLKKALPITSSCLVIGSLALSGMPFMAGFYSKDAIIESINT 401
Cdd:MTH00004 321 PQLAFLHISTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLQKTLPITSSCLTIGNLALMGTPFLSGFYSKDTIIETLNT 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 402 SNVNSLSLAMTLMATILTTFYSLRMIYYVALNTPRILPLSSISEN-PQTTNPILRLAVGSIAAGLLISSTILPTNIPQLT 480
Cdd:MTH00004 401 SYLNAWALLLTLLATSFTAAYSLRMILLVQTGFPRTPPTTPINENtPTIINPITRLALGSILAGLLISSTILPTKTPPMT 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 481 MPASAKLAALGILMLGLLVGSALVMMANQLPTSIKGSQTPLLFKIMHFYFILHHTLPTAILQISQKLLTHLMDQTHYEAL 560
Cdd:MTH00004 481 MPTTTKLAALIVTILGILLALELSNMTTTLTPPKQNTLHNFSNQLAFFNPLTHRLLPMTLLKSSQKIATHLIDLSWLEKM 560
|
570 580
....*....|....*....|....*....
gi 187250407 561 GPKAATYLQMLMSKILTNFHKARINPYLK 589
Cdd:MTH00004 561 GPKGLANLQLTASKTLTTLQKGLIKNYLT 589
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
1-588 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 690.03 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 1 MAQTSMLTMTLFMLPLfilaLPTLTPTSKLIPHPSTNVLAA-KLAFFTSLFPLAHFIHTGMTTTTCETQLLTMGTTTIQV 79
Cdd:MTH00137 7 MTSSLILIFALLIYPL----LTTLSPNPQKPNWALTHVKTAvKTAFFVSLLPLFLFLNQGAETIITNWNWMNTLTFDINI 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 80 TLTLDSYSTFFMPILLFVVWSIMDFTVQYMKPDLKVSIFFSYLITFTMMMMILVTAENMFQFFIGWEGVGIMSFMLINWW 159
Cdd:MTH00137 83 SFKFDHYSIIFTPIALYVTWSILEFASWYMHADPNMNRFFKYLLIFLIAMIILVTANNMFQLFIGWEGVGIMSFLLIGWW 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 160 SFRSSSNKAAMQAVVYNRLADIGLIITMAWMVINNTSLSIKGV-QAPPDLAL-IPALGLVLAAAGKSAQFGFHPWLPAAM 237
Cdd:MTH00137 163 YGRADANTAALQAVIYNRVGDIGLILAMAWMATNLNSWEIQQIfALSKDFDLtLPLLGLILAATGKSAQFGLHPWLPSAM 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 238 EGPTPVSALLHSSTMVVAGVFLLIRTSDLLYSSETATTICLFLGAITSLLAATCALAQNDLKKIIAYSTTSQLGLMMISI 317
Cdd:MTH00137 243 EGPTPVSALLHSSTMVVAGIFLLIRLSPLMENNQTALTTCLCLGALTTLFTATCALTQNDIKKIVAFSTSSQLGLMMVTI 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 318 GLKQPELAFMHISTHAFFKAMLFLCAGTIIHNLDNEQDIRKMGGLKKALPITSSCLVIGSLALSGMPFMAGFYSKDAIIE 397
Cdd:MTH00137 323 GLNQPQLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLHHLTPFTSSCLTIGSLALTGTPFLAGFFSKDAIIE 402
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 398 SINTSNVNSLSLAMTLMATILTTFYSLRMIYYVALNTPRILPLSSISEN-PQTTNPILRLAVGSIAAGLLISSTILPTNI 476
Cdd:MTH00137 403 ALNTSHLNAWALTLTLIATSFTAVYSLRVVFFVSMGHPRFNPLSPINENnPAVINPIKRLAWGSIIAGLLITSNILPLKT 482
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 477 PQLTMPASAKLAALGILMLGLLVGSALVMMANQlPTSIKGSQTPLLFKIMHFYF--ILHHTLPTAILQISQKLLTHLMDQ 554
Cdd:MTH00137 483 PVMTMPPLLKLAALIVTILGLLIALELASLTNK-QFKPTPTLPPHHFSNMLGFFpaIIHRLTPKLNLTLGQTIATQMVDQ 561
|
570 580 590
....*....|....*....|....*....|....
gi 187250407 555 THYEALGPKAATYLQMLMSKILTNFHKARINPYL 588
Cdd:MTH00137 562 TWLEKTGPKGIASLQLPLITTTSNIQQGMIKTYL 595
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
4-588 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 673.54 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 4 TSMLTMTLFMLPLFILALPTLTPTSKLIPHPSTNvlAAKLAFFTSLFPLAHFIHTGMTTTTCETQLLTMGTTTIQVTLTL 83
Cdd:MTH00066 3 LMLIFNSSMILSLLLLILPLLLPKSNNFHTNVKT--SVKTAFFISLIPLMIFINQGLESITTSFHWMNIFNFNINSSFKF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 84 DSYSTFFMPILLFVVWSIMDFTVQYMKPDLKVSIFFSYLITFTMMMMILVTAENMFQFFIGWEGVGIMSFMLINWWSFRS 163
Cdd:MTH00066 81 DQYSIIFLPIALFVTWSILEFAIWYMHSDPKINRFFKYLLIFLIAMMILVTANNLFQLFIGWEGVGIMSFLLIGWWHARA 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 164 SSNKAAMQAVVYNRLADIGLIITMAWMVINNTSLSIKGVQAPPDLALIPALGLVLAAAGKSAQFGFHPWLPAAMEGPTPV 243
Cdd:MTH00066 161 DANTAALQAVLYNRVGDIGLILSMAWLAMNTNSWELQQIFLLNDNSTLPLLGLILAAAGKSAQFGLHPWLPAAMEGPTPV 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 244 SALLHSSTMVVAGVFLLIRTSDLLYSSETATTICLFLGAITSLLAATCALAQNDLKKIIAYSTTSQLGLMMISIGLKQPE 323
Cdd:MTH00066 241 SALLHSSTMVVAGIFLLIRFHPLLENNQTALTICLCLGALTTLFTAACALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQ 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 324 LAFMHISTHAFFKAMLFLCAGTIIHNLDNEQDIRKMGGLKKALPITSSCLVIGSLALSGMPFMAGFYSKDAIIESINTSN 403
Cdd:MTH00066 321 LAFFHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLQKALPITTSCLTIGSLALTGTPFLAGFFSKDAIIEAMNTSN 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 404 VNSLSLAMTLMATILTTFYSLRMIYYVALNTPRILPLSSISEN-PQTTNPILRLAVGSIAAGLLISSTILPTNIPQLTMP 482
Cdd:MTH00066 401 LNSWALILTLIATSFTAVYSFRIIYFSSMKFPRSLPLSPINENnPLIINPIKRLAWGSIIAGLLIIFNILPMKPQILTMP 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 483 ASAKLAALGILMLGLLVGSALV-MMANQLPTSIKGSQTPLLfkiMHFYFILHHTLPTAILQISQKLLTHLMDQTHYEALG 561
Cdd:MTH00066 481 TFMKLAALLVTLLGLLIALDLAkITSKTTPKTKMHSFSNLL---AFFPTIIHRLSPKTNLNSGQNIATHLTDMTWYEKSG 557
|
570 580
....*....|....*....|....*..
gi 187250407 562 PKAATYLQMLMSKILTNFHKARINPYL 588
Cdd:MTH00066 558 PKGLTNQQLPPIKTITNIQTGLIKTYL 584
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
4-578 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 664.24 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 4 TSMLTMTLFMLPLFILAlpTLTPTSKLIPHPSTNVLAAKLAFFTSLFPLAHFIHTGMTTTTCETQLLTMGTTTIQVTLTL 83
Cdd:MTH00108 5 TSSTLLTLLILTLPIIM--TLTNPYKTNNYPLYVKTTISYAFIISLIPTMMFIHSGQEMIISNWHWMTIQTLKLSLSFKL 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 84 DSYSTFFMPILLFVVWSIMDFTVQYMKPDLKVSIFFSYLITFTMMMMILVTAENMFQFFIGWEGVGIMSFMLINWWSFRS 163
Cdd:MTH00108 83 DYFSMIFIPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRT 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 164 SSNKAAMQAVVYNRLADIGLIITMAWMVINNTSLSIKGV-QAPPDLALIPALGLVLAAAGKSAQFGFHPWLPAAMEGPTP 242
Cdd:MTH00108 163 DANTAALQAILYNRIGDIGFILAMAWFLLNLNSWDLQQIfMLNPNNSNLPLMGLLLAATGKSAQFGLHPWLPSAMEGPTP 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 243 VSALLHSSTMVVAGVFLLIRTSDLLYSSETATTICLFLGAITSLLAATCALAQNDLKKIIAYSTTSQLGLMMISIGLKQP 322
Cdd:MTH00108 243 VSALLHSSTMVVAGVFLLIRFHPLMENNKTIQTLTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQP 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 323 ELAFMHISTHAFFKAMLFLCAGTIIHNLDNEQDIRKMGGLKKALPITSSCLVIGSLALSGMPFMAGFYSKDAIIESINTS 402
Cdd:MTH00108 323 HLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKTLPFTSTALIIGSLALTGMPFLTGFYSKDLIIEAANTS 402
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 403 NVNSLSLAMTLMATILTTFYSLRMIYYVALNTPRILPLSSISEN-PQTTNPILRLAVGSIAAGLLISSTILPTNIPQLTM 481
Cdd:MTH00108 403 YTNAWALLITLIATSLTAAYSTRIIFFALLGQPRFPPLITINENnPLLINPIKRLLLGSIFAGFLISNNIPPTTIPQMTM 482
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 482 PASAKLAALGILMLGLLVGSALVMMANQLPTsiKGSQTPLLFKIMHFYF--ILHHTLPTAILQISQKLLTHLMDQTHYEA 559
Cdd:MTH00108 483 PLYLKLTALAVTILGFILALELNLLTNNLKF--KYPSNTFKFSNMLGYFptIMHRLPPYMNLTMSQKLASMLLDLIWLEK 560
|
570
....*....|....*....
gi 187250407 560 LGPKAATYLQMLMSKILTN 578
Cdd:MTH00108 561 ILPKTISLIQMKASTTISN 579
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
9-588 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 588.46 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 9 MTLFMLPLFILALPTLTPTSKLIPHpstNVLAAKLAFFTSLFPLAHFIHTGMTTTTCETQLLTMGTTTIQVTLTLDSYST 88
Cdd:MTH00211 6 NSGFLLILILLLLPLLLPLNNSKLH---IKKAVKLSFFISLIPLLIFLDQGLETILTNWSWINLGLFSLNLSFKFDFYSI 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 89 FFMPILLFVVWSIMDFTVQYMKPDLKVSIFFSYLITFTMMMMILVTAENMFQFFIGWEGVGIMSFMLINWWSFRSSSNKA 168
Cdd:MTH00211 83 FFTSVALYVTWSILEFSLWYMSSEPNINRFFKYLLLFLIFMLILVSANNLFQLFIGWEGVGIMSFLLISWWYGRSDANTA 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 169 AMQAVVYNRLADIGLIITMAWMVINNTSLSIKGVQAPPDLALIPALGLVLAAAGKSAQFGFHPWLPAAMEGPTPVSALLH 248
Cdd:MTH00211 163 ALQAVIYNRIGDIGLLLSMVWLLLNLNSWEISQLFILNLDLTLFLLGLLLAAMGKSAQFGFHPWLPSAMEGPTPVSALLH 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 249 SSTMVVAGVFLLIRTSDLLYSSETATTICLFLGAITSLLAATCALAQNDLKKIIAYSTTSQLGLMMISIGLKQPELAFMH 328
Cdd:MTH00211 243 SSTMVVAGVFLLIRLSPLFQNNQLILGAVLLLGALTMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTLGLNQPQLAFLH 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 329 ISTHAFFKAMLFLCAGTIIHNLDNEQDIRKMGGLKKALPITSSCLVIGSLALSGMPFMAGFYSKDAIIESINTSNVNSLS 408
Cdd:MTH00211 323 ICTHAFFKAMLFMCSGSIIHGLNNEQDIRKMGGLSKNLPFTSSCLFLGSLALMGFPFLSGFFSKDLILESMNGSYLNAWA 402
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 409 LAMTLMATILTTFYSLRMIYYVALNTPRILPLSSISEN-PQTTNPILRLAVGSIAAGLLISSTILPTNIPQLTMPASAKL 487
Cdd:MTH00211 403 LLLTLLATSLTAAYSFRLIFLSLGGYPRFLSLSPINENyKLLKNPLKRLALGSILAGFIITSNLPPEKPEILSLPFLLKL 482
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 488 AALGILMLGLLVGSalvMMANQLPTSIKGSQTPLLFKIMHFYFILHHTLPTAILQISQKLLTHLMDQTHYEALGPKAATY 567
Cdd:MTH00211 483 MPLLVTIVGLLLGL---ELVNLTHKQLKTSTLSFSNMLGYYPPIIHRLLPKLSLKWGQTLSTHLMDLGWYEKLGPKGLGV 559
|
570 580
....*....|....*....|.
gi 187250407 568 LQMLMSKILTNFHKARINPYL 588
Cdd:MTH00211 560 NQKKLIKLVTSPQQGLIKSYL 580
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
70-589 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 532.62 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 70 LTMGTTTIQVTLTLDSYSTFFMPILLFVVWSIMDFTVQYMKPDLKVSIFFSYLITFTMMMMILVTAENMFQFFIGWEGVG 149
Cdd:MTH00208 92 LSNTLFNFSLSFIFDFYFILFFSVALFVTWSIIEFSHYYMSNDPNKNAFFRLLIIFLLNMLILTSSNNLFLLFIGWEGVG 171
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 150 IMSFMLINWWSFRSSSNKAAMQAVVYNRLADIGLIITMAWMVINNTSLSIKGV----QAPPDLALIPALGLVLAAAGKSA 225
Cdd:MTH00208 172 FLSFLLISWWTTRNDANSSALQAVIYNRIGDIGIILFLSLSLINFNSWNLNEIlslnNSNSFLINILLFGILLAAAGKSA 251
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 226 QFGFHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIRTSDLLYSSETATTICLFLGAITSLLAATCALAQNDLKKIIAYS 305
Cdd:MTH00208 252 QFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIRTSPLISNSPWFLSLCLILGSLTALFAASTAISQHDIKKIIAYS 331
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 306 TTSQLGLMMISIGLKQPELAFMHISTHAFFKAMLFLCAGTIIHNLDNEQDIRKMGGLKKALPITSSCLVIGSLALSGMPF 385
Cdd:MTH00208 332 TTSQLGLMVVAIGLNQPNLALFHICTHAFFKAMLFLCSGSIIHSLNNEQDLRKMGGLSFLLPVTSSCIILGSLALMGTPF 411
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 386 MAGFYSKDAIIESINTSNVNSLSLAMTLMATILTTFYSLRMIYYVALNTPRILPLSSIS-ENPQTTNPILRLAVGSIAAG 464
Cdd:MTH00208 412 LAGFYSKDLILEAGLASISNLLSIILALIATLLTAVYSFRIIFFCFLNNPSFSPLSPISeENPNLTNPLLRLAIGTIISG 491
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 465 LLISSTILptNIPQLTMPASAKLAALGILMLGLLVGSALVMMANQLPTSikGSQTPLLFKIMHFYFILHHTLPTAILQIS 544
Cdd:MTH00208 492 WFFSNFVF--NLPPLTLPLILKSLPLIVTIIGAAFSFSFLLSLSSNPIN--SNFFSFLSNQWFFVNISHSIIISFSFFTS 567
|
490 500 510 520
....*....|....*....|....*....|....*....|....*
gi 187250407 545 QKLLTHLMDQTHYEALGPKAATYLQMLMSKILTNFHKARINPYLK 589
Cdd:MTH00208 568 LFGSTRTLDRGWSENIGPQGIGNTSSTLSKSYQLTQTGYIKQYLL 612
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
37-503 |
9.56e-128 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 388.74 E-value: 9.56e-128
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 37 NVLAAKLAFFTSLFPLAHFIHTGMTTTTCetQLLTMGTTTIQVTLTLDSYSTFFMPILLFVVWSIMDFTVQYMKPDLKVS 116
Cdd:COG1009 34 AALAPLAAFVLSLLLFPAVLGGEVVVELY--TWIPVGSLGLDFGFRLDGLSLLMLLLVTGVGLLVHIYSIGYMSGDPGLA 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 117 IFFSYLITFTMMMMILVTAENMFQFFIGWEGVGIMSFMLINWWSFRSSSNKAAMQAVVYNRLADIGLIITMAWMVINNTS 196
Cdd:COG1009 112 RFFAYLLLFMAAMLGLVLSDNLLLLFVFWELVGLCSYLLIGFWYEKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGT 191
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 197 LSIKGVQA------PPDLALIPALGLVLAAAGKSAQFGFHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIRTSDLLYSS 270
Cdd:COG1009 192 LNFSELLAaaptilSSPLLTLILLLLLLGAFGKSAQFPLHFWLPDAMEGPTPVSALLHAATMVKAGVYLLARLSPLFALS 271
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 271 ETATTICLFLGAITSLLAATCALAQNDLKKIIAYSTTSQLGLMMISIGLKQPELAFMHISTHAFFKAMLFLCAGTIIHNL 350
Cdd:COG1009 272 PVWLTVVAIIGAITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVGAYVAALFHLLTHAFFKALLFLGAGSVIHAT 351
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 351 dNEQDIRKMGGLKKALPITSSCLVIGSLALSGMPFMAGFYSKDAIIES-INTSNVNSLSLAMTLMATILTTFYSLRMIYY 429
Cdd:COG1009 352 -GTRDIRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEAaLEAGGLGPLLLAVALLGAFLTAFYSFRLFFL 430
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 430 VALNTPRILPLSSISENPQT-TNPILRLAVGSIAAGL--------LISSTILPTNIPQLTMPASAKLAALGILMLGLLVG 500
Cdd:COG1009 431 VFFGKPRPKTPKHPHESPWLmTLPLVVLAVLSLVLGLllpgllegLLAPAAVLGGELHLAHGLLLNALPLLLSLLGIALG 510
|
...
gi 187250407 501 SAL 503
Cdd:COG1009 511 YLL 513
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
4-521 |
8.62e-123 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 376.81 E-value: 8.62e-123
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 4 TSMLTMTLFmLPL--FILALPTLTPTSKLIPHpSTNVLAAKLAFFTSLFPLAHFIHTGMTTTTCET-QLLTMGTTTIQVT 80
Cdd:PRK06590 2 MNLLWLIVL-LPLigALILGLFGRRIGEKWAH-LVGTGLVGLSALLSLVVFFDFLLGGGRAFSQTLwTWISVGDFDVDFG 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 81 LTLDSYSTFFMPILLFVVWSIMDFTVQYMKPDLKVSIFFSYLITFTMMMMILVTAENMFQFFIGWEGVGIMSFMLINWWS 160
Cdd:PRK06590 80 LRVDGLSATMLVVVTGVSFLVHIYSIGYMAHDEGYRRFFAYLNLFTFSMLMLVLSDNLLQLFFGWEGVGLCSYLLIGFWY 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 161 FRSSSNKAAMQAVVYNRLADIGLIITMAWMVINNTSLSIKGV--------QAPPDLALIPALGLVLAAAGKSAQFGFHPW 232
Cdd:PRK06590 160 KKPSAGAAAMKAFIVNRVGDVGLALGIFLLFAEFGSLNYDEVfaaapqffGLGWSALTLICLLLFIGAMGKSAQFPLHTW 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 233 LPAAMEGPTPVSALLHSSTMVVAGVFLLIRTSDLLYSSETATTICLFLGAITSLLAATCALAQNDLKKIIAYSTTSQLGL 312
Cdd:PRK06590 240 LPDAMEGPTPVSALIHAATMVTAGVYLVARMSPLFELSPEALLFVAIVGAVTALFAAFIGLVQTDIKRVLAYSTMSQLGY 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 313 MMISIGLKQPELAFMHISTHAFFKAMLFLCAGTIIHNLDNEQDIRKMGGLKKALPITSSCLVIGSLALSGMPFMAGFYSK 392
Cdd:PRK06590 320 MFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQDIRKMGGLRKKMPVTYATFLIGTLALIGIPPFAGFFSK 399
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 393 DAIIESInTSNVNSLSLAMTLMATILTTFYSLRMIYYVALNTPRiLPLSSISENPQT-TNPILRLAVGSIAAGLLIS--- 468
Cdd:PRK06590 400 DEILEAA-FANGHINLFVAGLVGAFLTAFYSFRLIFLVFHGKEK-EKIHHPHESPAVmTLPLIVLAVLSVFAGALIVppf 477
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*....
gi 187250407 469 STILPT------NIPQLTMPASAKLAALGILMLGLLVGSALVMMANQLPTSIKGSQTPL 521
Cdd:PRK06590 478 LGVLPLttelahGEAEHHLPVWVALLPLVVALAGIALAWLLYLKKPTLPTSIAAPGRFL 536
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
6-569 |
8.22e-118 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 363.53 E-value: 8.22e-118
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 6 MLTMTLFMLPL--FILALPTLTPTSKLIPHpSTNVLAAKLAFFTSLFPLAHFIHTGMTTTTCET--QLLTMGTTTIQVTL 81
Cdd:TIGR01974 1 NLIFLIVFLPLigFLIAGLFGRRIGERVSG-IIGIGSVGLSAALSAFVFVDFFLNGEGEAFTQSlfPWISVGGFQVDFGL 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 82 TLDSYSTFFMPILLFVVWSIMDFTVQYMKPDLKVSIFFSYLITFTMMMMILVTAENMFQFFIGWEGVGIMSFMLINWWSF 161
Cdd:TIGR01974 80 RLDGLSLTMLVVVTGVGSLVHIYSIGYMAHDEGYSRFFAYLNLFTFSMLMLVLADNFLQLFFGWEGVGLCSYLLIGFWYK 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 162 RSSSNKAAMQAVVYNRLADIGLIITMAWMVINNTSLSIKGVQA------PPDLALIpALGLVLAAAGKSAQFGFHPWLPA 235
Cdd:TIGR01974 160 KPSANNAAIKAFVVNRVGDFGLLLGIFLIFWYFGTLNFQEVFAlapgafFSALTLI-CLLLFIGAMGKSAQLPLHTWLPD 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 236 AMEGPTPVSALLHSSTMVVAGVFLLIRTSDLLYSSETATTICLFLGAITSLLAATCALAQNDLKKIIAYSTTSQLGLMMI 315
Cdd:TIGR01974 239 AMEGPTPVSALIHAATMVTAGVYLVARTSPLFELSPTALYLVTIIGAITALFAATVALVQNDIKRILAYSTMSQLGYMFL 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 316 SIGLKQPELAFMHISTHAFFKAMLFLCAGTIIHNLDNEQDIRKMGGLKKALPITSSCLVIGSLALSGMPFMAGFYSKDAI 395
Cdd:TIGR01974 319 ALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQDIRKMGGLRKKMPVTYITFLIGSLALIGFPGFAGFFSKDLI 398
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 396 IESINTSNVNSLSLAMTLMATILTTFYSLRMIYYVALNTPRILPLSSISENPQT-TNPILRLAVGSIAAGLLIS------ 468
Cdd:TIGR01974 399 LEAAFASGTHSFLFVAGLIGAFLTAFYSFRLIFMVFHGKERHEADAHPHESPLVmLLPLIVLAVGSVFAGFFIVplfefl 478
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 469 STILPTNIPQLT----MPASAKLAALGILMLGLLVGSALVMMANQLPTSIKGSQTPL---LFKIMHFYFILHHTLPTAIL 541
Cdd:TIGR01974 479 KGVLPTSAEPALehhhVPALEIWSPTAVAILGILLAYLLYLGNPTLPAKIAQRHSGLyrlLLNKWYFDELYDKVFVKPYL 558
|
570 580
....*....|....*....|....*...
gi 187250407 542 QISqKLLTHLMDQTHYEALGPKAATYLQ 569
Cdd:TIGR01974 559 FLG-KLLWKDPDDKIIDGFGPGIARLVG 585
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
93-579 |
2.36e-112 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 349.38 E-value: 2.36e-112
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 93 ILLFVVWSIMD----FTVQYMKPDLKVSIFFSYLITFTMMMMILVTAENMFQFFIGWEGVGIMSFMLINWWSFRSSSNKA 168
Cdd:MTH00020 84 IMLLVVTTVSTlvhiFSTAYMRGDPHIPRFMSYLSLFTFLMVVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTRIEANKA 163
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 169 AMQAVVYNRLADIGLIITMAWMVINNTSLSIKGV-----QAPPDLALIPALGLVLAAAGKSAQFGFHPWLPAAMEGPTPV 243
Cdd:MTH00020 164 AIKAMLVNRVGDIGLLLAMFLLWDRFGSLDFSSVfnmvvSAPSSDITLICLFLFIGAVGKSAQLGLHTWLPDAMEGPTPV 243
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 244 SALLHSSTMVVAGVFLLIRTSDLLYSSETATTICLFLGAITSLLAATCALAQNDLKKIIAYSTTSQLGLMMISIGLKQPE 323
Cdd:MTH00020 244 SALIHAATMVTAGVFLLIRSSPLFEQAPLALIIVTIVGSLTVFFAATVGLVQNDLKKVIAYSTCSQLGYMVVACGLSHYS 323
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 324 LAFMHISTHAFFKAMLFLCAGTIIHNLDNEQDIRKMGGLKKALPITSSCLVIGSLALSGMPFMAGFYSKDAIIESINTSN 403
Cdd:MTH00020 324 ISLFHLMNHAFFKALLFLSAGSVIHALSDEQDMRKMGGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSKDLILELAFGQY 403
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 404 VNSLSLAMTLMATILTTFYSLRMIYYVALNTP--RILPLSSISE-NPQTTNPILRLAVGSIAAGLLISSTILPTNI-PQL 479
Cdd:MTH00020 404 YLIFAYWLGCFSALLTAFYSIRLIYLTFLSNTnlKKAVFFHLHEgDWNLLLPLGILALGSIFVGYLAKEMIWSFQItLPP 483
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 480 TMPASAKLAALGILMLGLLVGSALVMMANQL---PTSIKGSQTPL-LFKIMHFYFILHHTLPTAILQISQKLLTHLMDQT 555
Cdd:MTH00020 484 IVPLSIKLLPVFLSLGGIGLVIILYFYSSKTfrvPFSFIGRNSYTfLGSAWQFNYILNYFLIKKIWKGGHLISYRTIDKG 563
|
490 500
....*....|....*....|....
gi 187250407 556 HYEALGPKAATYLQMLMSKILTNF 579
Cdd:MTH00020 564 VLELVGPKGISNFLIILTQGLSSL 587
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
93-579 |
2.77e-109 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 341.60 E-value: 2.77e-109
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 93 ILLFVVWSIMD----FTVQYMKPDLKVSIFFSYLITFTMMMMILVTAENMFQFFIGWEGVGIMSFMLINWWSFRSSSNKA 168
Cdd:MTH00210 84 TMLIVITSVSAlvhiYSTGYMSGDPHIPRFMSYLSLFTFLMIVLVTSDNYVQLFIGWEGVGLCSYLLINFWLTRIKANKA 163
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 169 AMQAVVYNRLADIGLIITMAWMVINNTSL------SIKGVQAPPDLALIPALGLVLAAAGKSAQFGFHPWLPAAMEGPTP 242
Cdd:MTH00210 164 AIKAMLINRVGDIGLVLAMIMILKEFGTLefstisSLLVTNINKESLTIICLLLFIGAVGKSAQLGLHTWLPDAMEGPTP 243
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 243 VSALLHSSTMVVAGVFLLIRTSDLLYSSETATTICLFLGAITSLLAATCALAQNDLKKIIAYSTTSQLGLMMISIGLKQP 322
Cdd:MTH00210 244 VSALIHAATMVTAGVFLIIRSGPLFEGSPLALTIVTILGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYMVMVCGISNY 323
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 323 ELAFMHISTHAFFKAMLFLCAGTIIHNLDNEQDIRKMGGLKKALPITSSCLVIGSLALSGMPFMAGFYSKDAIIESINTS 402
Cdd:MTH00210 324 STSLFHLMNHAFFKALLFLSAGSVIHAVSDEQDMRKMGGLIKSIPFTYVMILIGSLSLMGFPYLTGFYSKDLILELTYDK 403
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 403 NVNSLSLAMTLMATILTTFYSLRMIYYVALNTPRILPLSSISENPQTTN---PILRLAVGSIAAGLLISSTILpTNIPQL 479
Cdd:MTH00210 404 YYIAFAYWLGSFSALLTAFYSIRLIYLTFITNTNSKKEVFIGVHESSWNitfPLLLLAFGSIFVGYLGKEVVL-SNVIPP 482
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 480 TMPASAKLAALGILMLGLLVGSALVMMANQLPTSIKGSQTPLLFKIMHFYF--------ILHHTLPTAILQISQKLLTHL 551
Cdd:MTH00210 483 IVPNSIKMIPLLFSLLGALLAFVIYNSMVFLIKISRRGVSIRLYHVIYTFLnsawqfnyVINHFIVKNIWKFGHLITYRI 562
|
490 500
....*....|....*....|....*...
gi 187250407 552 MDQTHYEALGPKAATYLQMLMSKILTNF 579
Cdd:MTH00210 563 IDRGLLEIIGPRGISKVLIKLTQKISNL 590
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
43-506 |
1.08e-104 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 327.96 E-value: 1.08e-104
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 43 LAFFTSLFPLAHFIHTGMTTTTCETQLLTMGTTTIQVTLTLDSYSTFFMPILLFVVWSIMDFTVQYMKPDLKVSIFFSYL 122
Cdd:MTH00151 12 FSYSVFLFPLLGYFGLNGISLIFEWELLSVSSCSFSFELVLDWVSLSFSGVVCLISGCVFLFSSSYMSEDPFLKRFMWLV 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 123 ITFTMMMMILVTAENMFQFFIGWEGVGIMSFMLINWWSfRSSSNKAAMQAVVYNRLADIGLIITMAWMVINNTSLSIKGV 202
Cdd:MTH00151 92 MLFVLSMNLLIFIPSLPSLLLGWDGLGIVSFALVIYYQ-NKKSLSAGMLTALTNRIGDVLILLSIALLVLLGHWSILSMW 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 203 QAPPdlALIPALGLVLAAAGKSAQFGFHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIRTSDLLYSSETATTICLFLGA 282
Cdd:MTH00151 171 DFKL--SGWLGLLLVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFFPFLSSSSGFSSFLLFISL 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 283 ITSLLAATCALAQNDLKKIIAYSTTSQLGLMMISIGLKQPELAFMHISTHAFFKAMLFLCAGTIIHNLDNEQDIRKMGGL 362
Cdd:MTH00151 249 LTLLMAGISACYENDLKKIIALSTLSQLGVMMFSLGLGMPSLALFHLYTHALFKALLFLCAGSIIHSSSGTQDIRLLGSL 328
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 363 KKALPITSSCLVIGSLALSGMPFMAGFYSKDAIIESINTSNVNSLSLAMTLMATILTTFYSLRMIYYVALNTPRILPLSS 442
Cdd:MTH00151 329 FLSLPLTSGCLNISSLSLCGAPFLSGFYSKDLILESSLMSPTSLLMVLLMFVGVGLTALYSARLSFCLVWGSMKSSSLSS 408
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 187250407 443 ISENPQTTN-PILRLAVGSIAAGLLISSTILPTNIPqLTMPASAKLAALGILMLGLLVGSALVMM 506
Cdd:MTH00151 409 KSDEDFYVSlPMLLLSLGALIGGKLLQSLFEGFSEE-FFLPSYLKLLIGFVILLGLFLSFGFWDS 472
|
|
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
69-588 |
3.00e-99 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 314.00 E-value: 3.00e-99
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 69 LLTMGTTTIQVTLTLDSYSTFFMPILLFVVWSIMDFTVQYMKPDLKVSIFFSYLITFTMMMMILVTAENMFQFFIGWEGV 148
Cdd:MTH00165 38 LFSLNSSSIVMTFLFDWMSLLFMSFVLFISSMVIYYSKSYMSGDKNINRFIYLVLLFVLSMMLLIISPNLISILLGWDGL 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 149 GIMSFMLINWWSfRSSSNKAAMQAVVYNRLADIGLIITMAWMVINNTS--LSIKGVQAPPDLALIPALGLVLAAAGKSAQ 226
Cdd:MTH00165 118 GLVSYCLVIYYQ-NKKSYNAGMLTALSNRIGDVAILLSIAWMMNFGSWnfIFYLDFMKNSFEMLLIGLLIMLAAMTKSAQ 196
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 227 FGFHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIRTSDLLYSSETaTTICLFLGAITSLLAATCALAQNDLKKIIAYST 306
Cdd:MTH00165 197 IPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNNLLFSSFF-SKFLLLISLLTMFMAGLGANFEFDLKKIIALST 275
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 307 TSQLGLMMISIGLKQPELAFMHISTHAFFKAMLFLCAGTIIHNLDNEQDIRKMGGLKKALPITSSCLVIGSLALSGMPFM 386
Cdd:MTH00165 276 LSQLGLMMSILSLGFPKLAFFHLLTHALFKALLFLCAGSIIHNMSNSQDIRFMGGLSNFMPLTSSCFNISNLSLCGFPFL 355
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 387 AGFYSKDAIIESINTSNVNSLSLAMTLMATILTTFYSLRMIYYVALNTPRILPLSSISENPQT-TNPILRLAVGSIAAGL 465
Cdd:MTH00165 356 SGFYSKDLILEMVSMSNLNFFIFFLFFFSTGLTVSYSFRLIYYSMSGDFNLKSLNNLSDESKFmLKSMILLLFMSIFGGS 435
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 466 LISSTILPTNIpQLTMPASAKLAALGILMLGLLVGSALVMMA-NQLPTSIKGSQTPLLFKIMHFY-FILHHTLPTAILQI 543
Cdd:MTH00165 436 MLSWLIFPEPY-MICLPFYLKLLTLFVILLGGWLGYELSLMSlSYNLKSLKNYKLSSFLGSMWFMpFLSTYGISYYPLNL 514
|
490 500 510 520
....*....|....*....|....*....|....*....|....*
gi 187250407 544 SQKLLThLMDQTHYEALGPKAATYLQMLMSKILTNFHKARINPYL 588
Cdd:MTH00165 515 GSLSLK-SFDQGWSEYFGGQGLYNFLKKLSKLIQWLQNNNLKIYL 558
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
68-588 |
3.63e-99 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 313.51 E-value: 3.63e-99
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 68 QLLTMGTTTIQVTLTLDSYSTFFMPILLFVVWSIMDFTVQYMKPDLKVSIFFSYLITFTMMMMILVTAENMFQFFIGWEG 147
Cdd:MTH00209 35 ELLSLNSMSISFPLIIDKMSLLFSSVVLLISGSVMWFSTSYMAGEKFKKRFILLVLLFILSMNFLIFVPNLITLLLGWDG 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 148 VGIMSFMLINWWSfRSSSNKAAMQAVVYNRLADIGLIITMAWMvINNTSLSIKGVQAPPDLALIPALGLVLAAAGKSAQF 227
Cdd:MTH00209 115 LGLVSYLLVIYYQ-NSKSLSAGMLTALTNRVGDALLILSIAWM-LMHGNWNIFYLNFNSNLGSVISVLIVLAAMTKSAQI 192
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 228 GFHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIRTSDLLYSSETATTICLFLGAITSLLAATCALAQNDLKKIIAYSTT 307
Cdd:MTH00209 193 PFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSLFSSPFFSMSLLLLGSLTTLMASMSANVESDLKKIIALSTL 272
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 308 SQLGLMMISIGLKQPELAFMHISTHAFFKAMLFLCAGTIIHNLDNEQDIRKMGGLKKALPITSSCLVIGSLALSGMPFMA 387
Cdd:MTH00209 273 SQLGLMMCSLGLNQPELAFFHLITHALFKALLFICAGNIIHSHGHSQDIRMVGNLWYQMPITSICLNIANLSLCGIPFLA 352
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 388 GFYSKDAIIESINTSNVNSLSLAMTLMATILTTFYSLRMIYYVALNTPRILPLSSISE-NPQTTNPILRLAVGSIAAGLL 466
Cdd:MTH00209 353 GFYSKDLILESMLESNMPIMTLILMFLSTSLTAAYSMRLSYFSLWGPNSSKSLNSSFDqNKLNLKPMLVLTLGSITGGSV 432
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 467 ISSTILPTNIPqLTMPASAKLAALGILMLGLLVGsaLVMMANQLPTSIKGSQTPLLFKIMHFYFILHHTLPTAILQISQK 546
Cdd:MTH00209 433 MSWVMVPSVNS-VVLPWFLKLLPIMLILFGVLLM--YMVLKKNFFLIKGYKVNYFLSQMWFLPDLSSQPVNKFTMKLSKT 509
|
490 500 510 520
....*....|....*....|....*....|....*....|..
gi 187250407 547 LLtHLMDQTHYEALGPKAATYLQMLMSKILTNFHKARINPYL 588
Cdd:MTH00209 510 ML-KLLDQGWVEKMSGQGSFKVLKKSSKLSQIIQNNSLKLFV 550
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
33-588 |
8.90e-94 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 299.76 E-value: 8.90e-94
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 33 HPSTNVLAAKLAFFTSL--FPLAHFIHTGMTTTTCETQLLTMGTTTIQVTLTLDSYSTFFMPILLFVVWSIMDFTVQYMK 110
Cdd:MTH00207 3 MFKPSSIASYLLWFMSIlmFPLSLYLMMCNKTILIEWEIFTISSSPINFTIILDPTGTLFSSTVLFISANVLLFAKTYMQ 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 111 PDLKVSIFFSYLITFTMMMMILVTAENMFQFFIGWEGVGIMSFMLINWWSfRSSSNKAAMQAVVYNRLADIGLIITMAWm 190
Cdd:MTH00207 83 EDKFLSRFISLVLLFVLSMNMLIFFPHLMILLLGWDGLGLVSFILVIYYQ-NPKSLGAGMITALTNRIGDVMLLLSIGW- 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 191 VINNTSLSIKGVQAPPDLALIpALGLVLAAAGKSAQFGFHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIRTSDLLYSS 270
Cdd:MTH00207 161 TLNQGHWSITNMWQTDMNNYI-ALSIMIAAMTKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYPFLSST 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 271 ETATTICLFLGAITSLLAATCALAQNDLKKIIAYSTTSQLGLMMISIGLKQPELAFMHISTHAFFKAMLFLCAGTIIHNL 350
Cdd:MTH00207 240 YWFNPALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGMPKLALFHLITHALFKALLFVCAGSLIHSH 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 351 DNEQDIRKMGGLKKALPITSSCLVIGSLALSGMPFMAGFYSKDAIIESINTSNVNSLSLAMTLMATILTTFYSLRMIYYV 430
Cdd:MTH00207 320 HHSQDLRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILESSLFYPHNSLMILMIFLATALTAAYSTRFTLAV 399
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 431 ALNTPRILPLSSISE-NPQTTNPILRLAVGSIAAGLLIsSTILPTNIPQLTMPASAKLAALGILMLG-LLVGSALVMMAN 508
Cdd:MTH00207 400 LWSPNSSSPYHHLEDeDKSLTTPMLLLTLGAITSGSAL-NWWLPTPQEEPILPLQYKLLPLLVVTLGaLLAWLFTTPNIT 478
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 509 QLPTSIKGSQTPLLFKIMHFYFILHHTLPTAILQISQKLLTHLMDQTHYEALGPKAATYLQMLMSKILTNFHKARINPYL 588
Cdd:MTH00207 479 KTPLLINNPLSHFASCLMWFLVPLSSQFIMSTPMNLSHNYLKLLDQGWLEMLGAQGTFKMFSRSSNNVMKLQKNIPNNYL 558
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
78-587 |
4.76e-81 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 268.75 E-value: 4.76e-81
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 78 QVTLTLDSYSTFFMPILLFVVWSIMDFTVQYMKPDLKVSIFFSYLITFTMMMMILVTAENMFQFFIGWEGVGIMSFMLIN 157
Cdd:MTH00032 73 HIGLLYDTLSVTMLLVISSISTLVHIYSTSYMSDDPHVPRFLCYLSLFTFLMMVLVTSDNYLQLFIGWEGVGVCSYLLVA 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 158 WWSFRSSSNKAAMQAVVYNRLADIGLIITMAWM--------------------VINNTSLSIKGVQAPPDLALIPALGLV 217
Cdd:MTH00032 153 FWTTRIQANKAAIKAIVVNRVGDVGVILGMVLIyktigsldfltfnggsvgsgIMDRGYYGGGAYESPLAPFAIIGILLL 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 218 LAAAGKSAQFGFHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIRTSDLLYSSETATTICLFLGAITSLLAATCALAQND 297
Cdd:MTH00032 233 IGCIGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLLIITIFGALTAFFAATVGLVQND 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 298 LKKIIAYSTTSQLGLMMISIGLKQPE-LAFMHISTHAFFKAMLFLCAGTIIHNLD-NEQDIRKMGGLKKALPITSSCLVI 375
Cdd:MTH00032 313 LKKVIAYSTCSQLGYMVLIIGIEGSHnVGLFHLVNHAFFKALLFLSAGSVIHSTTvDEQDMRKMGGLIHSIPFTYTMMLI 392
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 376 GSLALSGMPFMAGFYSKDAIIE------------------------------------SINTSNVNSLSLAMTLMATILT 419
Cdd:MTH00032 393 GSFSIMGLPYLTGFYSKDLILEltysgrnmgipfgssllkiqgdigikkddrgsiggpEGYPSRGSAFAFWLGTVAALLT 472
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 420 TFYSLRMIYYVALNTPRILPLSSISENPQTTNP-----ILRLAVGSIAAGLLISSTIL-----PTNIPQL-TMPASAKLA 488
Cdd:MTH00032 473 AFYSIRLVYITFIISPNSPKESLISSHINIVDKrvltvLSLLCFGAIFVGYLIQDILIgdiehPIVPPLIkVMPTLMGLF 552
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 489 ALGILMLGLLVGSALVMM--ANQLPTSIKGSQTPLLFKIMHFYFILHHTLPTAILQISQKLLTHLMDQTHYEALGPKAAT 566
Cdd:MTH00032 553 GMGLCLWAQKGTREGELYwgFDPIGPSFLLSIYSFLGGAWQGDHLINKLVAIPLFSFGHWGIYKTLDRGWLELFGPQGIS 632
|
570 580
....*....|....*....|.
gi 187250407 567 YLQMLMSKILTNFHKARINPY 587
Cdd:MTH00032 633 TIALRVSQFISNLQSGVISRY 653
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
72-426 |
9.93e-81 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 268.05 E-value: 9.93e-81
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 72 MGTTTIQVTLTLDSYSTFFMPILLFVVWSIMDFTVQYMKPDLKVSIFFSYLITFTMMMMILVTAENMFQFFIGWEGVGIM 151
Cdd:PRK07376 78 AGDFHLPMGYVIDPLGAVMLVLVTTVALLVMIYSDGYMAHDPGYVRFFAYLSLFSSSMLGLVISPNLVQIYVFWELVGMC 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 152 SFMLINWWSFRSSSNKAAMQAVVYNRLADIGLIITMA---WM--------VINNTSLSIKGVQAPPDLALIPALGLVLAA 220
Cdd:PRK07376 158 SYLLVGFWYDRKGAADAAQKAFVVNRVGDFGLLLGILglfWAtgsfdfdgIADRLSELVSSGAVSGWLALLLCILVFLGP 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 221 AGKSAQFGFHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIRTSDLLYSSETATTICLFLGAITSLLAATCALAQNDLKK 300
Cdd:PRK07376 238 MAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGVFLVARMYPVFEQFPAVMTVIAWTGAITAFLGASIALTQNDIKK 317
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 301 IIAYSTTSQLGLMMISIGLKQPELAFMHISTHAFFKAMLFLCAGTIIHNLDN--------EQDIRKMGGLKKALPITSSC 372
Cdd:PRK07376 318 GLAYSTISQLGYMVMAMGCGAYSAGLFHLMTHAYFKAMLFLGSGSVIHGMEEvvghdpvlAQDMRLMGGLRKYMPITAIT 397
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 187250407 373 LVIGSLALSGMPFMAGFYSKDAIIESinTSNVNSLSLAMTLMATILTTFYSLRM 426
Cdd:PRK07376 398 FLIGCLAISGIPPFAGFWSKDEILGA--AFEANPALWFVGFLTAGMTAFYMFRM 449
|
|
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
118-456 |
1.91e-66 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 230.93 E-value: 1.91e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 118 FFSYLITFTMMMMILVTAENMFQFFIGWEGVGIMSFMLINWWSFRSSSNKAAMQAVVYNRLADIGL---IITMAWM---- 190
Cdd:CHL00025 124 FFAYLSFFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLllgILGFYWItgsf 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 191 ------VINNTSLSIKGVQapPDLALIPALGLVLAAAGKSAQFGFHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIRTS 264
Cdd:CHL00025 204 efrdlfEIFNNLIYNNEVN--LLFATLCAFLLFLGPVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLL 281
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 265 DLLYSSETATTICLFLGAITSLLAATCALAQNDLKKIIAYSTTSQLGLMMISIGLKQPELAFMHISTHAFFKAMLFLCAG 344
Cdd:CHL00025 282 PLFIVIPYIMNLISLIGIITALLGATLALAQKDIKRGLAYSTMSQLGYMMLALGIGSYRAALFHLITHAYSKALLFLGSG 361
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 345 TIIHNL--------DNEQDIRKMGGLKKALPITSSCLVIGSLALSGMPFMAGFYSKDAIiesINTSNVNSLSLAMTLMAT 416
Cdd:CHL00025 362 SVIHSMepivgyspDKSQNMVLMGGLRKYMPITKTTFLLGTLSLCGIPPLACFWSKDEI---LNDSWLYSPIFAIIAWST 438
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 187250407 417 I-LTTFYSLRM----------IYYVALNTPRILPLSSIS----ENPQTTNPILRL 456
Cdd:CHL00025 439 AgLTAFYMFRIylltfeghlrVHFQNYSGKKNSSFYSISlwgkEESKKINKLLLL 493
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
108-439 |
4.99e-56 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 204.27 E-value: 4.99e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 108 YMKPDLKVSIFFSYLITFTMMMMILVTAENMFQFFIGWEGVGIMSFMLINWWSFRSSSNKAAMQAVVYNR---LADIGLI 184
Cdd:PRK12648 99 YLSPADPVPRFFSFLLLFMGAMLGIVLSGNLILLVVFWELTSLSSFLLIGYWHHRADARRGARMALTVTGaggLALLAGV 178
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 185 ITMAWMVinnTSLSIKGVQAPPDL----AL-IPALGLVLAAA-GKSAQFGFHPWLPAAMEGPTPVSALLHSSTMVVAGVF 258
Cdd:PRK12648 179 LLLGHIV---GSYDLDVVLAAGDLirahPLyPPALVLILLGAfTKSAQFPFHFWLPHAMAAPTPVSAYLHSATMVKAGVF 255
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 259 LLIRTSDLLYSSETATTICLFLGAITSLLAATCALAQNDLKKIIAYSTTSQLGLMMISIGLKQPeLAFM----HISTHAF 334
Cdd:PRK12648 256 LLARLWPVLAGTEEWFWIVGGAGLITLLLGAYFALFQHDLKGLLAYSTISHLGLITLLLGLGSP-LAAVaaifHIINHAT 334
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 335 FKAMLFLCAGTIihnlDNE---QDIRKMGGLKKALPITSSCLVIGSLALSGMPFMAGFYSKDAII-ESINTSNVNSLSLA 410
Cdd:PRK12648 335 FKASLFMAAGII----DHEtgtRDMRRLSGLRRLMPITATLAMVAAAAMAGVPLLNGFLSKEMFFaETLDTHLLGSLDWL 410
|
330 340 350
....*....|....*....|....*....|...
gi 187250407 411 MTLMATILTTF---YSLRMIYYVALNTPRI-LP 439
Cdd:PRK12648 411 LPVAATLAGAFsvaYSLRFIHDVFFGPPPDdLP 443
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
38-417 |
1.46e-53 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 195.52 E-value: 1.46e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 38 VLAAKLAFFTSLFPLAHFIHTGMTTTTCET-QLLTMGTT-----TIQVTLTLDSYSTFFMPILLFVVWSIMDFTVQYMKP 111
Cdd:PRK12647 11 LFGRNAGWLLALLPLALFLYFLSFIPEIAAgETVRGGYAwvpslGVNLSFLLDGLSLTFALLITGIGTLIVLYAGGYLKG 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 112 DLKVSIFFSYLITFTMMMMILVTAENMFQFFIGWEGVGIMSFMLINWWSFRSSSNKAAMQAVVYNRLADIGLI--ITMAW 189
Cdd:PRK12647 91 HPDLGRFYSYILLFMASMLGLVLSDNLITLFVFWELTSITSFLLIGFNHEREAARRAALQALLVTGGGGLALLagLILLG 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 190 MVINNTSLSI-----KGVQAPPdlALIPALGLVLAAA-GKSAQFGFHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIRT 263
Cdd:PRK12647 171 NVTGTYSLSEllasgDVIREHP--LYLAILLLVLGGAfTKSAQFPFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARL 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 264 SDLLYSSETATTICLFLGAITSLLAATCALAQNDLKKIIAYSTTSQLGLMMISIGLKQP---ELAFMHISTHAFFKAMLF 340
Cdd:PRK12647 249 NPVLGGTPLWQTILPLFGGLTMLTGALLAVRQTDLKLILAYSTVSALGTLVMLLGLGSElaiKAAVLFLVAHSLYKGALF 328
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 187250407 341 LCAGTIIHNLdNEQDIRKMGGLKKALPITSSCLVIGSLALSGMPFMAGFYSKDAIIESIntSNVNSLSLAMTLMATI 417
Cdd:PRK12647 329 MVAGIIDHET-GTRDITKLGGLRRAMPITAAAALLAALSMAGLPPLFGFLAKELIYEAL--LEAPLWSLILTVAAVL 402
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
135-410 |
2.97e-53 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 184.05 E-value: 2.97e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 135 AENMFQFFIGWEGVGIMSFMLINWWSFRSSSNKAAMQAVVYNRLADIGLIITMAWMVINNTSLSI----KGVQAPPD--L 208
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFdelsKALTGGLNssG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 209 ALIPALGLVLAAAGKSAQFGFHPWLPAA-MEGPTPVSALLhSSTMVVAGVFLLIRTSDLL-YSSETATTICLFLGAITSL 286
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLLYlPSSPFIQQILLILAIISML 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 287 LAATCALAQNDLKKIIAYSTTSQLGLMMISIGLKQP---ELAFMHISTHAFFKAMLFLCAGTIIHNLDNEQDIRKMGGLK 363
Cdd:pfam00361 160 LGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIygiQAAIFHLLTHGLFSAGLFLCAGSVIYRRVHTRNIRDYGGLA 239
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 187250407 364 KALPITSSCLVIGSLALSGMPFMAGFYSKDAIIESINTSNVNSLSLA 410
Cdd:pfam00361 240 KTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLA 286
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
114-466 |
2.47e-52 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 193.60 E-value: 2.47e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 114 KVSIFFSYLITFTMMMMILVTAENMFQFFIGWEGVGIMSFMLINWWSFRSSSNKAAMQAVVYNRLAdiGLIITMAWMVIN 193
Cdd:PRK12644 104 RLGRFAAELVAFAGAMFGLVTSDNLLLLYVFWELTTVLSFLLIGHYAERAASRRAALQALLVTTAG--GLAMLVGIIILG 181
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 194 NT--SLSIKGVQA-PPDLALIP-ALGLVLA-AAGKSAQFGFHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIRTSDLLY 268
Cdd:PRK12644 182 QAagTYRLSELLAdPPTGPAVSvAVVLILVgALSKSAIVPFHFWLPGAMAAPTPVSAYLHAAAMVKAGIYLVARLAPGFA 261
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 269 SSETATTICLFLGAITSLLAATCALAQNDLKKIIAYSTTSQLGLMMISIGLKQPELAFMHIS---THAFFKAMLFLCAGT 345
Cdd:PRK12644 262 DVPVWRPTVLVLGLATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLAmllAHALFKAALFLVVGI 341
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 346 IIHNlDNEQDIRKMGGLKKALPITSSCLVIGSLALSGMPFMAGFYSKDAIIESINTSNVNS----LSLAMTLMATILTTF 421
Cdd:PRK12644 342 IDHS-TGTRDIRKLSGLGRRQPVLAVVAALAAASMAGLPPLLGFVAKEAALEAVLHDGALGpagpVVLAGIVLGSILTVA 420
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 187250407 422 YSLRMIYYVALNTPRILPLSSISE----NPQTTNPILRLAVGSIAAGLL 466
Cdd:PRK12644 421 YSLRFLWGAFARKPGAFPSVAVTEmhrpSPLFLAPPAVLAVLGLVLGLL 469
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
77-468 |
2.06e-51 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 191.02 E-value: 2.06e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 77 IQVTLTLDSYSTFFMPILLFVVWSIMDFTVQYMKPDLKVSIFFSYLITFTMMMMILVTAENMFQFFIGWEGVGIMSFMLI 156
Cdd:PRK12650 71 VNLALRADALSLFFALLALVIGAVVFIYSARYLPRKKGNTSFYLLMTAFMAAMLLLVLADDVVVLFVAWELVSLASFFLI 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 157 NwwsfRSSSN--KAAMQAVVYNRLADIGLIITMAWMVINNTSLSIKGVQAPPDLALIPALGLVLA------AAGKSAQFG 228
Cdd:PRK12650 151 A----RSGSGgeAGSIRTLILTFFGGLTLLAAVAIAATQTGTTSLSGILHSDVWAEKPGLTTVVAvliavaAFTKSAQFP 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 229 FHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIRTSDLLYSSETATTICLFLGAITSLLAATCALAQNDLKKIIAYSTTS 308
Cdd:PRK12650 227 FHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVAVWNWLLIIVGMITALMGAVFAVQKTDLKKLTAYSTVS 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 309 QLGLMMISIGLKQP---ELAFMHISTHAFFKAMLFLCAGTIIHNLdNEQDIRKMGGLKKALPITSSCLVIGSLALSGMPF 385
Cdd:PRK12650 307 QLGWIVATIGVGTPfalTAAVVHTLAHALFKSSLFMLIGVVDHQA-GTRDIRRLGSLWRRMPFTFVSVTIAALSMAAVPP 385
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 386 MAGFYSKDAIIES-----INTSNVNSLSLAMTLMAtILTTFYSLRMIYYVALNTPRilPLSSISENPQTT-NPILRLAVG 459
Cdd:PRK12650 386 LFGFVSKEGMLTAfleapGGNAGVVLLLVGAALGA-VFTFAYSARLVLGAFVDGPR--DMSHVKEAPVSLwLPAALPGAL 462
|
....*....
gi 187250407 460 SIAAGLLIS 468
Cdd:PRK12650 463 SLPLGLVPG 471
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
14-431 |
3.06e-51 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 182.65 E-value: 3.06e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 14 LPLFILALPTLTPTSKLIPHPSTNVLAAkLAFFTSLFPLAHFIHTGMTTTTCETQLLTMGT--TTIQVTLTLDSYSTFFM 91
Cdd:COG0651 4 LLILPVLLPLLAAALLLLLGRRRRLQRA-LSLLASLALLALALALLLQVLAGGPLVYALGGwpAPFGIVLVADRLSALFL 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 92 PILLFVVWSIMDFTVQYMKPDLKVSIFFSYLITFTMMMMILVTAENMFQFFIGWEGVGIMSFMLINWWSFRSSSnKAAMQ 171
Cdd:COG0651 83 LLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKEAL-RAGLK 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 172 AVVYNRLADIGLIITMAWM-----VINNTSLSIKGVQAPPDLALIPALGLVLAAAGKSAQFGFHPWLPAAM-EGPTPVSA 245
Cdd:COG0651 162 YLILNLVGSALFLLGVGLLygatgTLNMADLAARLAELDPGLLLAAFALLLVGFGIKAALFPLHFWLPDAYpAAPSPVSA 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 246 LLhSSTMVVAGVFLLIRTSDLLYSSETAT---TICLFLGAITSLLAATCALAQNDLKKIIAYSTTSQLGLMMISIGLKQP 322
Cdd:COG0651 242 LL-SGLLTKVGVYAILRVLTLLFGADPALflgTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLGLGTP 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 323 EL---AFMHISTHAFFKAMLFLCAGTIIHNLdNEQDIRKMGGLKKALPITSSCLVIGSLALSGMPFMAGFYSKDAIIESI 399
Cdd:COG0651 321 LGlagALFHLLNHALAKALLFLAAGAIERAT-GTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAA 399
|
410 420 430
....*....|....*....|....*....|..
gi 187250407 400 NTSNvNSLSLAMTLMATILTTFYSLRMIYYVA 431
Cdd:COG0651 400 LEAG-AWLLAAVLLLSSLLTLAYFVRIFGRAQ 430
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
77-436 |
1.46e-49 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 184.66 E-value: 1.46e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 77 IQVTLTLDSYSTFFMPILLFVVWSIMDFTVQYMKPDLKVSIFFSYLITFTMMMMILVTAENMFQFFIGWEGVGIMSFMLI 156
Cdd:TIGR00940 67 LNFTLYMDGLALLFSLLITGIGVLVVLYSIYYLSKEEPLPNFYAYLLAFMGAMLGVVLSDNLILLYVFWELTSIVSFLLI 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 157 NWWSFRSSSNKAAMQAVVYNRLADIGLIITMAWMVINNTSLSIKGVQAPPDLAL-----IPALGLVLAAA-GKSAQFGFH 230
Cdd:TIGR00940 147 SYWHHRAHSRYGAQKSLTITVFGGLAMLGGLILLGKITGSFSIDAVIASADAIRnsplfGTAMVLVLLGAfTKSAQFPFH 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 231 PWLPAAMEGPTPVSALLHSSTMVVAGVFLLIRTSDLLYSSETATTICLFLGAITSLLAATCALAQNDLKKIIAYSTTSQL 310
Cdd:TIGR00940 227 IWLPDAMEAPTPVSAYLHSATMVKAGLYLLARFTPVFAGTEAWFWIVGLAGLITLLWGSYFAIFQQDLKGILAFSTISQL 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 311 GLMMISIGLKQPEL----------------AFMHISTHAFFKAMLFLCAGTIIHNlDNEQDIRKMGGLKKALPITSSCLV 374
Cdd:TIGR00940 307 GLIMVLLGLGSPSYhyqgddskiyalaavaAVFHLINHATFKGSLFMAAGIIDHE-TGTRDIRKLGGLFHIMPITFTLAM 385
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 187250407 375 IGSLALSGMPFMAGFYSKDAII-ESINTSNVNSLSLA--------MTLMATILTTFYSLRMIYYVALNTPR 436
Cdd:TIGR00940 386 IASAAMAGVPPFNGFLSKEMFFaEAITAHLVNPFDTVtlgylfpyVATVASVFTFVYSLRFIHGVFFGRPK 456
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
72-427 |
1.52e-48 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 181.49 E-value: 1.52e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 72 MGTTTIQVTLTLDSYSTFFMPILLFVVWSIMDFTVQYM-KPDLKVSIFFSYLITFTMMMMILVTAENMFQFFIGWEGVGI 150
Cdd:PRK12646 65 MKTLDINLDLRLDGLSLMFSLIISLIGIAVFFYATQYLsSRKDNLPRFYFYLTLFMFSMIGIVLSDNTILMYVFWELTSV 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 151 MSFMLINWWSFRSSSNKAAMQA---VVYNRLAD-IGLIITMAWMVINNTSLSIKGVQAPPDLAL-IPA-LGLVLAAAGKS 224
Cdd:PRK12646 145 SSFLLISYWYNNGDSQFGAIQSfmiTVFGGLALlVGFIMLYIMTGTNNITEILGQADHIKNHGLfIPMiFMFLLGAFTKS 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 225 AQFGFHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIRTSDLLYSSETATTICLFLGAITSLLAATCALAQNDLKKIIAY 304
Cdd:PRK12646 225 AQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAY 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 305 STTSQLGLMMISIGL-------KQPELA----------FMHISTHAFFKAMLFLCAGTIIHNlDNEQDIRKMGGLKKALP 367
Cdd:PRK12646 305 STISQLGMIMAMVGIgggyaqhQQDAIAsiyvfvlfaaLFHLMNHAIFKCALFMGVGIIDHE-AGTRDIRILSGMRQLFP 383
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 187250407 368 ITSSCLVIGSLALSGMPFMAGFYSKDAIIES-INTSNVNSLSLAMT-------LMATILTTFYSLRMI 427
Cdd:PRK12646 384 KMNLVMTIAALSMAGVPFLNGFLSKEMFLDAlTQTGQLSQFSLISMiiivfigVIASIFTFTYALYMV 451
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
81-444 |
9.57e-46 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 169.71 E-value: 9.57e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 81 LTLDSYSTFFMPILLFVVWSIMDFTVQYMKPDLKVSIFFSYLITFTMMMMILVTAENMFQFFIGWEGVGIMSFMLINWWS 160
Cdd:MTH00095 41 FNFYFNSLLFSLILLLVTLSVLVFSSYYMNGELNFNYFYFVLLIFVGSMFMLNFSNSVFTMLLSWDLLGISSFFLVLFYN 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 161 fRSSSNKAAMQAVVYNRLADIGLIITMAWMVINNT---SLSIKGVQAppdlalipALGLVLAAAGKSAQFGFHPWLPAAM 237
Cdd:MTH00095 121 -NWDSNSGAMNTALTNRIGDFFIFLFFSGFIFSSYyffSFSFFSSSM--------ILMLLLTSFTKSAQFPFSSWLPKAM 191
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 238 EGPTPVSALLHSSTMVVAGVFLLIRTSDLLYSSeTATTICLFLGAITSLLAATCALAQNDLKKIIAYSTTSQLGLMMISI 317
Cdd:MTH00095 192 SAPTPVSSLVHSSTLVTAGLILLMNFSYLILNM-NVMKIMLLIGLFTMFFSSLSALVEEDMKKVVALSTLSQMGFSMLTF 270
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 318 GLKQPELAFMHISTHAFFKAMLFLCAGTIIHNLDNEQDIRKMGGLKKALPITSSCLVIGSLALSGMPFMAGFYSKDAIIE 397
Cdd:MTH00095 271 GSGLSFVSFIHLLSHALFKSCLFMQVGYLIHSNFGQQDGRNYSNNGNLPMFIQLQLLVTLFCLCGLMFTSGMVSKELILE 350
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 187250407 398 SINTSNVNSLSLAMTLMATILTTFYSLRMIYYVALNTPRILPLSSIS 444
Cdd:MTH00095 351 LFFFNNYMIFFSLMFFFSVFLTFGYSYRLWKSFFLSFSKVVNVYSSS 397
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
118-430 |
4.32e-45 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 171.65 E-value: 4.32e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 118 FFSYLITFTMMMMILVTAENMFQFFIGWEGVGIMSFMLINWWSFRSSSNKAA---MQAVVYNRLADIGLIITMAWMVinn 194
Cdd:PRK12645 112 FYVYLLLFMGAMLGVVLSDNLIVLYLFWELTSISSFLLISYWYEREASRYGAqksMLITVFGGLSMLGGFILLYIMT--- 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 195 TSLSIKGVQAPPDLA-----LIPALGLVLAAA-GKSAQFGFHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIRTSDLLY 268
Cdd:PRK12645 189 GSFSIREMIANADEIqnsplFIPAMILILLGAfTKSAQFPFYIWLPDAMEAPTPVSAYLHSATMVKAGIYLVARFTPIFA 268
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 269 SSETATTICLFLGAITSLLAATCALAQNDLKKIIAYSTTSQLGLMMISIGLKQPEL----------------AFMHISTH 332
Cdd:PRK12645 269 GSQVWFWTVTLVGLITLFWGSLNAVKQTDLKGILAFSTVSQLGLIMSLLGIGAASLhyqgddskiyaaaitaAIFHLINH 348
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 333 AFFKAMLFLCAGTIIHNLdNEQDIRKMGGLKKALPITSSCLVIGSLALSGMPFMAGFYSKDAIIES-INTSNVNSLSLA- 410
Cdd:PRK12645 349 ATFKGSLFMIVGIVDHET-GTRDIRKLGGLMTIMPITFTIALIGALSMAGLPPFNGFLSKEMFFESmLNATEANLFSLDt 427
|
330 340
....*....|....*....|....*..
gi 187250407 411 -------MTLMATILTTFYSLRMIYYV 430
Cdd:PRK12645 428 wgvlfpvIAWVASVFTFVYSIIFIFKT 454
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
118-417 |
5.40e-44 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 163.99 E-value: 5.40e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 118 FFSYLITFTMMMMILVTAENMFQFFIGWEGVGIMSFMLINWWSfRSSSNKAAMQAVVYNRLADIGLIITMAWMVINNTSL 197
Cdd:PRK06525 115 YYAFLLLFIGAMAGLVYSSTLLGLLLFFEITGLCSWALISYYQ-SPKALRSALKALLITHIGSLGLYLAAATLFLQTGTF 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 198 SIKGVQA-PPDLALIPALGLVLAAAGKSAQFGFHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIRTsdLLYSS---ETA 273
Cdd:PRK06525 194 ALSALSGlHGSLKYLVFLGILFAAWGKSAQLPFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARA--IQSMGpipHVI 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 274 TTICLFLGAITSLLAATCALAQNDLKKIIAYSTTSQLGLMM--ISIGLKQPELAF----MHISTHAFFKAMLFLCAGTII 347
Cdd:PRK06525 272 GYVGAVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQLGYMFfgLSLAILGSRLALegsiAYIFNHAFAKSLFFLVAGALS 351
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 187250407 348 HNLdNEQDIRKMGGLKKALPITSSCLVIGSLALSGMPFMAGFYSKDAIIES-INTSNVNSLSLAMTLMATI 417
Cdd:PRK06525 352 YSC-GTRLLPRLRGVLKKLPLVGVGFCVAALAITGVPPFNGFFSKFPIFAAgFELSVEYWILLPAMVLLLI 421
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
101-398 |
5.40e-43 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 165.39 E-value: 5.40e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 101 IMDFTVQYMKPDLKVSIFFSYLITFTMMMMILVTAENMFQFFIGWEGVGIMSFMLINWWSFRSSSNKAAMQAVVYNrlAD 180
Cdd:PRK12649 96 IMSYSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLFIFWELTSITSFMLIGYWRHRPESVYGATKSLLIT--AG 173
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 181 IGLIITMAWMVINNT--SLSIKGVQAPP---------DLALIPALGLVLAAAGKSAQFGFHPWLPAAMEGPTPVSALLHS 249
Cdd:PRK12649 174 GGLFMFAGFLLLHVItgTYDIATILQDSelienikghPLFLITLILIFIGAAAKSAQGPFYIWLPNAMEAPTPVSAFLHS 253
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 250 STMVVAGVFLLIRTSDLLYSSETATTICLFLGAITSLLAATCALAQNDLKKIIAYSTTSQLGLMMISIGL---KQPELAF 326
Cdd:PRK12649 254 ATMVKAGVYLVARIHPIFSGTEAWFILVSGTGMITMVLAGFLAFRQTDIKAILAYSTISQLAYLMTMYGYttyHEPGLGV 333
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 187250407 327 ----MHISTHAFFKAMLFLCAGTIIHNLDNeQDIRKMGGLKKALPITSSCLVIGSLALSGMPFMAGFYSKDAIIES 398
Cdd:PRK12649 334 aaatFHLLNHATFKACLFLVAGIVAHEAAT-RDIRKLGGLRKEMPITFIVASIAALAMAGIPPLNGFLSKEMFYET 408
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
104-391 |
1.03e-36 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 145.05 E-value: 1.03e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 104 FTVQYMKPDLKVSIFFSYLITFTMMMMILVTAENMFQFFIGWEGVGIMSFMLINWWSFRSSSNKAAMQAVVYNRLADigL 183
Cdd:PRK07390 108 YALGYLEKDWGLARFFALLGFFEAAMSGLALSDSLFFSYVLLEILTLSTYLLVGFWYAQPLVVTAARDAFLTKRVGD--L 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 184 IITMAWMVI-------NNTSLSIKGVQAPPDLALIPALGLVLAA--AGKSAQFGFHPWLPAAMEGPTPVSaLLHSSTMVV 254
Cdd:PRK07390 186 LLLMGVVALsplagtlNFSDLAAWAATANLDPLTATLLGLALIAgpTGKCAQFPLHLWLDEAMEGPNPAS-ILRNSVVVA 264
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 255 AGVFLLIRTSDLLYSSETATTICLFLGAITSLLAATCALAQNDLKKIIAYSTTSQLGLMMISIGLKQPELAFMHISTHAF 334
Cdd:PRK07390 265 TGAWVLIKLQPVLALSPVALTVLIVIGTVTAIGASLVAIAQIDIKRALSYSTSAYLGLVFIAVGLQQPDIALLLLLTHAI 344
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 187250407 335 FKAMLFLCAGTIIHNlDNEQDIRKMGGLKKALPITSSCLVIGSLALSGMPFMAGFYS 391
Cdd:PRK07390 345 AKALLFMSVGSIILT-TITQDLTELGGLWSRMPATTLAFLVGSAGLVALLPLGGFWA 400
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
13-491 |
9.19e-35 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 137.70 E-value: 9.19e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 13 MLPLFILALPTLTPTSKLIPHPSTNvLAAKLAFFTSLFPLAHFIHTGMTTTTCETQLLTMGT--TTIQVTLTLDSYSTFF 90
Cdd:PRK08375 4 HLLPLLVAVPLLAAALIVLLPKRRR-LRWALALLVAALTFALAISLLPQVLDGGVIAYVVGGwpPGIGIELRADSLSALF 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 91 MpILLFVVWSIMDFTVQYMKPDLKVSIFFSYLITFTMMMMILVTAeNMFQFFIGWEGVGIMSFMLI----NWWSFRsssn 166
Cdd:PRK08375 83 L-LVTSILAIAALLYAIGYGEHRQTRFYALFLLLLAGLLGALLTA-DLFNLFVFLEIMSLSSYALVamggDRRALA---- 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 167 kAAMQAVVYNRLADIGLIITMA--WMVINNTSLSIKGVQAPPDLALIPALGLVLAA-AGKSAQFGFHPWLPAAMEGPTPV 243
Cdd:PRK08375 157 -AARKYLIVGLIGSTFLLIGVGllYGVTGTLNMADLAGALAENPTVVTAFGFVLLAlALKAAVFPLHTWLPRAYPAAPPV 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 244 SALLHSSTMVVAGVFLLIRTSDLLY-----SSETATTICLFLGAITSLLAATCALAQNDLKKIIAYSTTSQLGLMMISIG 318
Cdd:PRK08375 236 VTALLSGLVTKVAVYALIRIYFTVFggdfrFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQMGYILLGLA 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 319 LKQPEL---AFMHISTHAFFKAMLFLCAGTIIHNLdNEQDIRKMGGLKKALPITSSCLVIGSLALSGMPFMAGFYSKDAI 395
Cdd:PRK08375 316 LLTPLAlaaGLLHLLHHALMKGALFLAAGAIEVTY-GTRRLSELSGLGRRMPLTAAAFAVASLSLIGVPPTSGFVSKWYL 394
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 396 IESINTSNVNSLSLAMtLMATILTTFYSLRMIYYVALNTPrilplSSISENPQTTNPILRLAVGSIAAGLLISSTILPTN 475
Cdd:PRK08375 395 VVGAVEAGQWLVLAVL-LASSLLALLYFLRIWYRAFFGPP-----PPGSEAPKQEAPLGMLAPSLALALLSLLLGIYAGP 468
|
490
....*....|....*.
gi 187250407 476 IPQLTMPASAKLAALG 491
Cdd:PRK08375 469 LLQLADAAAAGLLGTS 484
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
206-467 |
3.16e-33 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 133.94 E-value: 3.16e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 206 PDLALIPALGLVLAAAG-KSAQFGFHPWLPAAM-EGPTPVSALLhSSTMVVAGVFLLIRTSDLLYSSETATT-------- 275
Cdd:PRK12667 218 PPLALGVALALALWAFTiKAAIFPNHFWLPDAHpAAPSPVSAML-SGLVVNVGAYAIIRFLYTIFGISPSLIdfraalsp 296
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 276 ICLFLGAITSLLAATCALAQNDLKKIIAYSTTSQLGLMMISIGLKQP---ELAFMHISTHAFFKAMLFLCAGTIIHNLDN 352
Cdd:PRK12667 297 ILIILGAVSAIIGALMMVVQKDVKRLLAYSTISHMGYIFMGIGIGTQlglAAALFHIINHAIAKSLLFLASGVFIHAAGT 376
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 353 eQDIRKMGGLKKALPITSSCLVIGSLALSGMPFMAGFYSKDAIIESINTSNVNSLSLAMtLMATILTTFYSLRMIYYVAL 432
Cdd:PRK12667 377 -RDIDELAGLGRKMPIASFAFLIGALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVL-LIASAISLVGYFRAWYSLFF 454
|
250 260 270
....*....|....*....|....*....|....*
gi 187250407 433 NTPRILPLSSISENPQTTNPILRLAVGSIAAGLLI 467
Cdd:PRK12667 455 GKPKSGEEVEHKESPSMSVVILVLALAVLILGILA 489
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
7-421 |
3.92e-32 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 131.78 E-value: 3.92e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 7 LTMTLFMLPLFILALPTLTPTskLIPHPSTNVLAAKLAFFTSLFPLAHFIHTGMTTTTCETQLLTMGTTTIQVTLTLDSY 86
Cdd:PRK08667 1 MLAGLFLGAILLLLAAAVIPL--VFRHKRKRVWQSVLWLVIAIALLLFAGSLQLFTGNPLDIPLWGIAPGLDITFHIDRL 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 87 STFFMPILLFVVWSIMDFTVQY---MKPDLKVSIFFSYLITFTMMMMILVTAENMFQFFIGWEGVGIMSFMLINWWSFRS 163
Cdd:PRK08667 79 AAFFIILIGLVSLCVAIYSLGYnehMSSNERANLLSALTALFILSMLGVVASANTFSFLFFWEIMALSSFFLVMNDYQEE 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 164 SSNKAAMQAVVYNRLADIGLIITMAWMVINNTSLSIKGVQAPPDLALIPALGLVLAAAGKSAQFGFHPWLPAAMEG-PTP 242
Cdd:PRK08667 159 ETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPLGASAGILSLVFLLLFLGFGIKAGIIPFHKWLPYAHPAsPSN 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 243 VSALLhSSTMVVAGVFLLIRTSDLLYSSETA-TTICLFLGAITSLLAATCALAQNDLKKIIAYSTTSQLGLMMISIGL-- 319
Cdd:PRK08667 239 VSALM-SGVMLKVAVYGLVRFLMDVLSPELWwGVLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGIILMGIGLyv 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 320 -----KQPELAFM-------HISTHAFFKAMLFLCAGTIIHNLdNEQDIRKMGGLKKALPITSSCLVIGSLALSGMPFMA 387
Cdd:PRK08667 318 ifgvyGLDTLALLalggalfHSLNHALFKSLLFLTAGSVVHAT-GTRNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFN 396
|
410 420 430
....*....|....*....|....*....|....
gi 187250407 388 GFYSKDAIIESINTSNVNSLSLAMTLMATILTTF 421
Cdd:PRK08667 397 GFASELLLYESFFQSFSVADPLIKILLFSVLAIF 430
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
87-427 |
1.62e-30 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 125.19 E-value: 1.62e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 87 STFFMPILLFVVWSIMDftvqymkpdLKVSIFFSYLITFTMMMMILVTAENMFQFFIGWEGVGIMSFMLINWWSfRSSSN 166
Cdd:COG1008 91 TALLTPLAILASWNEIK---------KRPKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIWG-GERRI 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 167 KAAMQAVVYNRLADIGLIITMAWMVINNTSLS-----IKGVQAPPDLALIPALGLVLAAAGKSAQFGFHPWLP-AAMEGP 240
Cdd:COG1008 161 YAAIKFFLYTLAGSLLMLVAILALYFLAGALTfdiaeLAAAPLPLTAQLLLFLAFFIAFAVKVPMFPFHTWLPdAHVEAP 240
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 241 TPVSALLhSSTMVVAGVFLLIRTSDLLY--SSETATTICLFLGAITSLLAATCALAQNDLKKIIAYSTTSQLGLMMISIG 318
Cdd:COG1008 241 TAGSVLL-AGVLLKMGGYGLLRFALPLFpeASAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMGFVLLGIF 319
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 319 LKQPEL---AFMHISTHAFFKAMLFLCAGTIIHNLdNEQDIRKMGGLKKALPITSSCLVIGSLALSGMPFMAGFYSKDAI 395
Cdd:COG1008 320 ALNPLGlqgAVLQMVSHGLITAALFLLVGVLYDRT-HTRDIADLGGLAKRMPVLAALFLLAALASLGLPGTSGFVGEFLV 398
|
330 340 350
....*....|....*....|....*....|..
gi 187250407 396 IESINTSNVNSLSLAMTlmATILTTFYSLRMI 427
Cdd:COG1008 399 LLGAFQVNPWLAILAAL--GLILTAAYLLWMY 428
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
14-420 |
1.91e-30 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 125.59 E-value: 1.91e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 14 LPLFILALPTL----TPTSKLIPHPSTNVLAAKLAFFTSLFPLAHFIHTGM---------TTTTCETQLLTMGTTTIQVT 80
Cdd:PRK08376 6 LPPLLIIIPLFgafsMPIVSLLGGKAREIWAVLISFLTLIVALLVFYEVWNngtivyvlgAESPTLTLPFGSGGFPIRII 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 81 LTLDSYSTFFMPILLFVVWSIMDFTVQYMKPDLKVSIFFSYLITFTMMMMILVTAENMFQFFIGWEGVGIMSFMLINWWS 160
Cdd:PRK08376 86 WEVDLFGAFMALIATIVSFLAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFRN 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 161 FRSSSNKAAMQAVVYNRLADIGLIITMAWM-----VINNTSLSIKGVQAPPDLALIpALGLVLAA-AGKSAQFGFHPWLP 234
Cdd:PRK08376 166 DTWEAIEAGIKYMFVGSLASSMVLLGIALLygqygTLNMAYLAVKMSENPTVVAKI-ALALFIAGlAMKSGAVPVHMWLP 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 235 AAM-EGPTPVSALLHSSTmvVAGVFLLIRTSDLLY----SSETATTICLFLGAITSLLAATCALAQNDLKKIIAYSTTSQ 309
Cdd:PRK08376 245 DAYpAAPSSISAMLLVIK--QAGLYALARVLFSIYgpaiNLATVGWVIIILGCLTMFVGVAMAVVQKDVKRLLAYHSVSQ 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 310 LGLMMISIG-----LKQPEL----------AFMHISTHAFFKAMLFLCAGTIIHNLdNEQDIRKMGGLKKALPITSSCLV 374
Cdd:PRK08376 323 IGYMLLGLGvglaaLGDPAMasygeialagGIYHIVNHALYKALLFLTAGAVIYET-GTRNLNELGGLARTMPKTTIAFL 401
|
410 420 430 440
....*....|....*....|....*....|....*....|....*.
gi 187250407 375 IGSLALSGMPFMAGFYSKDAIIESinTSNVNSLSLAMTLMATILTT 420
Cdd:PRK08376 402 IGAAAIVGLPPFNGFASKWLIYES--SALFNPILGVIAMIGSVLTL 445
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
77-500 |
2.09e-28 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 118.90 E-value: 2.09e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 77 IQVTLTLDSYSTFFMpILLFVVWSIMDFtvqYMKPDLKVSIFFSYLITFTMMMMILVTAENMFQFFIGWEGVGIMSFMLI 156
Cdd:PRK07234 59 FGVTLRADALSGYFI-LTNALVTLAVIF---YCWESAKTRFFYAQLLILHGSVNAAFVCADLISLYVALEVLSIATFLLV 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 157 NWwsfrSSSNKAAMQAVVYNRLADIGLIITMAWMVI---NNTSLSIKGV-QAPPD-LALIpALGLVLaaagKSAQFGFHP 231
Cdd:PRK07234 135 AY----PRTDRAIWVGLRYLFYSNVAMLFYLIGAVLvyqANGTFAFSGLaTADPEaFALI-ALGLLV----KGGIFVSGL 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 232 WLPAAMEGPTPVSALLHSSTMVVAGVFLLIRTSDLLYSSETATTIclfLGAITSLLAATCALAQNDLKKIIAYSTTSQLG 311
Cdd:PRK07234 206 WLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVPGLDLIVRI---FGVGTALLGVLFALLEKDLKRMLAFSTISQLG 282
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 312 LMMISiglkqPELA-FMHIsTHAFFKAMLFLCAGtIIHNLDNEQDIRKMGGLKKALPitsscLVIGSLALSGMPFMAGFY 390
Cdd:PRK07234 283 FILAA-----PLVGgLYAL-AHGLVKSTLFLCAG-ALPSRNFTELISQMLGIGKWIP-----LTMASFSIAGFPLLAGFV 350
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 391 SKDAIIesintSNVNSLSLAMTLMATILTTFYSLRMIYyvalnTPRILPLSSISENPQTTNPILRLAVGSIAAGLLISST 470
Cdd:PRK07234 351 SKVLTL-----KNLLPWQAIALNLAAVGTAASFWKFIF-----LPFSADDEDKKPLPGFWNAIALLLGGLFLANGVYTEA 420
|
410 420 430
....*....|....*....|....*....|
gi 187250407 471 ILPTNIpqltmpasakLAALGILMLGLLVG 500
Cdd:PRK07234 421 YTLGNI----------LKALLTIGLGWLPY 440
|
|
| ND5 |
MTH00063 |
NADH dehydrogenase subunit 5; Provisional |
69-425 |
2.42e-28 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214414 [Multi-domain] Cd Length: 522 Bit Score: 119.21 E-value: 2.42e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 69 LLTMGTTTIQVTLTLDSYSTFFMPILLFVVWSIMDFTVQYMKPDLKVSIFFSYLITFTMMMMILVTAENMFQFFIGWEGV 148
Cdd:MTH00063 29 FLSFGGYSWLINFDFDYVTFGVLLMLLICFYYSLLYTFHYFGGSYASFLLNKLIVLFVLVMGILVLTGDFLSTLIFWEYL 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 149 GIMSFMLI----NWWSFRSSsnkaaMQAVVYNRLADIGLIITMAWMVINNTSLSIKGvqappdlalipaLGLVLAAAGKS 224
Cdd:MTH00063 109 GVVSFFLIlfydNFLSLRAS-----VVTLVSSRFGDVCLFLLIGLSCWGGSGSFLCC------------LFFFLIVFTKS 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 225 AQFGFHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIRTSDLLYSSeTATTICLFLGAITSLLAATCALAQNDLKKIIAY 304
Cdd:MTH00063 172 ASFPFISWLLEAMRAPTPVSSLVHSSTLVAAGVWFVMRYDYLLGFS-WLSIFFSVLLLLTIFITGVSSLFFSDLKKIVAL 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 305 STTSQLG---LMMIsigLKQPELAFMHISTHAFFKAMLFLCAGTIIHNLDNEQDIR-----KMGGLKkaLPITSSCLVIG 376
Cdd:MTH00063 251 STCNNISwcvLYLI---YGDVILSLFQLVSHGVSKCLLFMLVGDVMSGSGGSQSSNcvyssILYGSW--NLFYLFLLVLG 325
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 187250407 377 slaLSGMPFMAGFYSKDAIIESINTSNVNSLSLAMTLMATILTTFYSLR 425
Cdd:MTH00063 326 ---LSGVPFIGVFFSKHFLLSSFSSVVFNVSLLLVVILCVFLSYLYSFR 371
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
129-392 |
3.17e-28 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 119.99 E-value: 3.17e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 129 MMILVTAENMFQFFIGWEGVGIMSFMLINWWSFRSSSNKAAMQAVVYNRLADIGLIITMAWMVINNTSLSIKGVQAPPDL 208
Cdd:PRK06521 126 MVLVLLADDAFSFLVAWETMSLSSWFLVIANHREAEIRRAGFLYLLMAHAGALAILLAFGLLARESGSYDFAAMRAAHLS 205
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 209 ALIPALGLVLAAAGKSAQFGF---HPWLPAAM-EGPTPVSALLhSSTMVVAGVFLLIRTS-DLLYSSETAT-TICLFLGA 282
Cdd:PRK06521 206 PFWASLVFLLALFGFGAKAGLvplHVWLPRAHpAAPSHVSALM-SGVMLKVAIYGILRVVfDLLGAPGWWWgVLVLALGA 284
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 283 ITSLLAATCALAQNDLKKIIAYSTTSQLGLMMISIGL-------KQPELA-------FMHISTHAFFKAMLFLCAGTIIH 348
Cdd:PRK06521 285 ISAVLGVLYALAEHDLKRLLAYSTIENIGIIFVGLGLamvfiayGMPLLAalaltaaLYHLLNHALFKSLLFLGAGAVLH 364
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 187250407 349 NLdNEQDIRKMGGLKKALPITSSCLVIGSLALSGMPFMAGFYSK 392
Cdd:PRK06521 365 AT-GTRDMEKLGGLIRRMPWTAWAFLIGCLAISALPPLNGFVSE 407
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
6-347 |
1.81e-27 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 116.72 E-value: 1.81e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 6 MLTMTLFMLPLFI---LALPTLTPTSKLIPHPSTNVLAAKLAFFTSLFPLAHFIHTGMTTTTCETQLLTMGtttiQVTLT 82
Cdd:PRK08168 1 VLLSVCALLPAVLmslAAGGLLLSRWLTRALWRIAQAASLAGLFLALLGLVLFATGAAWPAAAWLEVSGLG----LVMAA 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 83 LDSystffmpillFVVWSIMDFTVQYMKPDLKVSIFFSYLITFTMMMMILVTAENMFQFFIGWEGVGIMSFMLINWWSFR 162
Cdd:PRK08168 77 LVQ----------LLGWVIGRFSHRYLQGEPGQRRYVRALAGVLAAVHLLVLSDHLLVLIAAWAAISLALHRLLCFYPDR 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 163 SSSNKAAMQAVVYNRLADIGLI--ITMAWMVINNTSLSIKGVQAPPDLALIP----ALGLVLAAAGKSAQFGFHPWLPAA 236
Cdd:PRK08168 147 PFARLAAHKKFIADRLAELLLLaaAALAYLEVGSLSLSALWAHLAAQGASPSlqaaALLLVLAVILKTAQLPVHGWLIQV 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 237 MEGPTPVSALLHSSTMVVAGvFLLIRTSDLLYSSETATTICLFLGAITSLLAATCALAQNDLKKIIAYSTTSQLGLMMIS 316
Cdd:PRK08168 227 MEAPTPVSALLHAGVVNLGG-FVLIRFAPLLEQAPPARWLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGFMLLE 305
|
330 340 350
....*....|....*....|....*....|.
gi 187250407 317 IGLKQPELAFMHISTHAFFKAMLFLCAGTII 347
Cdd:PRK08168 306 CGLGLYELALLHLVAHSLYKAHAFLSASEAV 336
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
70-432 |
4.99e-27 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 115.86 E-value: 4.99e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 70 LTMGTTTIQVTLTLDSYSTFFMPILLFVVWSIMDFTVQY-MKPDlkvsiffSYLITFTMMMMILV----TAENMFQFFIG 144
Cdd:PRK08668 54 LTLFFGGFKLTFTLTHLSWFFAMISLLVIFSVAFFMVSEkTKND-------AYFNMFALMSLAGVlgvfLANDLLTLYIF 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 145 WEGVGIMSFMLInwwSFRSSSNKAAmqAVVYNRLADIG-LIITMAWMVINNT--SLSIKGVQA------PPDLALIPALG 215
Cdd:PRK08668 127 WEIMTFSSFMMV---PMGKKESRKA--SLKYFVLSAIGaYAMLYAIFLIYAKtgTFDFADISQglindtSTGFALIVFLF 201
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 216 LVLAAAGKSAQFGFHPWLPAAM-EGPTPVSALLhSSTMVVAGVFLLIRTSDLLYSSETATT------------ICLFLGA 282
Cdd:PRK08668 202 LLAFGVAKAGIFPLHVWAPDAYsEAPQSFSAVL-SGQLSKLGAYGFLLVLYVLPGTKLFSEfgtyrgvplfnyILAWLGN 280
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 283 ITSLLAATCALAQNDLKKIIAYSTTSQLGLMMISIGLKQP---ELAFMHISTHAFFKAMLFLCAGTIIHNlDNEQDIRKM 359
Cdd:PRK08668 281 ISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSlgfAGGLFHVFNHALFKGLFFLIFAAVIYR-TGTTKISEM 359
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 187250407 360 GGLKKALPITSSCLVIGSLALSGMPFMAGFYSKDAIIESINTSNVnSLSLAMTLMATILTTFYSLRMIYYVAL 432
Cdd:PRK08668 360 GGLIEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGM-PITAFMAFFGSIGSFLYVFRPLAGVFL 431
|
|
| NADH5_C |
pfam06455 |
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of ... |
422-588 |
4.62e-25 |
|
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of several NADH dehydrogenase subunit 5 proteins and is found in conjunction with pfam00361 and pfam00662.
Pssm-ID: 368917 [Multi-domain] Cd Length: 181 Bit Score: 102.24 E-value: 4.62e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 422 YSLRMIYYVALNTPRILPLSSISEN-PQTTNPILRLAVGSIAAGLLISSTILPTNiPQLTMPASAKLAALGILMLGLLVG 500
Cdd:pfam06455 1 YSFRLIYYVMTGSPRFSSLSPINENnPIMINPIKRLAIGSIIGGSLLSWLIFPKP-PMMTMPLYLKLLALLVTILGLLLG 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 501 SALVMMANQLPTSIKGSQTPLLFKIMHFY-FILHHTLPTAILQISQKLLTHLmDQTHYEALGPKAATYLQMLMSKILTNF 579
Cdd:pfam06455 80 LELSNLSNKQLKKSLNFNLHSFSGSMWFFpNLSHRLIPKLSLKLGQKLAKQI-DQGWSEKFGPQGIAKTLMTLSKIIQNS 158
|
....*....
gi 187250407 580 HKARINPYL 588
Cdd:pfam06455 159 QKGLIKIYL 167
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
79-428 |
1.44e-24 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 107.59 E-value: 1.44e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 79 VTLTLDSYSTFFMPILLFVVWSIMDFTVQYMK---PDLKVSIFFSYLITFTMMMMILVTAeNMFQFFIGWEGVGIMSFML 155
Cdd:PRK06589 77 IGLHLEPLGLIFLLLIGFLWICALLYTPKYLAinnIDSSSRFLFFFNLTILIGVLIALSS-DLFTMFVCYELLTISTAFL 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 156 INWwsfrsSSNKAAMQAVVY--NRLADIGLIITMAWMVINNTSLSIKGVQAPPDLALIPALGLVLA---AAGKSAQFGFH 230
Cdd:PRK06589 156 IGH-----TRNNISLSGGYKylKILMISALLLFLPAVILIYTKTGNLDFVSGGLFSKNQSIILLLMfiyGIAKTAIFPVH 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 231 PWLPAAMEGPTPVSALLHSSTMVVAGVFLLIRTSDLLYSSETATTI------CLFLGAITSLLAATCALAQNDLKKIIAY 304
Cdd:PRK06589 231 SWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYIFGLSYLQRIfaefnwLIFIPIVSIFYSSLKALKTDNIKKILAY 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 305 STTSQLGLMMISIGLKQPE---LAFMHISTHAFFKAMLFLCAGTIIhNLDNEQDIRKMGGLKKALPITSSCLVIGSLALS 381
Cdd:PRK06589 311 STISQLSLALLSAFILTPKalgAAILHLVSHSFAKICLFYSMGSIY-SLKKEDQVDKLHGTSKSFPLISFIISISSLSLI 389
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 187250407 382 GMPFMAGFYSKDAIIESINTSNVNSLSLAMTLM---ATILTTFYSLRMIY 428
Cdd:PRK06589 390 GIPIFSGFISKFLILLAASEQNQPWLSIIVMLVviaSSILSALYLLKILS 439
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
80-467 |
3.42e-23 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 102.89 E-value: 3.42e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 80 TLTLDSYSTFFMPILLFVVWSIMDFTVQYMKPDLKVSIFFSYLITFTMM-MMILVTAENMFQFFIGWEGVGIMSFMLINW 158
Cdd:COG1007 65 MFVVDGFALFFKLLILLAALLVLLLSRDYLERRGLLRGEFYALLLFATLgMMLMASANDLLTLFLGLELLSLSLYVLVAF 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 159 WSFRSSSNKAAMQAVVYNRLADIGLIITMAWMVINNTSLSIKGVQA------PPDLALIPALGLVLAAAG-KSAQFGFHP 231
Cdd:COG1007 145 RRDDRRSSEAALKYFLLGALSSGFLLYGISLLYGATGSLNLAGIAAalaaggANSPLLLLGLVLVLAGLAfKLSAVPFHM 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 232 WLPAAMEG-PTPVSALLhSSTMVVAGVFLLIRtsdLLYS-----SETATTICLFLGAITSLLAATCALAQNDLKKIIAYS 305
Cdd:COG1007 225 WTPDVYEGaPTPVTAFL-ATAPKIAAFAALLR---LLVEafpglAADWQLLLAVLAVLSMTVGNLAALAQTNVKRMLAYS 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 306 TTSQLGLMMISIGLKQP---ELAFMHISTHAFFKAMLFLCAGTIIHNLDNEQDIRKMGGLKKALPITSSCLVIGSLALSG 382
Cdd:COG1007 301 SIAHAGYLLLGLAAGTPlgvSAALFYLLAYLFMNLGAFAVILLLSRKGGEAEEIEDLAGLARRSPLLALAMTIFLLSLAG 380
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 383 MPFMAGFYSKDAIIESINTSNVNSLSLAMtLMATILTTFYSLRMIYYVALNTPRilplssiSENPQTTNPILRLAVGSIA 462
Cdd:COG1007 381 IPPTAGFFGKFYVFSAAVEAGLYWLAVIA-VLNSVISAYYYLRVVKAMYFDEPE-------EEAPISAPPGLRVALVIAA 452
|
....*
gi 187250407 463 AGLLI 467
Cdd:COG1007 453 LLVLL 457
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
87-427 |
3.54e-23 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 103.36 E-value: 3.54e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 87 STFFMPILLFVVWsimdFTVQYMkpdlkVSIFFSYLITFTMMMMILVTAENMFQFFIGWEGVGIMSFMLINWWSfRSSSN 166
Cdd:PRK05846 91 TALLTPLAVLASW----EEIKKR-----VKFYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFLIGVWG-GKNRI 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 167 KAAMQAVVYNRLADIGL---IITMAWMVINNT-SLSI---KGVQAPPDLALIPALGLVLAAAGKSAQFGFHPWLP-AAME 238
Cdd:PRK05846 161 YAATKFFLYTLLGSLLMlvaIIYLVVVYYNATgTFDIadlLNLPLPPGVQYWLFLAFFIAFAVKMPMFPLHTWLPdAHVQ 240
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 239 GPTPVSALLhSSTMVVAGVFLLIRTSDLLY--SSETATTICLFLGAITSLLAATCALAQNDLKKIIAYSTTSQLGLMMIS 316
Cdd:PRK05846 241 APTAGSVLL-AGILLKMGAYGLLRFSLPLFpdASHEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYSSISHMGFVTLG 319
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 317 IG-LKQPELA---FMHIStHAFFKAMLFLCAGTIIHNLDNEqDIRKMGGLKKALPITSSCLVIGSLALSGMPFMAGFYSK 392
Cdd:PRK05846 320 IFaGNQLGIQgaiFQMIS-HGLSSAALFLLVGVLYDRLHTR-DIADYGGLAKVMPVLAAFFLFFAMASLGLPGTSGFVGE 397
|
330 340 350
....*....|....*....|....*....|....*
gi 187250407 393 DAIIesINTSNVNSLSLAMTLMATILTTFYSLRMI 427
Cdd:PRK05846 398 FLIL--LGSFQVNPVIAFIATTGLILAAVYSLWLY 430
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
133-396 |
4.17e-21 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 97.27 E-value: 4.17e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 133 VTAENMFQFFIGWEGVGIMSFMLInWWSFRSSSNKAAMQAVVYNRLADIGLIITMAWMVINNTSLSIKGVQAPPDLALIp 212
Cdd:PRK12668 110 VFAGDLLTLFVFWELMAFTSTFLV-WARGTKAAVRAGFRYLLVHVLGGVLLLAGILLHYAETGSFAFGAIAGLGGTAAW- 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 213 algLVLAAAG-KSAQFGFHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIRtsdlLYSSetaTTICLFLGAITSLLAATC 291
Cdd:PRK12668 188 ---LILIGFGvNAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALAR----AFPG---TELLIYIGAAMAVYGVFF 257
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 292 ALAQNDLKKIIAYSTTSQLGLMMISIGLKQpEL----AFMHISTHAFFKAMLFLCAGTIIHNLdNEQDIRKMGGLKKALP 367
Cdd:PRK12668 258 ALLENDLRRLLSYHIVSQVGYMVAGIGIGT-ALaingAVAHAFNHILYKGLLFMSAGAVLYRT-GTEKLTELGGLYRSMP 335
|
250 260
....*....|....*....|....*....
gi 187250407 368 ITSSCLVIGSLALSGMPFMAGFYSKDAII 396
Cdd:PRK12668 336 LTALFCLVGALSISAFPLFSGFVSKSMII 364
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
206-430 |
3.92e-20 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 94.06 E-value: 3.92e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 206 PDLALIPALGLVLAAAGKSAQFGFHPWLPAAMEG-PTPVSALLhSSTMVVAGVFLLIRTSDLLYSSETATTICLFL---G 281
Cdd:PRK08377 202 PTVAQVGLALLIFGLAVEAELFPLNAWAPDAYQAaPHPITVMF-SAFVVKAGLYAMARILYLMQNANGWSSVLKLViimA 280
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 282 AITSLLAATCALAQNDLKKIIAYSTTSQLGLMMISIGLKQP---ELAFMHISTHAFFKAMLFLCAGTIIHNLDNEQdIRK 358
Cdd:PRK08377 281 TLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTQagvDAGVFHMINHAIVKALLFLAVGYVGITLGGTE-IEK 359
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 187250407 359 MGGLKKALPITSSCLVIGSLALSGMPFMAGFYSKDAIIESiNTSNVNSLSLAMTLMATILTTFYSLRMIYYV 430
Cdd:PRK08377 360 FEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRIILA-GLSAGYTWPVALVLGASVVEAVYYFRLIHTM 430
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
112-426 |
2.26e-18 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 88.55 E-value: 2.26e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 112 DLKVSIFFSYLITFTMMMMILVTAENMFQFFIGWEGVGIMSFMLINWWSfRSSSNKAAMQAVVYNRLADIGLIIT---MA 188
Cdd:PRK12561 83 TRKPRLFYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLLISIWG-GQKRLYAATKFILYTALASIFILVAglaLA 161
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 189 W----MVINNTSLSIKgvQAPPDLALIPALGLVLAAAGKSAQFGFHPWLPAAM-EGPTPVSallhsstMVVAGVFL---- 259
Cdd:PRK12561 162 LsgdtFTFDLAELGAK--SYPLALELLLYAGFLIAFGVKLPIFPLHTWLPDAHgEASAPVS-------MILAGVLLkmgg 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 260 --LIRTSDLLYSSETAT--TICLFLGAITSLLAATCALAQNDLKKIIAYSTTSQLGLMMISIGlKQPEL----AFMHIST 331
Cdd:PRK12561 233 yaLIRFNVQMLPDAHVYfaPALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVLLGIA-AFTDLgisgAMLQMIS 311
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 332 HAFFKAMLFLCAGtIIHNLDNEQDIRKMGGLKKALPITSSCLVIGSLALSGMPFMAGFYSKDAIIESINTSNVNS----- 406
Cdd:PRK12561 312 HGLIAAALFFLTG-VTYERTHTLSIPNMGGLAKVMPKTFALFTASSMASLALPGMSGFVSELTVFLGITSSDVYSstfrt 390
|
330 340
....*....|....*....|
gi 187250407 407 LSLAMTLMATILTTFYSLRM 426
Cdd:PRK12561 391 ITILLAAVGLILTPIYLLSM 410
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
221-398 |
7.35e-18 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 86.93 E-value: 7.35e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 221 AGKSAQFGFHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIRTSDLLYSSETA--TTICLFLGAITSLLAATCALAQNDL 298
Cdd:PRK07691 220 ATKAGLFPLYFWLPGSYYAPPIAIAALFGALLTKVGVYAIARTFTLFFSHDTSftHYLILILALLTIIFGVIGAVAYFDI 299
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 299 KKIIAYSTTSQLGLMMISIGLKQPEL---AFMHISTHAFFKAMLFLCAGTIIHnLDNEQDIRKMGGLKKALPITSSCLVI 375
Cdd:PRK07691 300 KKIIIYNIMIAVGVILVGVAMMTESGmigAIYYLIHDMIVKAALFLLIGIMIK-ITGTTDLKKMGGLIKRYPVLGWMFFI 378
|
170 180
....*....|....*....|...
gi 187250407 376 GSLALSGMPFMAGFYSKDAIIES 398
Cdd:PRK07691 379 AALSLAGIPPLSGFYGKFFIVEG 401
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
213-466 |
2.08e-17 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 85.39 E-value: 2.08e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 213 ALGLVLAAAGKSAQFGFHpWLPAAMEGPTPVSALLHSSTMVVAGVFLLIRTSDLLYSSETATT--ICLFLGAITSLLAAT 290
Cdd:PRK12663 210 ALLFLLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLFPQERELLhpLLATMAAITMVIGAL 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 291 CALAQNDLKKIIAYSTTSQLGLMMISIGLkqpeLAFMHISTHAFF-------KAMLFLCAGTIIHnLDNEQDIRKMGGLK 363
Cdd:PRK12663 289 GALAYKDIRRIAGYQVISSIGFILLGLAL----GTPAGINGAIFYlvhdmvvKTALFLIAGSLVR-LTGYRSLQYLGGLY 363
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 364 KALPITSSCLVIGSLALSGMPFMAGFYSKDAIIESiNTSNVNSLSLAMTLMATILTTfYSLRMIYYVALNTPRILPLSSI 443
Cdd:PRK12663 364 RKEPLFGALFLILIFAIGGLPPFSGFWGKVLLVQG-ALDNGAYILLALMLITSLITM-YSLFRIFFLAYWGDKDGEEVNF 441
|
250 260
....*....|....*....|....
gi 187250407 444 SE-NPQTTNPILRLAVGSIAAGLL 466
Cdd:PRK12663 442 KPiPLYRKLPLSILAVVVIAMGIA 465
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
192-396 |
8.50e-17 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 83.27 E-value: 8.50e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 192 INNTSLSIKGVQAPPDLALIPALGLVLAAAGKSAQFGFHPWLPAA-MEGPTPVSALLhSSTMVVAGVFLLIRTSDLLYSS 270
Cdd:PRK08676 188 LNWTELAAHASLLSPSVLGASFLFIFIGFLAKSGLVPFHTWLPAAyAKAPSVVSALL-SGTVLNIGIYGILRLSALLRQS 266
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 271 ---ETATTICLFLGAITSLLAATCALAQNDLKKIIAYSTTSQLGLMMISIGLKQPELAF---MHISTHAFFKAMLFLCAG 344
Cdd:PRK08676 267 gaaEQFSNVLIGLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFwmlFHMLAHSLVKSGLFFSAG 346
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 187250407 345 tIIHNLDNEQDIRKMGGLKKALPITSSCLVIGSLALSGMPFMAGFYSKDAII 396
Cdd:PRK08676 347 -ILHRQYRSDRFDRIFDVFRLQPVAAWGVILGSAAIIGMPPFPLFLSKFFIL 397
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
83-347 |
9.98e-16 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 80.08 E-value: 9.98e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 83 LDSYSTFFMPILLFVVWSIMDFTVQYMKPDLKVSIFFSyLITFTMMMMILVTAENMFQFF-IGWegvGIMSFMLINWWSF 161
Cdd:PRK08601 70 LDTLAWLMAFFVLTLGFIIQRFSVRYLLGDRSYRKYFA-LFTFTTGFASLAWLSGDLRLMaLCW---GATLLGLTLLIGL 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 162 RSSSNKAAMQAVVYNRLADIG---LIITMAWMVINNTSLSIKGVQAPPDLALIPA-------LGLVLAAAGKSAQFGFHP 231
Cdd:PRK08601 146 NKGWKVAREAAKISGMLFLISwlaLALAIVWLFIATGEWQLTSVLSNENLAQLGTwektginLLLILAVMIPAAQWPFQR 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 232 WLPAAMEGPTPVSALLHSStMVVAGVFLLIRTSDlLYSSETATTICLFLGAITSLLAATCALAQNDLKKIIAYSTTSQLG 311
Cdd:PRK08601 226 WLIESAVAPTPVSAIMHAG-LVNAGGIMLTRFSP-LFHDDIAQILLLIFASISVLIGTGISLVQVDYKRQLVGSTMAQMG 303
|
250 260 270
....*....|....*....|....*....|....*.
gi 187250407 312 LMMISIGLKQPELAFMHISTHAFFKAMLFLCAGTII 347
Cdd:PRK08601 304 FMLVQCALGAYSAAIIHLILHGLFKATLFLQSGSAV 339
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
135-427 |
2.34e-15 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 78.97 E-value: 2.34e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 135 AENMFQFFIGWEGVGIMSFMLINWWSfRSSSNKAAMQAVVYNRLADIGLIIT---MAWMV-INNTSLSIKGVQAPPDLAL 210
Cdd:PRK06473 126 AQDLLLFFLFYELELIPLYLLIAIWG-GQRRGYAATKFLLYTAISGILILVSflgLVWLSgASSFDYEPLRSHTLPLSTQ 204
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 211 IPALGLVLAAAG-KSAQFGFHPWLP-AAMEGPTPVSALLhsstmvvAGVFLLIRTSDLLY--------SSETATTICLFL 280
Cdd:PRK06473 205 LLLLAPILVGFGiKIPLVPFHTWLPdAHVEASTPVSVLL-------AGVLLKLGTYGLLRfgvglfpeAWVYLAPWLATW 277
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 281 GAITSLLAATCALAQNDLKKIIAYSTTSQLGLMMISIGLKQP---ELAFMHISTHAFFKAMLFLCAGtIIHNLDNEQDIR 357
Cdd:PRK06473 278 AVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYILLAAAAATPlsiLAAVFQMISHGLISALLFLLVG-VVYKKTGSRDVD 356
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 187250407 358 KMGGL---KKALPITSSCLVIGSLALSGMPFMAGFYSKDAIIE-SINTSNVNSLslaMTLMATILTTFYSLRMI 427
Cdd:PRK06473 357 VLRGLlnpERGLPITGSLMILGVMASAGIPGMVGFIAEFLVFRgSFPIFPVQTL---LCMIGTGLTAVYFLLLV 427
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
227-467 |
2.56e-15 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 78.82 E-value: 2.56e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 227 FGFHPWLP-AAMEGPTPVSALLHSSTMVVAgVFLLIRTSDLLYSS---ETATTICLFLGAITSLLAATCALAQNDLKKII 302
Cdd:PRK06458 231 FPMHAWLPdAHSEAPSPVSALLSGVLLNVA-LYAVLRYYILIDAAigsDFPGRLLLIFGLLSVLVAAFFLLRQRDIKRLF 309
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 303 AYSTTSQLGLMMISIGLKQPeLAF----MHISTHAFFKAMLFLCAGTIIHNLDnEQDIRKMGGLKKALPITSSCLVIGSL 378
Cdd:PRK06458 310 AYSSIEHMGLIAFALGIGGP-LGIfaalLHMLNHSLTKSAIFFASGNVLQKYG-TRDINVIRGLLKVSPLTGWGLMLGAL 387
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 379 ALSGMPFMAGFYSKDAIIESinTSNVNSLSLAMTLMATILTTFYSL-RMIYYVALNTPRiLPLSSISENPQTTNPILRLA 457
Cdd:PRK06458 388 AIAGMPPFGVFISEFLILTA--GLARGPLLIAILLLLLLTLAFAALvRRVAGMVFGEPP-EAVNRGDLGWLTTSPMFVHL 464
|
250
....*....|
gi 187250407 458 VGSIAAGLLI 467
Cdd:PRK06458 465 VLVLVLGLYI 474
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
80-466 |
3.54e-15 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 78.32 E-value: 3.54e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 80 TLTLDSYSTFFMPILLFVVWsimdFTVQYMKPDLKVSIFFSYLITFTMM---MMILVTAENMFQFFIGWEGVGIMSFMLI 156
Cdd:PRK05777 68 MLVVDGFALFLKGLILLASL----LALLLARPYLEDRGRGEFYLLVLFAllgMMVMVSANDLLTLFLGLELLSLPLYALA 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 157 NWWSFRSSSNKAAMQAVVYNRLADIGLIITMAWMVINNTSLSIKGVQA------PPDLALIPALGLVLAAAG-KSAQFGF 229
Cdd:PRK05777 144 ALRRDRRRSLEAAIKYFVLGALASGFLLYGMSLLYGATGSLSFAGIAKaladgsGNSLLLLFGLVFLLVGLAfKLSAVPF 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 230 HPWLPAAMEG-PTPVSALLHSSTMVvAGVFLLIRTSDLLYSSETAT--TICLFLGAITSLLAATCALAQNDLKKIIAYST 306
Cdd:PRK05777 224 HMWTPDVYEGaPTPVTAFLATAPKI-AAFAVLLRLLVVAFGGLSEDwqQVLAIIAIASMLVGNLAALSQTNIKRLLAYSS 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 307 TSQLGLMMISIGLKQPE---LAFMHISTHAFFKAMLFLCAGTIIHNLDNEQDIRKMGGLKKALPITSSCLVIGSLALSGM 383
Cdd:PRK05777 303 IAHAGYLLVGLAAGTAEgysAVLFYLLAYLFMTLGAFGVISLLRRKGGEAESISDFAGLSKRSPLLAAVMTIFMLSLAGI 382
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 384 PFMAGFYSKDAIIESINTSNVNSLSLAMTLMATIlTTFYSLRMIYYVALNTPRILPLSSISENPQTT----NPILRLAVG 459
Cdd:PRK05777 383 PPTAGFWGKFYVFEAAVEAGLWWLAVIGVLNSAI-GAFYYLRVIKLMYFDEPPRDAPVNWPLSAGGAvlsvSALLVLVLG 461
|
....*..
gi 187250407 460 SIAAGLL 466
Cdd:PRK05777 462 IFPQPLL 468
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
21-398 |
6.59e-15 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 77.70 E-value: 6.59e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 21 LPTLTPTSKLIPhpstnVLAAKLAFFTSLFPLAH-FIHTGMTTTTCETQLLTM------GTTTIQV---------TLTLD 84
Cdd:PRK12665 1 MPVLAPLPVLLP-----LLAAALTLVLGRRPRAQrAISLLALSAVLVLSAVLLylvdrdGTQAVQLggwdapigiTLVVD 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 85 SYSTffmpiLLFVVWSIMDFTV------QYMKPDLK---VSIFF-SYLItFTMMMMILVTAENMFQFFIGWEGVGIMSFM 154
Cdd:PRK12665 76 RLSA-----LMLVVSSVVLLAVlvyaigQGIRDGDEeqpVSIFLpTYLI-LVAGVSNAFLAGDLFNLYVGFEILLVASYV 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 155 LInwwSFRSSSNK--AAMQAVVYNRLADIGLIITMAwMV------INNTSLSIKGVQAPPDLALIPALGLVLAAAGKSAQ 226
Cdd:PRK12665 150 LL---TLGATAARvrAGVTYVMVSMVSSLLFLIGIA-LVyaatgtLNMADLAVRLDELPSGTRTALFAVLLVAFGIKAAV 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 227 FGFHPWLPAAM-EGPTPVSA----LLhssTMVvaGVFLLIRTSDLLYSSETATTICLFLGAITSLLAATCALAQNDLKKI 301
Cdd:PRK12665 226 FPLSFWLPDSYpTAPAPVTAvfagLL---TKV--GVYAIIRTHTLLFPGGGLDTLLMVVALLTMVVGILGAIAQSDIKRL 300
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 302 IAYSTTSQLGLMMISIGLKQPE---LAFMHISTHAFFKAMLFLCAGtIIHNLDNEQDIRKMGGLKKALPITSSCLVIGSL 378
Cdd:PRK12665 301 LSFTLVSHIGYMVFGIALSTVAglsGAIYYVAHHITVQTTLFLVVG-LIERQAGSSSLRRLGGLAKASPLLAVLFFVPAL 379
|
410 420
....*....|....*....|
gi 187250407 379 ALSGMPFMAGFYSKDAIIES 398
Cdd:PRK12665 380 NLGGIPPFSGFIGKVALLEA 399
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
118-392 |
1.65e-12 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 70.08 E-value: 1.65e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 118 FFSYLITFTMMMMILVTAENMFQFFIGWEGVGIMSFMLINWWSFRSSSNKAAMQ--------AVVYnrLADIGLIITMAW 189
Cdd:PRK02504 112 FAAILLTATLGGMFLSGATELVMIFISLETLSIASYLLTGYMKRDPRSNEAALKylligaasSAIF--LYGSSLLYGLSG 189
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 190 mviNNTSLSIKGVQAPPDLALIPALGLVLAAAG---KSAQFGFHPWLPAAMEG-PTPVSALLhSSTMVVAGVFLLIRTSD 265
Cdd:PRK02504 190 ---GSTQLSAIALALITSPSLGLALALVFVIAGiafKISAVPFHQWTPDVYEGsPTPVVAFL-SVGSKAAGFALAIRLLV 265
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 266 LLYSSETATTICLF--LGAITSLLAATCALAQNDLKKIIAYSTTSQLGLMMISiglkqpelafMHISTHAFFKAMLF--- 340
Cdd:PRK02504 266 TAFPSFDEQWKLLFtaLAILSMVLGNVVALAQTSMKRMLAYSSIGQAGFVMIG----------LVAGTEAGYASMVFyll 335
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 187250407 341 ------LCAGT--IIHNLDNEQD-IRKMGGLKKALPITSSCLVIGSLALSGMPFMAGFYSK 392
Cdd:PRK02504 336 aylfmnLGAFAcvILFSLRTGTDqISDYAGLYQKDPLLTLGLSLCLLSLGGIPPLAGFFGK 396
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
243-429 |
7.50e-12 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 67.75 E-value: 7.50e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 243 VSALLH--SSTMVVAGVFLLIRTSDLLYSSETATTICLFLGAITSLLAATCALAQNDLKKIIAYSTTSQLGLMMISIGLK 320
Cdd:PRK06277 233 GSALLQtfSKFVLVALMLVIFKLFGGLSYFPSAQGVLIALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALG 312
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 321 QP---ELAFMHISTHAFFKAMLFLCAGtIIHNLDNEQDIRKMGGLKKALPITSSCLVIGSLALSGMPFMAGFYSKDAIIE 397
Cdd:PRK06277 313 TPlgiVAGIFHAINHVIYKSALFLGAG-IVSYRTKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPPFNGFQSKLMLAQ 391
|
170 180 190
....*....|....*....|....*....|..
gi 187250407 398 SINTSNVNSLSLAMTLMAtiLTTFYSLRMIYY 429
Cdd:PRK06277 392 AAMQANMPELAIIMIIVS--IGTFVSMMKAFY 421
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
223-392 |
8.25e-12 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 67.72 E-value: 8.25e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 223 KSAQFGFHPWLPAAMEG-PTPVSALLhSSTMVVAGVFLLIRTSDLL-YSSETATTICLFLGAITSL-LAATCALAQNDLK 299
Cdd:CHL00049 227 KLSLAPFHQWTPDVYEGsPTPVVAFL-SVTSKVAASALATRIFDIPfYFSSNEWHLLLEILAILSMiLGNLIAITQTSMK 305
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 300 KIIAYSTTSQLGLMMISIGLKQPELAFMHISTHAFFKAMLFL--CAGTIIHNLDNEQD-IRKMGGLKKALPITSSCLVIG 376
Cdd:CHL00049 306 RMLAYSSIGQIGYVIIGIIVGDSNDGYASMITYMLFYIFMNLgtFACIVLFGLRTGTDnIRDYAGLYTKDPFLALSLALC 385
|
170
....*....|....*.
gi 187250407 377 SLALSGMPFMAGFYSK 392
Cdd:CHL00049 386 LLSLGGIPPLAGFFGK 401
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
120-426 |
9.72e-12 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 67.66 E-value: 9.72e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 120 SYLITFTMMMMI-----LVTAENMFQFFIGWEGVGIMSFMLINWWSFRSSSnKAAMQAVVYNRLADIGLII---TMAWMV 191
Cdd:CHL00011 111 SRLFYFLMLAMYsgqigLFSSRDLLLFFIMWELELIPVYLLLSMWGGKKRL-YSATKFILYTAGGSIFLLIgvlGMGLYG 189
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 192 INNTSLSIKGV---QAPPDLALIPALGLVLAAAGKSAQFGFHPWLPaamegPTPVSAllHSST-MVVAGVFL------LI 261
Cdd:CHL00011 190 SNEPTLNFETLanqSYPVALEILFYIGFLIAYAVKLPIIPLHTWLP-----DTHGEA--HYSTcMLLAGILLkmgaygLI 262
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 262 RTSDLLYSSetATTI----CLFLGAITSLLAATCALAQNDLKKIIAYSTTSQLGLMMISIG-LKQPEL--AFMHISTHAF 334
Cdd:CHL00011 263 RINMELLPH--AHSIfspwLVIVGAIQIIYAASTSLGQRNLKKRIAYSSVSHMGFIIIGIGsITDTGLngAILQIISHGF 340
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 335 FKAMLFLCAGTI---IHNLDNEQdirkMGGLKKALPITSSCLVIGSLALSGMPFMAGFYSKDAIIESINTSNVNSLS--- 408
Cdd:CHL00011 341 IGAALFFLAGTSydrIRLVYLDE----MGGIAIPMPKIFTMFSSFSMASLALPGMSGFVAELIVFFGIITSQKYLLMpki 416
|
330 340
....*....|....*....|
gi 187250407 409 LAMTLMA--TILTTFYSLRM 426
Cdd:CHL00011 417 LITFVMAigMILTPIYLLSM 436
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
230-398 |
2.08e-11 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 66.77 E-value: 2.08e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 230 HPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIRTSDLLYSSETATTICLF-LGAITSLLAATCALAQNDLKKIIAYSTTS 308
Cdd:PRK08042 200 HGWVPQAHANASAPAAALFSTVVMKIGLLGILTLSLLGGNAPLWWGVALLvLGMITAFVGGLYALMEHNIQRLLAYHTLE 279
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 309 QLGLMMISIG-------LKQPEL-------AFMHISTHAFFKAMLFLCAGTIIHNlDNEQDIRKMGGLKKALPITSSCLV 374
Cdd:PRK08042 280 NIGIILLGLGagvtgiaLEQPALialglvgGLYHLLNHSLFKSVLFLGAGSVWFR-TGHRDIEKLGGIGKKMPVISIAML 358
|
170 180
....*....|....*....|....
gi 187250407 375 IGSLALSGMPFMAGFYSKDAIIES 398
Cdd:PRK08042 359 VGLMAMAALPPLNGFAGEWVIYQS 382
|
|
| PRK12664 |
PRK12664 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
89-442 |
5.19e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237164 [Multi-domain] Cd Length: 527 Bit Score: 62.06 E-value: 5.19e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 89 FFMPILLFVVWSIMDFTVQYMkpdlkvsifFSYLItFTMMMMILVTAENMFQFFIGWEGVGIMSFMLINWWSFRSSSNKA 168
Cdd:PRK12664 46 FSLALIFLYILPIKNMRFSEM---------LCYLL-YYISSIAAISSSSLTLVVIGFEFMALSALMIIAAGCPGGNIGAF 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 169 AMQAVVYnRLADIGLIITMAWMVINNTSLSIkgvqapPDLALIpaLGLVLAAAGksaqFGFHPWLPAAMEgptpvSALLH 248
Cdd:PRK12664 116 IHYACVH-FFSGVLLLVGASGQAQNGQYTGY------CKLLFM--LGLLINCAC----FPASSWVVDAYP-----AASNF 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 249 SstMVVAGVFLLIRTSDLLYSSETATTICLFLGAITSLLAATCALAQNDLKKIIAYSTTSQLGLMMISIGLKQPE----- 323
Cdd:PRK12664 178 G--IIVLSLFTTKVAALVLLLFFSGEEILLFLGIITAIYGIIFASLEQNIRRLLCYNVVGQMGLLIIAIGFSGSSgvaig 255
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 324 LAFMHISTHAFFKAMLFLCAGTIIhNLDNEQDIRKMGGLKKAlPITSSCLVIGSLALSGMPFMAGFYSKDAIIESINTSN 403
Cdd:PRK12664 256 ILILQIVLSVVYQTLLFMVADSVI-NRTRKFNLNRVGGLFKM-SLEAMCCIIAILNMGAFPGTAGFVSKSLITHSIDTAG 333
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 187250407 404 VNS-LSLAMTLMATILtTFYS--LRMIYYVALNTPRILPLSS 442
Cdd:PRK12664 334 LTLvLYKKLFLICSLL-LFASvgLKFFWYAFISKSKSKPEAE 374
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
87-435 |
8.47e-10 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 61.48 E-value: 8.47e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 87 STFFMPILLFVVWSimdfTVQYMkpdlkVSIFFSYLITFTMMMMILVTAENMFQFFIGWEGVGIMSFMLINWWSFRSSSN 166
Cdd:MTH00226 111 TGFIVPCSILISWH----SVKYL-----TKSFLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGIWGSREEKM 181
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 167 KAAMQAVVYNRLADIGLIITMAWMV-INNTSLSIKGVQA----PPDLALIPALGLVLAAAGKSAQFGFHPWLPAA-MEGP 240
Cdd:MTH00226 182 QAAYYFFFYTLIGSVLMLLCLFSLYnIHGTTDYLTLASCshvvSEQTQKWIFLGIFLAMAVKIPIFPFHIWLPKAhVEAP 261
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 241 TPVSALLhSSTMVVAGVFLLIRTS--DLLYSSETATTICLFLGAITSLLAATCALAQNDLKKIIAYSTTSQLGLMMIS-- 316
Cdd:MTH00226 262 VAGSVLL-AGILLKLGGYGLVRLSwpILPLGAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHMGLVSITlv 340
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 317 ----IGLKQPELAFMhisTHAFFKAMLFLCAgTIIHNLDNEQDIRKMGGLKKALPITSSCLVIGSLALSGMPFMAGFYSK 392
Cdd:MTH00226 341 thdiIGLTGSIFIML---AHGIVSSLLFILV-TILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGNFIGE 416
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 187250407 393 DAIIesINTSNVNSLSLAMTLMATILTTFYSLRMIYYVALNTP 435
Cdd:MTH00226 417 YLSI--LSSFNWNPIIGVFVCSGVILSAVYSFYFANRVTFGAP 457
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
73-317 |
2.83e-09 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 59.61 E-value: 2.83e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 73 GTTTIQVTLTLDSYSTFFMPILLFVVWSIMDFTVQYMKPDLKVSIFFSYLITFTMMMMILVTAENMFQFFIGWEGVGIMS 152
Cdd:MTH00205 45 MTSFISSSFSFDSLSLPLIMLSFWISLLMVLASYKVFKSNKNSKLFTVSVIMLLLILILSFSVDNLLLFYITFEASLIPT 124
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 153 FMLINWWSFRSSSNKAAMQAVVYNRLADIGLIITMAWMVINNTSLSIKGVQAPPDLAL---IPALGLVLAAAGKSAQFGF 229
Cdd:MTH00205 125 LILILGWGYQPERLQASMYMMMYTLCASLPLLIGLFFLNSLNFSLSMFFNFPLNFSDFylfLYWIFLMLAFLVKLPMYFV 204
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 230 HPWLPAA-MEGPTpvsallhSSTMVVAGVFL------LIRTSDLLY-----SSETATTICLFLGAITSLLaatcALAQND 297
Cdd:MTH00205 205 HLWLPKAhVEAPV-------SGSMILAGVLLklggygLIRITSMLYklnsnFSELFFSISLWGGVMTGMI----CLRQVD 273
|
250 260
....*....|....*....|
gi 187250407 298 LKKIIAYSTTSQLGLMMISI 317
Cdd:MTH00205 274 LKSLIAYSSVGHMGLMVVGV 293
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
122-427 |
4.12e-09 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 59.34 E-value: 4.12e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 122 LITFTMMMM----ILVTA-ENMFQFFIGWEGVGIMSFMLINWWSFRSSSnKAAMQAVVYNRLADIGLII---TMAWM--V 191
Cdd:PRK02546 116 LFYFLMLAMyggqIAVFAvQDMLLFFLAWELELIPVYLLLAIWGGKKRQ-YAATKFILYTAGSSLFILLaalAMAFYgdT 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 192 INNTSLSIKGVQAPPDLALIPALGLVLAAAGKSAQFGFHPWLPAAM-EGPTPVSALLHSSTMVVAGVFLLIRTSDLLYSS 270
Cdd:PRK02546 195 PTFDMTALAAKDFGLGFQLLCYAGLLIAYGVKLPIVPLHTWLPDAHgEATAPVHMLLAGILLKMGGYALLRMNAGMLPDA 274
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 271 ETA-TTICLFLGAITSLLAATCALAQNDLKKIIAYSTTSQLGLMMISIGLKQP---ELAFMHISTHAFFKAMLFLCAGTI 346
Cdd:PRK02546 275 HAQfAPLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVLIGIGSFTDlgtSGAMLQMISHGLIGASLFFLVGAT 354
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 347 ---IHNLDNEQdirkMGGLKKALPITSSCLVIGSLALSGMPFMAGFYSKDAIIESINTSNVNSLS---LAMTLMA--TIL 418
Cdd:PRK02546 355 ydrTHTLMLDE----MGGVGQKMRKMFAMWTACSLASLALPGMSGFVAELMVFVGFATSDAYTLPfrvVVVFLAAvgVIL 430
|
....*....
gi 187250407 419 TTFYSLRMI 427
Cdd:PRK02546 431 TPIYLLSML 439
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
229-435 |
9.64e-09 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 57.52 E-value: 9.64e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 229 FHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIRTSDLLYssetaTTICLFLGAITSLLAATCALAQNDLKKIIAYSTTS 308
Cdd:MTH00112 111 FHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLN-----PTLLLTLAILSTLIGGWGGLNQTQLRKIMAFSSIA 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 309 QLGLMMISIGLKQpelafmHISTHAFFKAMLFLCAGTIIHNLDNEQDIRKMGGLKKALPITSSCLVIGSLALSGMPFMAG 388
Cdd:MTH00112 186 HLGWMIAIITYSP------KLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTLNTTLMLTLLSLAGLPPLTG 259
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 187250407 389 FYSKDAIIESINTSNVNSLSLAMTlMATILTTFYSLRMIYYVALNTP 435
Cdd:MTH00112 260 FMPKWLILQELTKQNMTPTATIMA-MLSLLSLFFYLRLTYISTITLP 305
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
81-317 |
1.56e-08 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 57.09 E-value: 1.56e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 81 LTLDSYStFFMPILLFVVWSIMDFTVQYMKPDLKVSIFFSYLITFTMMMMILV-TAENMFQFFIGWEGVGIMSFMLINWW 159
Cdd:MTH00163 52 FGLDLLS-FGLILLSFWICMLMILSSESVYKKNNYSNLFLFLILFLLIFLLLTfSSMNLLLFYIFFESSLIPTLFLILGW 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 160 SFRSSSNKAAMQAVVYNRLADIGLIITMAWMVINNTSLSIKGVQAPPDLALIPALGLVLAAAGKSAQFGFHPWLPAA-ME 238
Cdd:MTH00163 131 GYQPERLQAGIYLLFYTLFASLPLLVGIFYLYNNSGSLSFFLLNFFGSLNFLWYLSMILAFLVKMPMFFVHLWLPKAhVE 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 239 GPTpvsallhSSTMVVAGVFL------LIRTSDLLYS-----SETATTICLFLGAITSLLAatcaLAQNDLKKIIAYSTT 307
Cdd:MTH00163 211 APV-------SGSMILAGVLLklggygLLRVMSFFSKlglkfNYIWISISLVGGVIVSLIC----LRQVDLKSLIAYSSV 279
|
250
....*....|
gi 187250407 308 SQLGLMMISI 317
Cdd:MTH00163 280 AHMGLVLGGL 289
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
135-389 |
2.10e-08 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 57.03 E-value: 2.10e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 135 AENMFQFFIGWEGVGIMSFMLINWWSfRSSSNKAAMQAVVYNRLADIGLIITMAWMVINNTSLSIK-GVQAPPDLALIPA 213
Cdd:PRK07363 126 AQNLLLFFLFYELELIPFYLLIAIWG-GEKRGYASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSFDyDAISTQNLSLNTQ 204
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 214 L----GLVLAAAGKSAQFGFHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIRTSDLLYsSETATTICLFL---GAITSL 286
Cdd:PRK07363 205 LilltGLLLGFGIKIPLVPLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFGLQLF-PQTWSLVAPGLaiiGTISVI 283
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 287 LAATCALAQNDLKKIIAYSTTSQLGLMMISIGLKQPEL---AFMHISTHAFFKAMLFLCAGtIIHNLDNEQDIRKMGGLK 363
Cdd:PRK07363 284 YGALSAIAQKDIKRMVAYSSIGHMGYILVAAAAGTQLSllgAVAQMISHGLILALLFHLVG-IVERKVGTRDLDVLNGLM 362
|
250 260
....*....|....*....|....*....
gi 187250407 364 ---KALPITSSCLVIGSLALSGMPFMAGF 389
Cdd:PRK07363 363 npiRGLPLTSALLVLAGMASAGIPGLVGF 391
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
211-473 |
2.87e-08 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 56.08 E-value: 2.87e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 211 IPALGLVLAAAGKSAQFGFHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIRTSDLLyssetATTICLFLGAITSLLAAT 290
Cdd:MTH00070 93 LPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLL-----NSNLLIIMGLLSTLIGGW 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 291 CALAQNDLKKIIAYSTTSQLGLMMIsIGLKQPELAFMHISTHAFFKAMLFLCAGTIihnldNEQDIRKMGGLKKALPITS 370
Cdd:MTH00070 168 GGLNQTQLRKIMAYSSIAHLGWMII-ILTFSPHLTLLNLLIYLIMTSSMFLMLMNL-----NSTNINKLSSSWSKNPTLT 241
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 371 SCLVIGSLALSGMPFMAGFYSKDAIIESINTSNVNSLSlAMTLMATILTTFYSLRMIYYVALNTPRILPLSSISENpQTT 450
Cdd:MTH00070 242 SMMMLTLLSLGGLPPTTGFIPKWLILQELTKQNLTTLA-TLMALSALLSLFFYLRLSYAMSLTTSPNTSNSKLYWR-FKN 319
|
250 260
....*....|....*....|....*
gi 187250407 451 NPILRLAVGSIAAGLL--ISSTILP 473
Cdd:MTH00070 320 KTNNLLSLTIILSLMLlpITPTILN 344
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
204-420 |
8.14e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 55.24 E-value: 8.14e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 204 APPDLALIPALGLVLAAA--GKSAQFGFHPWLPAA-MEGPTPVSALLHSSTMVvaGVFLLIRTSDLLYSSET------AT 274
Cdd:PRK12666 202 PAADRALLEAGAALLLVVflIKAAMWPLNFWLPPAyAAASAPVAALFAIMTKV--GIYAILRLSTLLFGPEAgasagfGQ 279
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 275 TICLFLGAITSLLAATCALAQNDLKKIIAYSTTSQLGLMMISIGLKQPE-----LAFMHISTHAFfkAMLFLCAGTI--- 346
Cdd:PRK12666 280 DWLLPGGLATLAFGAIGVLAAQRLRRLAAYLVLVSSGTLLAAIGLGNPAataaaLYYLVHSTLAA--AALFLLADLVerq 357
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 347 -------------IHNLDNEQDIRKMGGLKKALPITSSCLVIGSLALSGMPFMAGFYSKDAIIESinTSNVNSLSLAMTL 413
Cdd:PRK12666 358 rgaaadrlavtpeLYDLDEEEEEEVGVAIPATMALLGLLFFICALALAGLPPLSGFLGKFALLQA--LLNPPGAGAAWWL 435
|
....*..
gi 187250407 414 MATILTT 420
Cdd:PRK12666 436 WALVLLS 442
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
87-473 |
1.38e-07 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 54.30 E-value: 1.38e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 87 STFFMPILLFVVWSimdfTVQYMKPDLKVSIFFSYLitftmMMMILVTAENMFQFFIGWEGVGIMSFMLINWWSFRSSSN 166
Cdd:MTH00204 92 TTLLIPICILISWK----SIKFLFKEFLLCLLFLEV-----LLIGVFSVLDLLLFYILFEGILIPMFLLIGIWGSREEKV 162
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 167 KAAMQAVVYNRLADIG--LIITMAWMVINNTS-LSIKGVQAPPDLALIPALGLVLAAAGKSAQFGFHPWLPAA-MEGPTP 242
Cdd:MTH00204 163 RASYYFFFYTFAGSVFmlLGIFQLYSITGTTDyQILLNIKLPLSIQKWLLVGFFLSLAVKIPQIPFHIWLPQAhVEAPVA 242
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 243 VSALLhsstmvvAGVFL------LIRTSDLLY--SSETATTICLFLGAITSLLAATCALAQNDLKKIIAYSTTSQLGLMM 314
Cdd:MTH00204 243 GSVIL-------AGILLklggygFLRFSWPLFpaASEYFAPLIVMLSVIAVIYGSLTTCRQVDFKRLIAYSSVAHMGLVP 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 315 ISIGLKQPE----LAFMHIStHAFFKAMLFLcAGTIIHNLDNEQDIRKMGGLKKALPITSSCLVIGSLALSGMP----FM 386
Cdd:MTH00204 316 LGLFTHTIEglvaAVFLMLA-HGFVSSALFI-AVTFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLSLANMGFPlscnFV 393
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 387 AGFYSKDAIIEsintsnVNSLSLAMTLMATILTTFYSLRMIYYVALNTPRILPLSSISENPQTTNPILRLAVGSIAAGLL 466
Cdd:MTH00204 394 GEFFSLLAAFE------YSLGLGVLVTSGMVWSAAYSLYLYNRISFGGGSNYLLFSRDLNRRELLAILPLIIAIFLLGIV 467
|
....*..
gi 187250407 467 ISSTILP 473
Cdd:MTH00204 468 PFIIIDL 474
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
109-426 |
2.04e-07 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 53.79 E-value: 2.04e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 109 MKPDLKVSIFFSYLITFTMMMMILVTAENMFQFFIGWEGVGIMSFMLINWWSFRSSSNKAAMQAVVYNRLADIGLIITMA 188
Cdd:MTH00206 85 NEPINRQRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLLIALL 164
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 189 WM--VINNTSLSIKGV-QAPPDLALIPALGLVLAAAGKSAQFGFHPWLPAA-MEGPTpvsallhSSTMVVAGVFL----- 259
Cdd:MTH00206 165 FLqnSLGSLSLYILYFsKLTTWNNNLWWLACILAFLVKLPLYGVHLWLPKAhVEAPV-------AGSMVLAGVLLklggy 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 260 -LIRTSDLL-YSSETATTICLFLGAITSLLAATCALAQNDLKKIIAYSTTSQLGLMMISIgLKQPEL----AFMHISTHA 333
Cdd:MTH00206 238 gMMRIILILgPSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGI-LSGSPWgfkgALLLMIAHG 316
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 334 FFKAMLFlCAGTIIHNLDNEQDIRKMGGLKKALPITSSCLVIGSLALSGMPFMAGFYSKDAIIesINTSNVNSLSLAMTL 413
Cdd:MTH00206 317 LVSSALF-CLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLII--TSLFSWSNFTLPLLG 393
|
330
....*....|...
gi 187250407 414 MATILTTFYSLRM 426
Cdd:MTH00206 394 LGFLFTAIYSLYM 406
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
20-426 |
2.87e-07 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 53.42 E-value: 2.87e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 20 ALPTLTPTSKLIPhpSTNVLAAKLAFFTSLfplAHFIHTGMTTTTCETQLLTMGTTTIQVTLTLDSYSTffmPILLFVVW 99
Cdd:MTH00127 1 MLKILIPTLMLIP--TTWLTPAKWLWTTTL---AHSLLIALASLTWLKNLSETGWSSLNLYMATDPLST---PLLVLTCW 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 100 --SIMDFTVQ---YMKPDLKVSIFFSYLITFTMMMMILVTAENMFQFFIGWEGVGIMSFMLINWWSFRSSSNKAAMQAVV 174
Cdd:MTH00127 73 llPLMILASQnhtAPEPINRQRMYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLF 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 175 YNRLADIGLIITMAWMVINNTSLSIKGVQAPPDLAL------IPALGLVLAAAGKSAQFGFHPWLPAA-MEGPTPVSALL 247
Cdd:MTH00127 153 YTLAGSLPLLVALLLLQNSTGTLSMLTLQYSQPLQLsswadkLWWAGCLLAFLVKMPLYGVHLWLPKAhVEAPIAGSMVL 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 248 HSSTMVVAGVFLLIRTSDLLYSSETATTICLFLGAITSLLAATCALAQNDLKKIIAYSTTSQLGLMMISIGLKQPEL--- 324
Cdd:MTH00127 233 AAVLLKLGGYGMMRMMVMLDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGftg 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 325 AFMHISTHAFFKAMLFLCAGTiIHNLDNEQDIRKMGGLKKALPITSSCLVIGSLALSGMPFMAGFYSKDAIIESIntSNV 404
Cdd:MTH00127 313 ALILMIAHGLTSSALFCLANT-NYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSL--FNW 389
|
410 420
....*....|....*....|..
gi 187250407 405 NSLSLAMTLMATILTTFYSLRM 426
Cdd:MTH00127 390 SPWTLALTGLGTLITAGYSLYM 411
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
81-319 |
1.27e-06 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 51.33 E-value: 1.27e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 81 LTLDSYSTFFMpILLFVVWSIMD-FTVQYMKPDLKVSIFFSYLItftMMMMILVTAENMFQFFIGWEGVGIMSFMLInww 159
Cdd:PRK06459 40 YEYNGVLSFFS-IISTIVWILASlYSIEYDHYGKWLSSLYILTI---LGMAIVLTSDNYLLFLAGWEIMTIPSYVAI--- 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 160 SFRSSSNKAAMQAVVYNRLADIGLIITMAWMVINNTSLSIKGVQAPPDLALIpALGLVLaaagKSAQFGFH--PWLPAAM 237
Cdd:PRK06459 113 ALTKKNKRPAFVFMAFGELSTVLILAGFAWAFIISGTTNFSYLPSPVPLILA-SFGFII----KMGMMPFLvsEWLPIAH 187
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 238 -EGPTPVSALLhSSTMVVAGVFLLIRTSDLLYSSETA--TTICLFLGAITSLLAATCALAQNDLKKIIAYSTTSQLGLMM 314
Cdd:PRK06459 188 gNAPSNFSAIL-SATMTLMGVYGILKMTILTQTIPIGyfGLTILAIGAFSILFGALYAYVSENVKGLLAFSTIENNGAIL 266
|
....*
gi 187250407 315 ISIGL 319
Cdd:PRK06459 267 VALGL 271
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
81-317 |
1.28e-06 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 50.99 E-value: 1.28e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 81 LTLDSYStFFMPILLFVVWSIMDFTVQYMKPDLKVSIFFSYLITFTMMMMILV-TAENMFQFFIGWEGVGIMSFMLINWW 159
Cdd:MTH00150 20 FSVDSMS-SLLISLSLWISGLMMLASQKSVKLRNKSSSFSLLVLLLCLILVLAfSVSSLLMFYFFFEASLIPTLLLILGW 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 160 SFRSSSNKAAMQAVVYNRLADIGLIITMAWMVINNTS---LSIKGVQAPPDLALIPALGLVLAAAGKSAQFGFHPWLPAA 236
Cdd:MTH00150 99 GYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSsfmLLISSLRKLLSSMGLWGLLVFLAFLVKLPMYPFHLWLPKA 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 237 -MEGPTpvsallhSSTMVVAGVFL------LIRTsdLLYSSETATTICLFLGAIT---SLLAATCALAQNDLKKIIAYST 306
Cdd:MTH00150 179 hVEAPV-------AGSMILAGILLklggygILRM--MMVFSLSSSSFSIFLISLSlwgGVLTSLICLRQSDVKSLIAYSS 249
|
250
....*....|.
gi 187250407 307 TSQLGLMMISI 317
Cdd:MTH00150 250 VGHMSLVLAGV 260
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
229-437 |
1.59e-06 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 50.80 E-value: 1.59e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 229 FHPWLPAAMEG-PTPVSALLhsSTMVVAGVFLLirtsdlLYSSETATTICLFLGAITSLLAATCALAQNDLKKIIAYSTT 307
Cdd:MTH00196 114 FHMWAPDVYEGaPTKTTALL--AIVPKLGIFSI------LVSIGLNVNILLIGGLFSLFVGAIGALNQTKIKRLLAYSGI 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 308 SQLGLMMISIGLK-----QPELAFMhisthaFFKAMLFLCAGTIIHNL-DNEQDIRKMGGLKKALPITSSCLVIGSLALS 381
Cdd:MTH00196 186 GHMGFVLWGIEIGsfesiQASLVYL------FIYIIMSICVFSIILALnVYKNLIIEFSGLSRRLPILAITLALTFLSIA 259
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 187250407 382 GMPFMAGFYSKDAIIESINTSNVnSLSLAMTLMATILTTFYSLRM---IYYVALNTPRI 437
Cdd:MTH00196 260 GIPPLVGFLGKWLILLSGVVYQY-YLIFLLAVFCSVIAGVYYVRIvkiLFFQANSFLLI 317
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
227-434 |
2.62e-06 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 49.67 E-value: 2.62e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 227 FGFHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIrtsdLLYSSETATTIClflGAITSLLAATCALAQNDLKKIIAYST 306
Cdd:MTH00197 96 FPFHFWVPSVMESLSWFNCFLLATWQKLAPLLILA----FNSSSFMGLLIC---SVLSSLIGGIGGMNQSNIRQLLAYSS 168
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 307 TSQLGLMMISIgLKQPELAFMHISTHAFFKAMLFLcagtiIHNLDNEQDIRKMGGLKKALPITSSCLVIGSLALSGMPFM 386
Cdd:MTH00197 169 IGHTGWMLMSL-VYSPSIFMLYYLIYFVIMFMLFL-----FLSKNNLSSLNQQYSNPESMSSNLVFLGLSFLSLGGLPPL 242
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 187250407 387 AGFYSKDAIIESINTSNVNSLSLaMTLMATILTTFYSLRMIYYVALNT 434
Cdd:MTH00197 243 SGFFLKWLILTSLLSSNISLITF-MLILSTCFSLYYYLSLAYKSLILS 289
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
116-313 |
3.38e-06 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 49.74 E-value: 3.38e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 116 SIFFSYLITFTMMMMILVTAENMFQFFIGWEGVGIMSFMLINWWSFRSSSNKAAMQAVVYNRLADIGLIITMAWMVINNT 195
Cdd:MTH00014 90 KTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPLLMSILLIFYTNN 169
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 196 SLSIKGVQAPPDLALIPALGLVLAAAG---KSAQFGFHPWLPAA-MEGPTpvsallhSSTMVVAGVFL------LIRTSD 265
Cdd:MTH00014 170 SLSMLMSSMEPPSIYLMNLWWLITILAfmvKMPLYTVHLWLPKAhVEAPV-------AGSMILAGILLklggygLLRMSS 242
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 187250407 266 LLYSSETATT-----ICLFLGAITSLLAatcaLAQNDLKKIIAYSTTSQLGLM 313
Cdd:MTH00014 243 LFMHINKSLSapfssISLVGAVITSLIC----IRQPDLKSLIAYSSVGHMGLM 291
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
208-473 |
2.62e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 46.89 E-value: 2.62e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 208 LALIPALGLVLAAAGKSAQFGFHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIrtsdlLYSSETATTICLFLGAITSLL 287
Cdd:MTH00200 90 LGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLI-----QLAPALNSNILLLLGLLSVLV 164
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 288 AATCALAQNDLKKIIAYSTTSQLGlMMISIGLKQPELAFMHISTHAFFKAMLFLcagtiIHNLDNEQDIRKMGGLKKALP 367
Cdd:MTH00200 165 GGWGGLNQTQLRKILAYSSIAHLG-WLLSGLVYSPNLALLYLLLYVIITLTVFL-----LLNLLNSTKINSLSSSKTKNP 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 368 ITSSCLVIGSLALSGMPFMAGFYSKDAIIESInTSNVNSLSLAMTLMATILTTFYSLRMIY-YVALNTPRILPLSSISEN 446
Cdd:MTH00200 239 ILSMLLGLTLLSLGGLPPLTGFFPKWLILQEL-SKQGLFIYATILLLGSLLSLFFYLRLSYlTLLTLSPNQINMMSSWRT 317
|
250 260
....*....|....*....|....*..
gi 187250407 447 PQTTNPILRLAVGSIAAGLLISSTILP 473
Cdd:MTH00200 318 KSNSNLLVGLLLLLSILGLPLTPQLLF 344
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
216-472 |
3.85e-05 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 46.08 E-value: 3.85e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 216 LVLAAAGKSAQFGFHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIRTSDLLYSSetattICLFLGAITSLLAATCALAQ 295
Cdd:MTH00041 98 ITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISISNLLNSN-----ILILCGILSVLVGGWGGLNQ 172
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 296 NDLKKIIAYSTTSQLGlMMISIGLKQPELAFMHISTHAFFKAMLFLcagtiIHNLDNEQDIRKMGGLKKALPITSSCLVI 375
Cdd:MTH00041 173 TQTRKILAFSSIAHLG-WIIITSAYSPNASIIMFLIYIIINTSIFL-----IGNNFSLSTLSHLNKLSQLNPISAFLFIL 246
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 376 GSLALSGMPFMAGFYSKDAIIESInTSNVNSLSLAMTLMATILTTFYSLRmiyyVALNTPRIL-PLSSISENP--QTTNP 452
Cdd:MTH00041 247 SILSLGGLPPLTGFLNKFISLYCL-IQNNSILISIILIIGSLLSLFFYLR----ISFNTSLTLfPQHSISLFSwrNSGNI 321
|
250 260
....*....|....*....|
gi 187250407 453 ILRLAVGSIAAGLLISSTIL 472
Cdd:MTH00041 322 TVYGVILSILSSISILGLLL 341
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
116-428 |
1.15e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 44.81 E-value: 1.15e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 116 SIFFSYLITFTMMMMILVTAENMFQFFIGWEgVGIMSFMLINWWSFRSSSNKAAMQAVVYNRLADIGLIITMAWMVINNT 195
Cdd:MTH00160 5 SSKLLFLSTLIMGTLISISSNSWFGAWMGLE-INLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNMLNLM 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 196 SLSIkgvqappdlalIPALGLVLAAAGKSAQFGFHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLirtsdllySSETATT 275
Cdd:MTH00160 84 LFNN-----------ISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILL--------SYLINNN 144
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 276 ICLFLGAITSLLAATCALAQNDLKKIIAYSTTSQLGLMMISIGLKQP--ELAFMHISTHAFFKAMLFlcagtiihNLDNE 353
Cdd:MTH00160 145 FIIIIIILSAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENlwLIYFLIYSIISLSIILLF--------NKFNI 216
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 187250407 354 QDIRKMGGLKKALPITSSCLVIGSLALSGMPFMAGFYSKDAIIESINTSNVNSLSLAMTLMATIlTTFYSLRMIY 428
Cdd:MTH00160 217 FFLNQLFNSNNKSKKIKFLLFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLI-TLYFYLRISY 290
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
117-445 |
1.26e-04 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 44.97 E-value: 1.26e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 117 IFFSYLITFTMMMMILVTAENMFQFFIGWEGVGIMSFMLINWWSFRSSSNKAAMQAVVYNRLADIGLIITMAWMVINNTS 196
Cdd:MTH00044 95 TFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLPLLISLIAIYSSSSS 174
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 197 LSIKGV------QAPPDLALIPALGLVLAAAGKSAQFGFHPWLPAA-MEGPTPVSallhsstMVVAGVFL------LIRT 263
Cdd:MTH00044 175 LSIPLSelnwltSLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAhVEAPVAGS-------MILAAILLklggygLIRL 247
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 264 SDLLY------SSETATTICLFLGAITSLLAatcaLAQNDLKKIIAYSTTSQLGLMMISIGLKQP---ELAFMHISTHAF 334
Cdd:MTH00044 248 INLFSlpsannISFILIVFCCWGALITSIIC----LRQTDLKALIAYSSVGHMSLVAAGIFSGTNwgiNGALILMIAHGL 323
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 335 FKAMLFlCAGTIIHNLDNEQDIRKMGGLKKALPITSSCLVIGSLALSGMPFMAGFYSKDAIIESIntSNVNSLSLAMTLM 414
Cdd:MTH00044 324 VSSALF-CLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSI--ISWSILSFPIIGL 400
|
330 340 350
....*....|....*....|....*....|.
gi 187250407 415 ATILTTFYSLrMIYYVALNTPRILPLSSISE 445
Cdd:MTH00044 401 ATVFGAIYSL-LIYQLTNSGSFPSWISNVSP 430
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
115-453 |
1.29e-04 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 44.39 E-value: 1.29e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 115 VSIFFSYLITFTMMMmilVTAENMFQFFIGWEgVGIMSFMLINWWSFRSSSNKAAMQAVVYNRLADIGLIITMAWMvinn 194
Cdd:MTH00011 8 MFLFSSTMTLGTLMA---LSSNNWLFLWMGME-LNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGMTMM---- 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 195 tslsikgVQAPPDLALIPALGLVLAAAGKSAQFGFHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIrtsdlLYSSETAT 274
Cdd:MTH00011 80 -------WSFPSLLKNITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILF-----FFTSHNIL 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 275 TICLFLGAITSLLAATCALAQNDLKKIIAYSTTSQLGLMMISIGLKqPELAFMHISTHAFFKAMLFlcagtIIHNLDNEQ 354
Cdd:MTH00011 148 PMMTSMAAMSALAGGLGGMNQTQLRPLLAYSSIGHMGWMTMISVFS-PSMAILYFMTYIIITTPLM-----LLFAYLNAF 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 355 DIRKMGGLKKALPITSSCLVIGSLALSGMPFMAGFYSKDAIIESInTSNVNSLSLAMTLMATILTTFYSLRMIYYVALNT 434
Cdd:MTH00011 222 STKFNSKISSMSQTTSMSLFIMLLSLGGLPPFTGFMPKLMAIETL-TSNSMILILLVLIVGSLMNLFYYLNLIFNFMYLS 300
|
330
....*....|....*....
gi 187250407 435 PRILPLSSISENPQTTNPI 453
Cdd:MTH00011 301 PTFSSLKSAPYEPKTKILI 319
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
79-317 |
1.41e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 44.66 E-value: 1.41e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 79 VTLTLDSYSTFFM-------PILLFVVWSIMDFTVQYmkpdlkvsiFFSYLITFTMMMMILVTAENMFQFFIGWEGVGIM 151
Cdd:MTH00217 74 VVFAVDGISIFFLiltalltPICILISWNSIKFLIKE---------FLLCLLVIEILLMGVFTILDLVGFYILFEGILIP 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 152 SFMLINWWSFRSSSNKAAMQAVVYNRLADIGL---IITMAWMVINNTSLSIKGVQAPPDLALIPALGLVLAAAGKSAQFG 228
Cdd:MTH00217 145 MFLIIGIWGSREEKVQASYYFFFYTFIGSVFMllgIFTLYSYAGTTDYQALCCLKIEKELQYFIFLGFFLSLAIKIPKIP 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 229 FHPWLPAA-MEGPTPVSALLhsstmvvAGVFL------LIRTS--DLLYSSETATTICLFLGAITSLLAATCALAQNDLK 299
Cdd:MTH00217 225 FHIWLPQAhVEAPVAGSVIL-------AGVLLklggygFIRFSwpLLPEASEYFSPLIQTLSLLAIIYGSLTTCRQVDLK 297
|
250
....*....|....*...
gi 187250407 300 KIIAYSTTSQLGLMMISI 317
Cdd:MTH00217 298 RIIAYSSVAHMGLVTLGI 315
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
121-426 |
1.06e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 41.83 E-value: 1.06e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 121 YLITFTMMMMILV---TAENMFQFFIGWEGVGIMSFMLINWWSFRSSSNKAAMQAVVYNRLADIGLIITMAWMVINNTSL 197
Cdd:MTH00068 95 YISMLIILQLTLIlafSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLPLLIALLILQNSLGSL 174
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 198 SIKGVQ-APPDLALIPALGL-----VLAAAGKSAQFGFHPWLPAA-MEGPTPVSallhsstMVVAGVFL------LIRTS 264
Cdd:MTH00068 175 SLILLElMSPMQLMTYTNKIwwlacLLAFMVKMPLYGLHLWLPKAhVEAPIAGS-------MILAAVLLklggygILRIS 247
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 265 DLL-YSSETATTICLFLGAITSLLAATCALAQNDLKKIIAYSTTSQLGLmMISIGLKQPELAF-----MHIStHAFFKAM 338
Cdd:MTH00068 248 ILLtPLSKELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGL-VIAAALIQTPWSFsgaiiLMIS-HGLTSSA 325
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 339 LFlCAGTIIHNLDNEQDIRKMGGLKKALPITSSCLVIGSLALSGMPFMAGFYSKDAIIESIntSNVNSLSLAMTLMATIL 418
Cdd:MTH00068 326 LF-CLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSL--FNWSNWTILITGLGTLI 402
|
....*...
gi 187250407 419 TTFYSLRM 426
Cdd:MTH00068 403 TAAYTLYM 410
|
|
| PRK06588 |
PRK06588 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
292-432 |
4.20e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 168619 [Multi-domain] Cd Length: 506 Bit Score: 40.15 E-value: 4.20e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250407 292 ALAQNDLKKIIAYSTTSQLGLMMISIGLKQPELA-------FMHISTHAFFkAMLFlcagTII---HNLDNEQDIRKmgg 361
Cdd:PRK06588 214 SLIEKNLKRLICYLTVSQLGFILAAISINSPNIAylitsfiFIHILYNGLF-ALYF----AYIedeYDIKNYQDLQN--- 285
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 187250407 362 lKKALPITSSCLVIGSLALSGMPFMAGFYSKDAIIESINTSNVNSLSLAMTLMATILTTFYSLRMIYYVAL 432
Cdd:PRK06588 286 -TQINFILLIGFVISILIYTSILPISSSYIKDEIANILNENNVMLFSKIATCTVLFGLLMESSTSLLRRFM 355
|
|
| |
