|
Name |
Accession |
Description |
Interval |
E-value |
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
1-571 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 679.56 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 1 MCSLSFFSLFFMSTFVFILSIYYLLFDYSVFIEWELFSLNSSMVVMTFIFDWMSLIFMSFVMYISSLVIYYSEEYMFGES 80
Cdd:MTH00165 3 MCLISFFFLFFLSLILFFLGLYFLLNDYSLFIEWELFSLNSSSIVMTFLFDWMSLLFMSFVLFISSMVIYYSKSYMSGDK 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 81 NMNRFIFIVLMIILSMALLIISPNLISILLGWDGLGLVFYCLVIYYQNVKSYSAGMLTALSNRIGDVSILISIAWMLNFG 160
Cdd:MTH00165 83 NINRFIYLVLLFVLSMMLLIISPNLISILLGWDGLGLVSYCLVIYYQNKKSYNAGMLTALSNRIGDVAILLSIAWMMNFG 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 161 GWNYIYYYDFISESFEMKIITMLIVLASMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDNYNF 240
Cdd:MTH00165 163 SWNFIFYLDFMKNSFEMLLIGLLIMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNNLLFSSFF 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 241 GWFLLLIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMWILAMGYPKLAFFHLLAHALFKALLFMCAGSMIHNLKDS 320
Cdd:MTH00165 243 SKFLLLISLLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSLGFPKLAFFHLLTHALFKALLFLCAGSIIHNMSNS 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 321 QDIRFMGSIVHFMPLTSICFNVSSLSLCGMPFLAGFYSKDLILEMVCLSWTNCFIFFLYFFSTGSTASYSFRLFYYSMSG 400
Cdd:MTH00165 323 QDIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDLILEMVSMSNLNFFIFFLFFFSTGLTVSYSFRLIYYSMSG 402
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 401 DNNYYSSFSFYDKGYYISFSMLSLLFIAVFGGSLLSWLIFPIPNMIVLPYYFKFLTILVVILGSYLGYLISNFIYFYDLI 480
Cdd:MTH00165 403 DFNLKSLNNLSDESKFMLKSMILLLFMSIFGGSMLSWLIFPEPYMICLPFYLKLLTLFVILLGGWLGYELSLMSLSYNLK 482
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 481 SLKFLSLVSFAGSMWFMPFLSTNFISYLPLKMGYYSLKAFDYGWGEMLGGKGLYSLFIYMINYIQNWYDLNFKTYLLTFI 560
Cdd:MTH00165 483 SLKNYKLSSFLGSMWFMPFLSTYGISYYPLNLGSLSLKSFDQGWSEYFGGQGLYNFLKKLSKLIQWLQNNNLKIYLLSFL 562
|
570
....*....|.
gi 288900672 561 FWMIILFMLFF 571
Cdd:MTH00165 563 LWMIILLLLFL 573
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
1-570 |
8.43e-170 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 493.59 E-value: 8.43e-170
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 1 MCSLSFFSLFFMSTFVFILSIYYLLFDYSVFIEWELFSLNSSMVVMTFIFDWMSLIFMSFVMYISSLVIYYSEEYMFGES 80
Cdd:MTH00151 3 MSSLSSFLLFSYSVFLFPLLGYFGLNGISLIFEWELLSVSSCSFSFELVLDWVSLSFSGVVCLISGCVFLFSSSYMSEDP 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 81 NMNRFIFIVLMIILSMALLIISPNLISILLGWDGLGLVFYCLVIYYQNVKSYSAGMLTALSNRIGDVSILISIAWMLNFG 160
Cdd:MTH00151 83 FLKRFMWLVMLFVLSMNLLIFIPSLPSLLLGWDGLGIVSFALVIYYQNKKSLSAGMLTALTNRIGDVLILLSIALLVLLG 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 161 GWNYIYYYDFisesFEMKIITMLIVLASMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDNYN- 239
Cdd:MTH00151 163 HWSILSMWDF----KLSGWLGLLLVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFFPFLSSSSg 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 240 FGWFLLLIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMWILAMGYPKLAFFHLLAHALFKALLFMCAGSMIHNLKD 319
Cdd:MTH00151 239 FSSFLLFISLLTLLMAGISACYENDLKKIIALSTLSQLGVMMFSLGLGMPSLALFHLYTHALFKALLFLCAGSIIHSSSG 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 320 SQDIRFMGSIVHFMPLTSICFNVSSLSLCGMPFLAGFYSKDLILEMVCLSWTNCFIFFLYFFSTGSTASYSFRLFYYSMS 399
Cdd:MTH00151 319 TQDIRLLGSLFLSLPLTSGCLNISSLSLCGAPFLSGFYSKDLILESSLMSPTSLLMVLLMFVGVGLTALYSARLSFCLVW 398
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 400 GDNNYYSSFSFYDKGYYISFSMLSLLFIAVFGGSLLSWLIFPIPNMIVLPYYFKFLTILVVILGSYLGYLISNFIYFydl 479
Cdd:MTH00151 399 GSMKSSSLSSKSDEDFYVSLPMLLLSLGALIGGKLLQSLFEGFSEEFFLPSYLKLLIGFVILLGLFLSFGFWDSGFS--- 475
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 480 iSLKFLSLVSFAGSMWFMPFLSTNFISYLPLKMGYYSLKAFDYGWGEMLGGKGLYSLFIYMINYIQNWYDLNFKTYLLTF 559
Cdd:MTH00151 476 -SSKMVKLSFFFSSMWFLSPLSSQPLKSLSLKLSNSSMKSLDMGWLEILGGQGVFKANKSFSVLNESWPVKWFNFFIGLI 554
|
570
....*....|.
gi 288900672 560 IFWMIILFMLF 570
Cdd:MTH00151 555 LLLVLFLVVIS 565
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
3-568 |
1.28e-164 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 480.80 E-value: 1.28e-164
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 3 SLSFFSLFFMSTFVFILSIYYLLFDYSVFIEWELFSLNSSMVVMTFIFDWMSLIFMSFVMYISSLVIYYSEEYMFGESNM 82
Cdd:MTH00207 8 SIASYLLWFMSILMFPLSLYLMMCNKTILIEWEIFTISSSPINFTIILDPTGTLFSSTVLFISANVLLFAKTYMQEDKFL 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 83 NRFIFIVLMIILSMALLIISPNLISILLGWDGLGLVFYCLVIYYQNVKSYSAGMLTALSNRIGDVSILISIAWMLNFGGW 162
Cdd:MTH00207 88 SRFISLVLLFVLSMNMLIFFPHLMILLLGWDGLGLVSFILVIYYQNPKSLGAGMITALTNRIGDVMLLLSIGWTLNQGHW 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 163 NYIYYYDfiseSFEMKIITMLIVLASMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDN-YNFG 241
Cdd:MTH00207 168 SITNMWQ----TDMNNYIALSIMIAAMTKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYPFLSStYWFN 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 242 WFLLLIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMWILAMGYPKLAFFHLLAHALFKALLFMCAGSMIHNLKDSQ 321
Cdd:MTH00207 244 PALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGMPKLALFHLITHALFKALLFVCAGSLIHSHHHSQ 323
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 322 DIRFMGSIVHFMPLTSICFNVSSLSLCGMPFLAGFYSKDLILEMVCLSWTNCFIFFLYFFSTGSTASYSFRLFYYSMSGD 401
Cdd:MTH00207 324 DLRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILESSLFYPHNSLMILMIFLATALTAAYSTRFTLAVLWSP 403
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 402 NNYYSSFSFYDKGYYISFSMLSLLFIAVFGGSLLSWLIFPIPNMIVLPYYFKFLTILVVILGSYLGYLISNFIYFYDLIS 481
Cdd:MTH00207 404 NSSSPYHHLEDEDKSLTTPMLLLTLGAITSGSALNWWLPTPQEEPILPLQYKLLPLLVVTLGALLAWLFTTPNITKTPLL 483
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 482 LKFLSLVSFAGSMWFMPFLSTNFISYLPLKMGYYSLKAFDYGWGEMLGGKGLYSLFIYMINYIQNWYDLNFKTYL-LTFI 560
Cdd:MTH00207 484 INNPLSHFASCLMWFLVPLSSQFIMSTPMNLSHNYLKLLDQGWLEMLGAQGTFKMFSRSSNNVMKLQKNIPNNYLmMSFV 563
|
....*...
gi 288900672 561 FWMIILFM 568
Cdd:MTH00207 564 LLTIIIIM 571
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
6-570 |
3.48e-164 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 479.14 E-value: 3.48e-164
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 6 FFSLFFMSTFVFILSIYYLLFDYSVFIEWELFSLNSSMVVMTFIFDWMSLIFMSFVMYISSLVIYYSEEYMFGESNMNRF 85
Cdd:MTH00209 6 MFSLMLLFLFSFLMFVIFMWFQKIVILEWELLSLNSMSISFPLIIDKMSLLFSSVVLLISGSVMWFSTSYMAGEKFKKRF 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 86 IFIVLMIILSMALLIISPNLISILLGWDGLGLVFYCLVIYYQNVKSYSAGMLTALSNRIGDVSILISIAWMLNFGGWNyI 165
Cdd:MTH00209 86 ILLVLLFILSMNFLIFVPNLITLLLGWDGLGLVSYLLVIYYQNSKSLSAGMLTALTNRVGDALLILSIAWMLMHGNWN-I 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 166 YYYDFISESfeMKIITMLIVLASMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDN-YNFGWFL 244
Cdd:MTH00209 165 FYLNFNSNL--GSVISVLIVLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSLFSsPFFSMSL 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 245 LLIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMWILAMGYPKLAFFHLLAHALFKALLFMCAGSMIHNLKDSQDIR 324
Cdd:MTH00209 243 LLLGSLTTLMASMSANVESDLKKIIALSTLSQLGLMMCSLGLNQPELAFFHLITHALFKALLFICAGNIIHSHGHSQDIR 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 325 FMGSIVHFMPLTSICFNVSSLSLCGMPFLAGFYSKDLILEMVCLSWTNCFIFFLYFFSTGSTASYSFRLFYYSMSGDNNY 404
Cdd:MTH00209 323 MVGNLWYQMPITSICLNIANLSLCGIPFLAGFYSKDLILESMLESNMPIMTLILMFLSTSLTAAYSMRLSYFSLWGPNSS 402
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 405 YSSFSFYDKGYYISFSMLSLLFIAVFGGSLLSWLIFPIPNMIVLPYYFKFLTILVVILGSYLGYLISNFIYFydliSLKF 484
Cdd:MTH00209 403 KSLNSSFDQNKLNLKPMLVLTLGSITGGSVMSWVMVPSVNSVVLPWFLKLLPIMLILFGVLLMYMVLKKNFF----LIKG 478
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 485 LSLVSFAGSMWFMPFLSTNFISYLPLKMGYYSLKAFDYGWGEMLGGKGLYSLFIYMINYIQNWYDLNFKTYLLTFIFWMI 564
Cdd:MTH00209 479 YKVNYFLSQMWFLPDLSSQPVNKFTMKLSKTMLKLLDQGWVEKMSGQGSFKVLKKSSKLSQIIQNNSLKLFVTFMMLILL 558
|
....*.
gi 288900672 565 ILFMLF 570
Cdd:MTH00209 559 GVILFM 564
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
3-572 |
1.51e-115 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 355.41 E-value: 1.51e-115
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 3 SLSFFSLFFMSTFVFILSIYYLLFDY--SVFIEWELFSLNSSMVVMTFIFDWMSLIFMSFVMYISSLVIYYSEEYMFGES 80
Cdd:MTH00211 28 KLHIKKAVKLSFFISLIPLLIFLDQGleTILTNWSWINLGLFSLNLSFKFDFYSIFFTSVALYVTWSILEFSLWYMSSEP 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 81 NMNRFIFIVLMIILSMALLIISPNLISILLGWDGLGLVFYCLVIYYQNVKSYSAGMLTAL-SNRIGDVSILISIAWML-N 158
Cdd:MTH00211 108 NINRFFKYLLLFLIFMLILVSANNLFQLFIGWEGVGIMSFLLISWWYGRSDANTAALQAViYNRIGDIGLLLSMVWLLlN 187
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 159 FGGWNYIYYYDFiseSFEMKIITMLIVLASMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPM-LDN 237
Cdd:MTH00211 188 LNSWEISQLFIL---NLDLTLFLLGLLLAAMGKSAQFGFHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRLSPLfQNN 264
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 238 YNFGWFLLLIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMWILAMGYPKLAFFHLLAHALFKALLFMCAGSMIHNL 317
Cdd:MTH00211 265 QLILGAVLLLGALTMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTLGLNQPQLAFLHICTHAFFKAMLFMCSGSIIHGL 344
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 318 KDSQDIRFMGSIVHFMPLTSICFNVSSLSLCGMPFLAGFYSKDLILEMVCLSWTNCFIFFLYFFSTGSTASYSFRLFYYS 397
Cdd:MTH00211 345 NNEQDIRKMGGLSKNLPFTSSCLFLGSLALMGFPFLSGFFSKDLILESMNGSYLNAWALLLTLLATSLTAAYSFRLIFLS 424
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 398 MSGDNNyYSSFSFYDKGYYISFSMLSLLFI-AVFGGSLLSWLIFPIPNMIV-LPYYFKFLTILVVILGSYLGYLISNFiy 475
Cdd:MTH00211 425 LGGYPR-FLSLSPINENYKLLKNPLKRLALgSILAGFIITSNLPPEKPEILsLPFLLKLMPLLVTIVGLLLGLELVNL-- 501
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 476 fydLISLKFLSLVSFAGSMWFMPFLSTNFISYLPLKMG-YYSLKAFDYGWGEMLGGKGLYSLFIYMINYIQNWYDLNFKT 554
Cdd:MTH00211 502 ---THKQLKTSTLSFSNMLGYYPPIIHRLLPKLSLKWGqTLSTHLMDLGWYEKLGPKGLGVNQKKLIKLVTSPQQGLIKS 578
|
570
....*....|....*...
gi 288900672 555 YLLTFIFWMIILFMLFFL 572
Cdd:MTH00211 579 YLALLLLSLLLILLLFLL 596
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
10-570 |
3.69e-98 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 310.56 E-value: 3.69e-98
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 10 FFMSTFVFILSIYYLLfdYSVFIEWELFSLNSSMVVMTFIFDWMSLIFMSFVMYISSLVIYYSEEYMFGESNMNRFIFIV 89
Cdd:MTH00004 44 FLISLIPLTLFLNSGT--ESITTNWPWIFTTTFNIPISFKLDQYSLMFLPIALFVTWSILEFSTWYMASDPHITKFFKYL 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 90 LMIILSMALLIISPNLISILLGWDGLGLVFYCLVIYYQN-VKSYSAGMLTALSNRIGDVSILISIAWM-LNFGGWNyiyy 167
Cdd:MTH00004 122 LIFLIAMLILITANNMFQLFIGWEGVGIMSFLLIGWWSGrAEANTAALQAIIYNRIGDIGLILSMAWLaMTLNTWE---- 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 168 ydfISESFEMKIITML----IVLASMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDNYNFGWF 243
Cdd:MTH00004 198 ---IQQLFSPTQTPTLpllgLILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRTHPLLQNNQTALT 274
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 244 L-LLIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMWILAMGYPKLAFFHLLAHALFKALLFMCAGSMIHNLKDSQD 322
Cdd:MTH00004 275 IcLCLGALTTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQPQLAFLHISTHAFFKAMLFLCSGSIIHNLNNEQD 354
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 323 IRFMGSIVHFMPLTSICFNVSSLSLCGMPFLAGFYSKDLILEMVCLSWTNCFIFFLYFFSTGSTASYSFRLFYYSMSGDN 402
Cdd:MTH00004 355 IRKMGGLQKTLPITSSCLTIGNLALMGTPFLSGFYSKDTIIETLNTSYLNAWALLLTLLATSFTAAYSLRMILLVQTGFP 434
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 403 NYYSSFSFYDKGYYISFSMLSLLFIAVFGGSLLSWLIFPI-PNMIVLPYYFKFLTILVVILGSYLGYLISNFIYFydLIS 481
Cdd:MTH00004 435 RTPPTTPINENTPTIINPITRLALGSILAGLLISSTILPTkTPPMTMPTTTKLAALIVTILGILLALELSNMTTT--LTP 512
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 482 LKFLSLVSFAGSMWFMPFLSTNFISYLPLKMGY-YSLKAFDYGWGEMLGGKGLYSLFIYMINYIQNWYDLNFKTYLLTFI 560
Cdd:MTH00004 513 PKQNTLHNFSNQLAFFNPLTHRLLPMTLLKSSQkIATHLIDLSWLEKMGPKGLANLQLTASKTLTTLQKGLIKNYLTSFA 592
|
570
....*....|
gi 288900672 561 FWMIILFMLF 570
Cdd:MTH00004 593 LTILLLLLLT 602
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
10-570 |
7.75e-92 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 293.74 E-value: 7.75e-92
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 10 FFMSTFVFILSIYYLLfdYSVFIEWELFSLNSSMVVMTFIFDWMSLIFMSFVMYISSLVIYYSEEYMFGESNMNRFIFIV 89
Cdd:MTH00066 42 FFISLIPLMIFINQGL--ESITTSFHWMNIFNFNINSSFKFDQYSIIFLPIALFVTWSILEFAIWYMHSDPKINRFFKYL 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 90 LMIILSMALLIISPNLISILLGWDGLGLVFYCLV-IYYQNVKSYSAGMLTALSNRIGDVSILISIAW-MLNFGGWNYIYY 167
Cdd:MTH00066 120 LIFLIAMMILVTANNLFQLFIGWEGVGIMSFLLIgWWHARADANTAALQAVLYNRVGDIGLILSMAWlAMNTNSWELQQI 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 168 YDFISESFemkIITMLIVLASMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPML-DNYNFGWFLLL 246
Cdd:MTH00066 200 FLLNDNST---LPLLGLILAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLLeNNQTALTICLC 276
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 247 IGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMWILAMGYPKLAFFHLLAHALFKALLFMCAGSMIHNLKDSQDIRFM 326
Cdd:MTH00066 277 LGALTTLFTAACALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFFHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKM 356
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 327 GSIVHFMPLTSICFNVSSLSLCGMPFLAGFYSKDLILEMVCLSWTNCFIFFLYFFSTGSTASYSFRLFYYSMSGDNNYYS 406
Cdd:MTH00066 357 GGLQKALPITTSCLTIGSLALTGTPFLAGFFSKDAIIEAMNTSNLNSWALILTLIATSFTAVYSFRIIYFSSMKFPRSLP 436
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 407 SFSFYDKGYYISFSMLSLLFIAVFGGSLLSWLIFPIPNMIV-LPYYFKFLTILVVILGSYLGYLISNFIYFYDLISLKFl 485
Cdd:MTH00066 437 LSPINENNPLIINPIKRLAWGSIIAGLLIIFNILPMKPQILtMPTFMKLAALLVTLLGLLIALDLAKITSKTTPKTKMH- 515
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 486 slvSFAGSMWFMPFLSTNFISYLPLKMGY-YSLKAFDYGWGEMLGGKGLYSLFIYMINYIQNWYDLNFKTYLLTFIFWMI 564
Cdd:MTH00066 516 ---SFSNLLAFFPTIIHRLSPKTNLNSGQnIATHLTDMTWYEKSGPKGLTNQQLPPIKTITNIQTGLIKTYLTLFLITLL 592
|
....*.
gi 288900672 565 ILFMLF 570
Cdd:MTH00066 593 LMLILL 598
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
3-572 |
3.51e-89 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 287.64 E-value: 3.51e-89
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 3 SLSFFSLFFMSTFVFILSIYYLLFDYSVFI----EWelFSLNSSMVVMTFIFDWMSLIFMSFVMYISSLVIYYSEEYMFG 78
Cdd:MTH00208 56 NFSISLLKTLAFLSLINLLIWILLGCPNINislsNW--LSNTLFNFSLSFIFDFYFILFFSVALFVTWSIIEFSHYYMSN 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 79 ESNMNRFIFIVLMIILSMALLIISPNLISILLGWDGLGLVFYCLVIYYQNVKSYSAGMLTA-LSNRIGDVSILISIAW-M 156
Cdd:MTH00208 134 DPNKNAFFRLLIIFLLNMLILTSSNNLFLLFIGWEGVGFLSFLLISWWTTRNDANSSALQAvIYNRIGDIGIILFLSLsL 213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 157 LNFGGWNYIYYYDFIS-ESFEMKIITMLIVLASMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPML 235
Cdd:MTH00208 214 INFNSWNLNEILSLNNsNSFLINILLFGILLAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIRTSPLI 293
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 236 DNYNfgWFL---LLIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMWILAMGYPKLAFFHLLAHALFKALLFMCAGS 312
Cdd:MTH00208 294 SNSP--WFLslcLILGSLTALFAASTAISQHDIKKIIAYSTTSQLGLMVVAIGLNQPNLALFHICTHAFFKAMLFLCSGS 371
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 313 MIHNLKDSQDIRFMGSIVHFMPLTSICFNVSSLSLCGMPFLAGFYSKDLILEMVCLSWTNCFIFFLYFFSTGSTASYSFR 392
Cdd:MTH00208 372 IIHSLNNEQDLRKMGGLSFLLPVTSSCIILGSLALMGTPFLAGFYSKDLILEAGLASISNLLSIILALIATLLTAVYSFR 451
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 393 LFYYSMSGDNNYYSSFSFYDKGYYISFSMLSLLFIAVFGGSLLSWLIFPIPNmIVLPYYFKFLTILVVILGSylgYLISN 472
Cdd:MTH00208 452 IIFFCFLNNPSFSPLSPISEENPNLTNPLLRLAIGTIISGWFFSNFVFNLPP-LTLPLILKSLPLIVTIIGA---AFSFS 527
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 473 FIYFYDLISLKFLSLVSFAGSMWFMPFLSTNFISYLPLKMGYYSLKAFDYGWGEMLGGKGLYSLFIYMINYIQNWYDLNF 552
Cdd:MTH00208 528 FLLSLSSNPINSNFFSFLSNQWFFVNISHSIIISFSFFTSLFGSTRTLDRGWSENIGPQGIGNTSSTLSKSYQLTQTGYI 607
|
570 580
....*....|....*....|
gi 288900672 553 KTYLLTFIFWMIILFMLFFL 572
Cdd:MTH00208 608 KQYLLSSTLLFLLILTLSLI 627
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
10-570 |
4.66e-88 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 284.05 E-value: 4.66e-88
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 10 FFMSTFVFILSIYylLFDYSVFIEWELFSLNSSMVVMTFIFDWMSLIFMSFVMYISSLVIYYSEEYMFGESNMNRFIFIV 89
Cdd:MTH00108 44 FIISLIPTMMFIH--SGQEMIISNWHWMTIQTLKLSLSFKLDYFSMIFIPVALFVTWSIMEFSMWYMHSDPNINRFFKYL 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 90 LMIILSMALLIISPNLISILLGWDGLGLVFYCLV-IYYQNVKSYSAGMLTALSNRIGDVSILISIAW-MLNFGGWNYIYY 167
Cdd:MTH00108 122 LLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIgWWYGRTDANTAALQAILYNRIGDIGFILAMAWfLLNLNSWDLQQI 201
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 168 ydFISESFEMKIITMLIVLASMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDNYNFGWFLLL- 246
Cdd:MTH00108 202 --FMLNPNNSNLPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMENNKTIQTLTLc 279
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 247 IGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMWILAMGYPKLAFFHLLAHALFKALLFMCAGSMIHNLKDSQDIRFM 326
Cdd:MTH00108 280 LGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKM 359
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 327 GSIVHFMPLTSICFNVSSLSLCGMPFLAGFYSKDLILEMVCLSWTNCFIFFLYFFSTGSTASYSFRLFYYSMSGDNNYYS 406
Cdd:MTH00108 360 GGLFKTLPFTSTALIIGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLITLIATSLTAAYSTRIIFFALLGQPRFPP 439
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 407 SFSFYDKGYYISFSMLSLLFIAVFGGSLLSWLIFP--IPNMiVLPYYFKFLTILVVILGSYLGYLISNFIYFYDLISLKf 484
Cdd:MTH00108 440 LITINENNPLLINPIKRLLLGSIFAGFLISNNIPPttIPQM-TMPLYLKLTALAVTILGFILALELNLLTNNLKFKYPS- 517
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 485 lSLVSFAGSMWFMPFLSTNFISYLPLKMGYYS-LKAFDYGWGEMLGGKGLYSLFIYMINYIQNWYDLnFKTYLLTFIFWM 563
Cdd:MTH00108 518 -NTFKFSNMLGYFPTIMHRLPPYMNLTMSQKLaSMLLDLIWLEKILPKTISLIQMKASTTISNQKGL-IKLYFLSFLITL 595
|
....*..
gi 288900672 564 IILFMLF 570
Cdd:MTH00108 596 TLSLLLF 602
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
14-470 |
1.09e-85 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 278.19 E-value: 1.09e-85
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 14 TFVFILSIYYLLFDYSVFIE-WELFSLNSSMVVMTFIFDWMSLIFMSFVMYISSLVIYYSEEYMFGESNMNRFIFIVLMI 92
Cdd:COG1009 41 AFVLSLLLFPAVLGGEVVVElYTWIPVGSLGLDFGFRLDGLSLLMLLLVTGVGLLVHIYSIGYMSGDPGLARFFAYLLLF 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 93 ILSMALLIISPNLISILLGWDGLGLVFYCLVIYYQNVKSYSAGMLTA-LSNRIGDVSILISIAWMLN-FGGWNY---IYY 167
Cdd:COG1009 121 MAAMLGLVLSDNLLLLFVFWELVGLCSYLLIGFWYEKPSARRAARKAfLVTRVGDLGLLLGILLLGAiAGTLNFselLAA 200
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 168 YDFISESFEMKIITMLIVLASMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPML-DNYNFGWFLLL 246
Cdd:COG1009 201 APTILSSPLLTLILLLLLLGAFGKSAQFPLHFWLPDAMEGPTPVSALLHAATMVKAGVYLLARLSPLFaLSPVWLTVVAI 280
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 247 IGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMWILAMGYPKLAFFHLLAHALFKALLFMCAGSMIHNLkDSQDIRFM 326
Cdd:COG1009 281 IGAITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVGAYVAALFHLLTHAFFKALLFLGAGSVIHAT-GTRDIRKM 359
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 327 GSIVHFMPLTSICFNVSSLSLCGMPFLAGFYSKDLILE-MVCLSWTNCFIFFLYFFSTGSTASYSFRLFYYSMSGDNNYY 405
Cdd:COG1009 360 GGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEaALEAGGLGPLLLAVALLGAFLTAFYSFRLFFLVFFGKPRPK 439
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 288900672 406 SSFSFYDKGYYISFSMLSLLFIAVFGGSLLSWL---------IFPIPNMIVLPYYFKFLTILVVILGSYLGYLI 470
Cdd:COG1009 440 TPKHPHESPWLMTLPLVVLAVLSLVLGLLLPGLlegllapaaVLGGELHLAHGLLLNALPLLLSLLGIALGYLL 513
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
46-398 |
9.43e-81 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 265.16 E-value: 9.43e-81
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 46 MTFIFDWMSLIFMSFVMYISSLVIYYSEEYMFGESNMNRF-----IFIVLMIILSMAlliisPNLISILLGWDGLGLVFY 120
Cdd:MTH00137 82 ISFKFDHYSIIFTPIALYVTWSILEFASWYMHADPNMNRFfkyllIFLIAMIILVTA-----NNMFQLFIGWEGVGIMSF 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 121 CLV-IYYQNVKSYSAGMLTALSNRIGDVSILISIAWML-NFGGWNyIYYYDFISESFEMKIITMLIVLASMTKSAQIPFS 198
Cdd:MTH00137 157 LLIgWWYGRADANTAALQAVIYNRVGDIGLILAMAWMAtNLNSWE-IQQIFALSKDFDLTLPLLGLILAATGKSAQFGLH 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 199 SWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDNYNfgwfLLLIGCM------TMFMA--GLGANfefDLKKIIA 270
Cdd:MTH00137 236 PWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLSPLMENNQ----TALTTCLclgaltTLFTAtcALTQN---DIKKIVA 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 271 LSTLSQLGLMMWILAMGYPKLAFFHLLAHALFKALLFMCAGSMIHNLKDSQDIRFMGSIVHFMPLTSICFNVSSLSLCGM 350
Cdd:MTH00137 309 FSTSSQLGLMMVTIGLNQPQLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLHHLTPFTSSCLTIGSLALTGT 388
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 288900672 351 PFLAGFYSKDLILEMVCLSWTNCFIFFLYFFSTGSTASYSFRL-FYYSM 398
Cdd:MTH00137 389 PFLAGFFSKDAIIEALNTSHLNAWALTLTLIATSFTAVYSLRVvFFVSM 437
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
2-470 |
9.36e-77 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 254.51 E-value: 9.36e-77
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 2 CSLSFFSLFFMSTFVFILSIYYLLFDYSVFIEWELFSLNSSMVVMTFIFDWMSLIFMSFVMYISSLVIYYSEEYMFGESN 81
Cdd:TIGR01974 33 GIGSVGLSAALSAFVFVDFFLNGEGEAFTQSLFPWISVGGFQVDFGLRLDGLSLTMLVVVTGVGSLVHIYSIGYMAHDEG 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 82 MNRFIFIVLMIILSMALLIISPNLISILLGWDGLGLVFYCLV-IYYQNVKSYSAGMLTALSNRIGDVSILISIAWMLN-F 159
Cdd:TIGR01974 113 YSRFFAYLNLFTFSMLMLVLADNFLQLFFGWEGVGLCSYLLIgFWYKKPSANNAAIKAFVVNRVGDFGLLLGIFLIFWyF 192
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 160 GGWNYIYYYDFISESFE--MKIITMLIVLASMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDN 237
Cdd:TIGR01974 193 GTLNFQEVFALAPGAFFsaLTLICLLLFIGAMGKSAQLPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARTSPLFEL 272
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 238 YN-FGWFLLLIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMWILAMGYPKLAFFHLLAHALFKALLFMCAGSMIHN 316
Cdd:TIGR01974 273 SPtALYLVTIIGAITALFAATVALVQNDIKRILAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHA 352
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 317 LKDSQDIRFMGSIVHFMPLTSICFNVSSLSLCGMPFLAGFYSKDLILEMVCLSWTNCFIFFLYFFSTGSTASYSFRLFYY 396
Cdd:TIGR01974 353 MHHEQDIRKMGGLRKKMPVTYITFLIGSLALIGFPGFAGFFSKDLILEAAFASGTHSFLFVAGLIGAFLTAFYSFRLIFM 432
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 397 SMSGDNNYYSSFSFYDKGYYISFSMLSLLFIAVFGGSLLSWLIFPIPNMIV-----------LPYYFKFLTILVVILGSY 465
Cdd:TIGR01974 433 VFHGKERHEADAHPHESPLVMLLPLIVLAVGSVFAGFFIVPLFEFLKGVLPtsaepalehhhVPALEIWSPTAVAILGIL 512
|
....*
gi 288900672 466 LGYLI 470
Cdd:TIGR01974 513 LAYLL 517
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
4-569 |
7.90e-74 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 246.91 E-value: 7.90e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 4 LSFFSLFFMSTFVFILSIYYLLFDYSVFIE-WELFSLNSSMVVMTFIFDWMSLIFMSFVMYISSLVIYYSEEYMFGESNM 82
Cdd:MTH00020 31 LTSSCLIISLSWSFLIFYEILFNSSTTYIKlWRWLDSDLLTVYFGLQFDGLVAIMLLVVTTVSTLVHIFSTAYMRGDPHI 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 83 NRFIFIVLMIILSMALLIISPNLISILLGWDGLGLVFYCLV-IYYQNVKSYSAGMLTALSNRIGDVSILISIAWMLNFGG 161
Cdd:MTH00020 111 PRFMSYLSLFTFLMVVLVTSDNYLQLFIGWEGVGLCSYLLInFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDRFG 190
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 162 ---WNYIYYYDFISESFEMKIITMLIVLASMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDNY 238
Cdd:MTH00020 191 sldFSSVFNMVVSAPSSDITLICLFLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLFEQA 270
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 239 NFGWFLL-LIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMWILAMGYPKLAFFHLLAHALFKALLFMCAGSMIHNL 317
Cdd:MTH00020 271 PLALIIVtIVGSLTVFFAATVGLVQNDLKKVIAYSTCSQLGYMVVACGLSHYSISLFHLMNHAFFKALLFLSAGSVIHAL 350
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 318 KDSQDIRFMGSIVHFMPLTSICFNVSSLSLCGMPFLAGFYSKDLILEMVCLSWTNCFIFFLYFFSTGSTASYSFRLFYYS 397
Cdd:MTH00020 351 SDEQDMRKMGGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSKDLILELAFGQYYLIFAYWLGCFSALLTAFYSIRLIYLT 430
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 398 -MSGDNNYYSSFSFYDKG-YYISFSMLSLLFIAVFGGSLLSWLIF--------PIPNMI-VLPYYFKFL-TILVVILGSY 465
Cdd:MTH00020 431 fLSNTNLKKAVFFHLHEGdWNLLLPLGILALGSIFVGYLAKEMIWsfqitlppIVPLSIkLLPVFLSLGgIGLVIILYFY 510
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 466 LGYLISNFIYFYDLISLKFLslvsfaGSMWFMPFLSTNFISYLPLKMGYY-SLKAFDYGWGEMLGGKGLYSLFIYMINYI 544
Cdd:MTH00020 511 SSKTFRVPFSFIGRNSYTFL------GSAWQFNYILNYFLIKKIWKGGHLiSYRTIDKGVLELVGPKGISNFLIILTQGL 584
|
570 580
....*....|....*....|....*.
gi 288900672 545 QNWY-DLNFKTYLLTFIFWMIILFML 569
Cdd:MTH00020 585 SSLQsGLVFNYALVILIGVAIFIWGL 610
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
46-470 |
2.61e-72 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 243.14 E-value: 2.61e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 46 MTFIFDWMSLIFMSFVMYISSLVIYYSEEYMFGESNMNRFIFIVLMIILSMALLIISPNLISILLGWDGLGLVFYCLVIY 125
Cdd:PRK06590 78 FGLRVDGLSATMLVVVTGVSFLVHIYSIGYMAHDEGYRRFFAYLNLFTFSMLMLVLSDNLLQLFFGWEGVGLCSYLLIGF 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 126 YQNVKSYSAGMLTA-LSNRIGDVSILISIAWML-NFGGWNYIYYYDFISESFE-----MKIITMLIVLASMTKSAQIPFS 198
Cdd:PRK06590 158 WYKKPSAGAAAMKAfIVNRVGDVGLALGIFLLFaEFGSLNYDEVFAAAPQFFGlgwsaLTLICLLLFIGAMGKSAQFPLH 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 199 SWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLD-NYNFGWFLLLIGCMTMFMAGLGANFEFDLKKIIALSTLSQL 277
Cdd:PRK06590 238 TWLPDAMEGPTPVSALIHAATMVTAGVYLVARMSPLFElSPEALLFVAIVGAVTALFAAFIGLVQTDIKRVLAYSTMSQL 317
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 278 GLMMwiLAMG---YPkLAFFHLLAHALFKALLFMCAGSMIHNLKDSQDIRFMGSIVHFMPLTSICFNVSSLSLCGMPFLA 354
Cdd:PRK06590 318 GYMF--LALGvgaYA-AAIFHLMTHAFFKALLFLGAGSVIHAMHHEQDIRKMGGLRKKMPVTYATFLIGTLALIGIPPFA 394
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 355 GFYSKDLILEmVCLSWTNCFIFFLYFFSTGSTASYSFRLFYYSMSGDNNYYsSFSFYDKGYYISFSMLSLLFIAVFGG-- 432
Cdd:PRK06590 395 GFFSKDEILE-AAFANGHINLFVAGLVGAFLTAFYSFRLIFLVFHGKEKEK-IHHPHESPAVMTLPLIVLAVLSVFAGal 472
|
410 420 430 440
....*....|....*....|....*....|....*....|....*.
gi 288900672 433 ---SLLSWLIFP-----IPNMIVLPYYFKFLTILVVILGSYLGYLI 470
Cdd:PRK06590 473 ivpPFLGVLPLTtelahGEAEHHLPVWVALLPLVVALAGIALAWLL 518
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
50-569 |
5.75e-72 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 241.84 E-value: 5.75e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 50 FDWMSLIFMSFVMYISSLVIYYSEEYMFGESNMNRFIFIVLMIILSMALLIISPNLISILLGWDGLGLVFYCLV-IYYQN 128
Cdd:MTH00210 78 FDSLTSTMLIVITSVSALVHIYSTGYMSGDPHIPRFMSYLSLFTFLMIVLVTSDNYVQLFIGWEGVGLCSYLLInFWLTR 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 129 VKSYSAGMLTALSNRIGDVSILISIAWMLN-FGGWNYIYYYDFISESFE---MKIITMLIVLASMTKSAQIPFSSWLPAA 204
Cdd:MTH00210 158 IKANKAAIKAMLINRVGDIGLVLAMIMILKeFGTLEFSTISSLLVTNINkesLTIICLLLFIGAVGKSAQLGLHTWLPDA 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 205 MAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDNYNFGWFLL-LIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMWI 283
Cdd:MTH00210 238 MEGPTPVSALIHAATMVTAGVFLIIRSGPLFEGSPLALTIVtILGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYMVMV 317
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 284 LAMGYPKLAFFHLLAHALFKALLFMCAGSMIHNLKDSQDIRFMGSIVHFMPLTSICFNVSSLSLCGMPFLAGFYSKDLIL 363
Cdd:MTH00210 318 CGISNYSTSLFHLMNHAFFKALLFLSAGSVIHAVSDEQDMRKMGGLIKSIPFTYVMILIGSLSLMGFPYLTGFYSKDLIL 397
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 364 EMVCLSWTNCFIFFLYFFSTGSTASYSFRLFYYSMSGDNNyySSFSFYDKGYYISFSMLSLLFIAVFGGSLLSWLI--FP 441
Cdd:MTH00210 398 ELTYDKYYIAFAYWLGSFSALLTAFYSIRLIYLTFITNTN--SKKEVFIGVHESSWNITFPLLLLAFGSIFVGYLGkeVV 475
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 442 IPNMI--VLPYYFKFLTILVVILGSYLGYLISNFIYFYDLIS------LKFLSLVSFAGSMWFMPFLSTNFISYLPLKMG 513
Cdd:MTH00210 476 LSNVIppIVPNSIKMIPLLFSLLGALLAFVIYNSMVFLIKISrrgvsiRLYHVIYTFLNSAWQFNYVINHFIVKNIWKFG 555
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*..
gi 288900672 514 YY-SLKAFDYGWGEMLGGKGLYSLFIYMINYIQNWYDLNFKTYLLTFIfWMIILFML 569
Cdd:MTH00210 556 HLiTYRIIDRGLLEIIGPRGISKVLIKLTQKISNLQSGMVFNYALIMI-IFTTLFIS 611
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
12-520 |
7.03e-59 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 204.77 E-value: 7.03e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 12 MSTFVFILSIYYLLFDYSV----FIEWELFSLNSSMVVMTFIFDWMSLIFMSFVMYISSLVIYYSEEYMFGESNMNRFIF 87
Cdd:MTH00095 1 MNILIFLILFFFFFLLLFIlflpFMKLNLFFLEWDFLSLKFNFYFNSLLFSLILLLVTLSVLVFSSYYMNGELNFNYFYF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 88 IVLMIILSMALLIISPNLISILLGWDGLGLVFYCLVIYYQNVKSYSAGMLTALSNRIGDVSILISIAWMLNFGgwnyiyy 167
Cdd:MTH00095 81 VLLIFVGSMFMLNFSNSVFTMLLSWDLLGISSFFLVLFYNNWDSNSGAMNTALTNRIGDFFIFLFFSGFIFSS------- 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 168 YDFISESFEMKIITMLIVLASMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDNYNFGWFLLLI 247
Cdd:MTH00095 154 YYFFSFSFFSSSMILMLLLTSFTKSAQFPFSSWLPKAMSAPTPVSSLVHSSTLVTAGLILLMNFSYLILNMNVMKIMLLI 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 248 GCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMWILAMGYPKLAFFHLLAHALFKALLFMCAGSMIHNLKDSQDIRFMG 327
Cdd:MTH00095 234 GLFTMFFSSLSALVEEDMKKVVALSTLSQMGFSMLTFGSGLSFVSFIHLLSHALFKSCLFMQVGYLIHSNFGQQDGRNYS 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 328 SIVHFMPLTSICFNVSSLSLCGMPFLAGFYSKDLILEMVCLSWTNCFIFFLYFFSTGSTASYSFRLFyysMSGDNNYYSS 407
Cdd:MTH00095 314 NNGNLPMFIQLQLLVTLFCLCGLMFTSGMVSKELILELFFFNNYMIFFSLMFFFSVFLTFGYSYRLW---KSFFLSFSKV 390
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 408 FSFYDKGYYISFSMLSLLFIAVFggsLLSWLIFpipNMIVLPYYFKFLTILVVILGSYLGYLISNFIYFYDLISLKFLSL 487
Cdd:MTH00095 391 VNVYSSSVLMNFLSLMLVFFSVF---FLWWLNF---NLLNLPSLFLYLDFYVPLFYLFMIMLFSFFFFKLLFKELKYKFF 464
|
490 500 510
....*....|....*....|....*....|...
gi 288900672 488 VSFAGSMWFMPFLSTNFISYLPLKMGYYSLKAF 520
Cdd:MTH00095 465 VDYFAKNVIYKLKNLKFFDLFLNKFGYKGFNFF 497
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
46-401 |
4.29e-57 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 202.95 E-value: 4.29e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 46 MTFIFDWMSLIFMSFVMYISSLVIYYSEEYMFGESNMNRFIFIVLMIILSMALLIISPNLISILLGWDGLGLVFYCLVIY 125
Cdd:PRK07376 85 MGYVIDPLGAVMLVLVTTVALLVMIYSDGYMAHDPGYVRFFAYLSLFSSSMLGLVISPNLVQIYVFWELVGMCSYLLVGF 164
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 126 YQNVKSYSAGMLTA-LSNRIGDVSILISIA---WMLNFGGWNYIYyyDFISESFEMKIIT--------MLIVLASMTKSA 193
Cdd:PRK07376 165 WYDRKGAADAAQKAfVVNRVGDFGLLLGILglfWATGSFDFDGIA--DRLSELVSSGAVSgwlalllcILVFLGPMAKSA 242
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 194 QIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDNYNF-GWFLLLIGCMTMFMAGLGANFEFDLKKIIALS 272
Cdd:PRK07376 243 QFPLHVWLPDAMEGPTPISALIHAATMVAAGVFLVARMYPVFEQFPAvMTVIAWTGAITAFLGASIALTQNDIKKGLAYS 322
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 273 TLSQLGLMMWILAMGYPKLAFFHLLAHALFKALLFMCAGSMIHNLKD--------SQDIRFMGSIVHFMPLTSICFNVSS 344
Cdd:PRK07376 323 TISQLGYMVMAMGCGAYSAGLFHLMTHAYFKAMLFLGSGSVIHGMEEvvghdpvlAQDMRLMGGLRKYMPITAITFLIGC 402
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 288900672 345 LSLCGMPFLAGFYSKDLILEMVCLSwtNCFIFFLYFFSTGSTASYSFRLFYYSMSGD 401
Cdd:PRK07376 403 LAISGIPPFAGFWSKDEILGAAFEA--NPALWFVGFLTAGMTAFYMFRMYFLTFEGE 457
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
13-570 |
1.45e-55 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 198.64 E-value: 1.45e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 13 STFVFILSIYYLLFDYSVfIEWELFSLNSSMVVMTFI---FDWMSLIFMSFVMYISSLVIYYSEEYMFGESNMNRFIFIV 89
Cdd:MTH00032 39 STLIALFLAYEVLINDAV-VHIELYKWIESEIFITHIgllYDTLSVTMLLVISSISTLVHIYSTSYMSDDPHVPRFLCYL 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 90 LMIILSMALLIISPNLISILLGWDGLGLVFYCLVIYYQN-VKSYSAGMLTALSNRIGDVSILISIAWM------LNFGGW 162
Cdd:MTH00032 118 SLFTFLMMVLVTSDNYLQLFIGWEGVGVCSYLLVAFWTTrIQANKAAIKAIVVNRVGDVGVILGMVLIyktigsLDFLTF 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 163 N------------YIYYYDFISESFEMKIITMLIVLASMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIR 230
Cdd:MTH00032 198 NggsvgsgimdrgYYGGGAYESPLAPFAIIGILLLIGCIGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIR 277
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 231 FSPMLDNYNFGWFLLLI-GCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMWILAM-GYPKLAFFHLLAHALFKALLFM 308
Cdd:MTH00032 278 SFPLFEKAPLTLLIITIfGALTAFFAATVGLVQNDLKKVIAYSTCSQLGYMVLIIGIeGSHNVGLFHLVNHAFFKALLFL 357
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 309 CAGSMIHNLK-DSQDIRFMGSIVHFMPLTSICFNVSSLSLCGMPFLAGFYSKDLILEMVCL------------------- 368
Cdd:MTH00032 358 SAGSVIHSTTvDEQDMRKMGGLIHSIPFTYTMMLIGSFSIMGLPYLTGFYSKDLILELTYSgrnmgipfgssllkiqgdi 437
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 369 -----------------SWTNCFIFFLYFFSTGSTASYSFRLFYYSM------SGDNNYYSSFSFYDKGYYISFSMLSll 425
Cdd:MTH00032 438 gikkddrgsiggpegypSRGSAFAFWLGTVAALLTAFYSIRLVYITFiispnsPKESLISSHINIVDKRVLTVLSLLC-- 515
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 426 FIAVFGGSLLSWLIF-----PI--PNMIVLPYYFKFLTILVVILGSYLGYLISNFIYFYDLISLKFLSLVSFAGSMWFMP 498
Cdd:MTH00032 516 FGAIFVGYLIQDILIgdiehPIvpPLIKVMPTLMGLFGMGLCLWAQKGTREGELYWGFDPIGPSFLLSIYSFLGGAWQGD 595
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 288900672 499 FLSTNFISYLPLKMGYYSL-KAFDYGWGEMLGGKGLYSLFIYMINYIQNWYDLNFKTYLLTFIFWMIILFMLF 570
Cdd:MTH00032 596 HLINKLVAIPLFSFGHWGIyKTLDRGWLELFGPQGISTIALRVSQFISNLQSGVISRYALVLLSFTIIFLALW 668
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
102-382 |
3.54e-51 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 177.51 E-value: 3.54e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 102 SPNLISILLGWDGLGLVFYCLVIYY-QNVKSYSAGMLTALSNRIGDVSILISIAWMLNFGGWNYIY----YYDFISESFE 176
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWgKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDelskALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 177 MKIITMLIVLASMTKSAQIPFSSWLPAA-MAAPTPVSALVhSSTLVTAGVYLLIRFSPMLDNYNFGW--FLLLIGCMTMF 253
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLLYLPSSPFIqqILLILAIISML 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 254 MAGLGANFEFDLKKIIALSTLSQLGLMMWILAMGYP---KLAFFHLLAHALFKALLFMCAGSMIHNLKDSQDIRFMGSIV 330
Cdd:pfam00361 160 LGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIygiQAAIFHLLTHGLFSAGLFLCAGSVIYRRVHTRNIRDYGGLA 239
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 288900672 331 HFMPLTSICFNVSSLSLCGMPFLAGFYSKDLILEMVCLSWTNCFIFFLYFFS 382
Cdd:pfam00361 240 KTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVGS 291
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
51-364 |
1.78e-46 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 175.62 E-value: 1.78e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 51 DWMSLIFMSFVMYISSLVIYYSEEYMFGESNMNRFIFIVLMIILSMALLIISPNLISILLGWDGLGLVFYCLViyyqnVK 130
Cdd:PRK12650 78 DALSLFFALLALVIGAVVFIYSARYLPRKKGNTSFYLLMTAFMAAMLLLVLADDVVVLFVAWELVSLASFFLI-----AR 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 131 SYSAG----MLTALSNRIGDVSILISIAWMLNFGG---WNYIYYYDFISE-SFEMKIITMLIVLASMTKSAQIPFSSWLP 202
Cdd:PRK12650 153 SGSGGeagsIRTLILTFFGGLTLLAAVAIAATQTGttsLSGILHSDVWAEkPGLTTVVAVLIAVAAFTKSAQFPFHFWLP 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 203 AAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDNyNFGWFLLLIGC--MTMFMAGLGANFEFDLKKIIALSTLSQLGLM 280
Cdd:PRK12650 233 EAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHD-VAVWNWLLIIVgmITALMGAVFAVQKTDLKKLTAYSTVSQLGWI 311
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 281 MWILAMGYP---KLAFFHLLAHALFKALLFMCAGSMIHNlKDSQDIRFMGSIVHFMPLTSICFNVSSLSLCGMPFLAGFY 357
Cdd:PRK12650 312 VATIGVGTPfalTAAVVHTLAHALFKSSLFMLIGVVDHQ-AGTRDIRRLGSLWRRMPFTFVSVTIAALSMAAVPPLFGFV 390
|
....*..
gi 288900672 358 SKDLILE 364
Cdd:PRK12650 391 SKEGMLT 397
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
47-364 |
4.00e-45 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 164.93 E-value: 4.00e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 47 TFIFDWMSLIFMSFVMYISSLVIYYSEEYMFGESNMNRFIFIVLMIILSMALLIISPNLISILLGWDGLGLVFYCLVIYY 126
Cdd:COG0651 71 VLVADRLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALG 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 127 QNVKSYSAGMLTALSNRIGDVSILISIAWM-LNFGGWNYIYYYDFISE--SFEMKIITMLIVLASMTKSAQIPFSSWLPA 203
Cdd:COG0651 151 GTKEALRAGLKYLILNLVGSALFLLGVGLLyGATGTLNMADLAARLAEldPGLLLAAFALLLVGFGIKAALFPLHFWLPD 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 204 AMA-APTPVSALVhSSTLVTAGVYLLIRFSPMLDNYNF----GWFLLLIGCMTMFMAGLGANFEFDLKKIIALSTLSQLG 278
Cdd:COG0651 231 AYPaAPSPVSALL-SGLLTKVGVYAILRVLTLLFGADPalflGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIG 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 279 LMMWILAMGYPKL---AFFHLLAHALFKALLFMCAGSMIHNLKdSQDIRFMGSIVHFMPLTSICFNVSSLSLCGMPFLAG 355
Cdd:COG0651 310 YILLGLGLGTPLGlagALFHLLNHALAKALLFLAAGAIERATG-TRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSG 388
|
....*....
gi 288900672 356 FYSKDLILE 364
Cdd:COG0651 389 FVSKWLLLQ 397
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
48-364 |
1.17e-43 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 166.25 E-value: 1.17e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 48 FIFDWMSLIFMSFVMYISSLVIYYSEEYMFGESNMNRFIFIVLMIILSMALLIISPNLISILLGWDGLGLVFYcLVIYYQ 127
Cdd:PRK12647 60 FLLDGLSLTFALLITGIGTLIVLYAGGYLKGHPDLGRFYSYILLFMASMLGLVLSDNLITLFVFWELTSITSF-LLIGFN 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 128 NVKSYS------------AGMLTALSNRI--GDVSILISIAWMLNFGgwnyiyyyDFISESFEMKIITMLIVLASMTKSA 193
Cdd:PRK12647 139 HEREAArraalqallvtgGGGLALLAGLIllGNVTGTYSLSELLASG--------DVIREHPLYLAILLLVLGGAFTKSA 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 194 QIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPML-DNYNFGWFLLLIGCMTMFMAGLGANFEFDLKKIIALS 272
Cdd:PRK12647 211 QFPFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLgGTPLWQTILPLFGGLTMLTGALLAVRQTDLKLILAYS 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 273 TLSQLGLMMWILAMGYP---KLAFFHLLAHALFKALLFMCAGSMIHNlKDSQDIRFMGSIVHFMPLTSICFNVSSLSLCG 349
Cdd:PRK12647 291 TVSALGTLVMLLGLGSElaiKAAVLFLVAHSLYKGALFMVAGIIDHE-TGTRDITKLGGLRRAMPITAAAALLAALSMAG 369
|
330
....*....|....*
gi 288900672 350 MPFLAGFYSKDLILE 364
Cdd:PRK12647 370 LPPLFGFLAKELIYE 384
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
47-366 |
5.77e-42 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 161.55 E-value: 5.77e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 47 TFIFDWMSLIFMSFVMYISSLVIYYSEEYMFGESNMNRFIFIVLMIILSMALLIISPNLISILLGWDGLGLVFYCLVIYY 126
Cdd:TIGR00940 70 TLYMDGLALLFSLLITGIGVLVVLYSIYYLSKEEPLPNFYAYLLAFMGAMLGVVLSDNLILLYVFWELTSIVSFLLISYW 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 127 -QNVKSYSAGMLTALSNRIGDVSILISIAWMLNFGGWNYIYYY----DFISESFEMKIITMLIVLASMTKSAQIPFSSWL 201
Cdd:TIGR00940 150 hHRAHSRYGAQKSLTITVFGGLAMLGGLILLGKITGSFSIDAViasaDAIRNSPLFGTAMVLVLLGAFTKSAQFPFHIWL 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 202 PAAMAAPTPVSALVHSSTLVTAGVYLLIRFSP-MLDNYNFGWFLLLIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLM 280
Cdd:TIGR00940 230 PDAMEAPTPVSAYLHSATMVKAGLYLLARFTPvFAGTEAWFWIVGLAGLITLLWGSYFAIFQQDLKGILAFSTISQLGLI 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 281 MWILAMGYPKL----------------AFFHLLAHALFKALLFMCAGSMIHNlKDSQDIRFMGSIVHFMPLTSICFNVSS 344
Cdd:TIGR00940 310 MVLLGLGSPSYhyqgddskiyalaavaAVFHLINHATFKGSLFMAAGIIDHE-TGTRDIRKLGGLFHIMPITFTLAMIAS 388
|
330 340
....*....|....*....|..
gi 288900672 345 LSLCGMPFLAGFYSKDLILEMV 366
Cdd:TIGR00940 389 AAMAGVPPFNGFLSKEMFFAEA 410
|
|
| NADH5_C |
pfam06455 |
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of ... |
389-570 |
2.36e-40 |
|
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of several NADH dehydrogenase subunit 5 proteins and is found in conjunction with pfam00361 and pfam00662.
Pssm-ID: 368917 [Multi-domain] Cd Length: 181 Bit Score: 144.62 E-value: 2.36e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 389 YSFRLFYYSMSGDNNYYSSFSFYDKGYYISFSMLSLLFIAVFGGSLLSWLIFPIPNMIVLPYYFKFLTILVVILGSYLGY 468
Cdd:pfam06455 1 YSFRLIYYVMTGSPRFSSLSPINENNPIMINPIKRLAIGSIIGGSLLSWLIFPKPPMMTMPLYLKLLALLVTILGLLLGL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 469 LISNFIYFYDLISLKFlSLVSFAGSMWFMPFLSTNFISYLPLKMGYYSLKAFDYGWGEMLGGKGLYSLFIYMINYIQNWY 548
Cdd:pfam06455 81 ELSNLSNKQLKKSLNF-NLHSFSGSMWFFPNLSHRLIPKLSLKLGQKLAKQIDQGWSEKFGPQGIAKTLMTLSKIIQNSQ 159
|
170 180
....*....|....*....|..
gi 288900672 549 DLNFKTYLLTFIFWMIILFMLF 570
Cdd:pfam06455 160 KGLIKIYLLSFLLWLLLLLLLI 181
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
47-364 |
6.81e-40 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 155.73 E-value: 6.81e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 47 TFIFDWMSLIFMSFVMYISSLVIYYSEEYMFGESNMNRFIFIVLMIILSMALLIISPNLISILLGWDGLGLVFYCLVIYY 126
Cdd:PRK12648 71 SLRLDGLAWLFALLILGIGLLVVLYARYYLSPADPVPRFFSFLLLFMGAMLGIVLSGNLILLVVFWELTSLSSFLLIGYW 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 127 QNVKSYSAGMLTALSnrIGDVSILISIAWMLNFGgwnyiyyydFISESFEMKII----------------TMLIVLASMT 190
Cdd:PRK12648 151 HHRADARRGARMALT--VTGAGGLALLAGVLLLG---------HIVGSYDLDVVlaagdlirahplyppaLVLILLGAFT 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 191 KSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDNYNFgWFLL--LIGCMTMFMAGLGANFEFDLKKI 268
Cdd:PRK12648 220 KSAQFPFHFWLPHAMAAPTPVSAYLHSATMVKAGVFLLARLWPVLAGTEE-WFWIvgGAGLITLLLGAYFALFQHDLKGL 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 269 IALSTLSQLGLMMWILAMGYPK---LAFFHLLAHALFKALLFMCAGSMIHNlKDSQDIRFMGSIVHFMPLTSICFNVSSL 345
Cdd:PRK12648 299 LAYSTISHLGLITLLLGLGSPLaavAAIFHIINHATFKASLFMAAGIIDHE-TGTRDMRRLSGLRRLMPITATLAMVAAA 377
|
330
....*....|....*....
gi 288900672 346 SLCGMPFLAGFYSKDLILE 364
Cdd:PRK12648 378 AMAGVPLLNGFLSKEMFFA 396
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
48-364 |
2.05e-38 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 151.06 E-value: 2.05e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 48 FIFDWMSLIFMSFVMYISSLVIYYSEEYMFGES-NMNRFIFIVLMIILSMALLIISPNLISILLGWDGLGLVFYCLVIY- 125
Cdd:PRK12646 74 LRLDGLSLMFSLIISLIGIAVFFYATQYLSSRKdNLPRFYFYLTLFMFSMIGIVLSDNTILMYVFWELTSVSSFLLISYw 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 126 YQNVKSYSAGMLTALSNRIGDVSILISIAWMLNFGGWNYIY----YYDFISESFEMKIITMLIVLASMTKSAQIPFSSWL 201
Cdd:PRK12646 154 YNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITeilgQADHIKNHGLFIPMIFMFLLGAFTKSAQFPFHIWL 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 202 PAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDNYNF-GWFLLLIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLM 280
Cdd:PRK12646 234 PRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSNMyIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMI 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 281 MWILAMG--------------YPKLAF---FHLLAHALFKALLFMCAGSMIHNlKDSQDIRFMGSIVHFMPLTSICFNVS 343
Cdd:PRK12646 314 MAMVGIGggyaqhqqdaiasiYVFVLFaalFHLMNHAIFKCALFMGVGIIDHE-AGTRDIRILSGMRQLFPKMNLVMTIA 392
|
330 340
....*....|....*....|.
gi 288900672 344 SLSLCGMPFLAGFYSKDLILE 364
Cdd:PRK12646 393 ALSMAGVPFLNGFLSKEMFLD 413
|
|
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
67-394 |
3.76e-38 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 149.66 E-value: 3.76e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 67 LVIYYSEEYMFGESNMNRFIFIVLMIILSMALLIISPNLISILLGWDGLGLVFYCLV-IYYQNVKSYSAGMLTALSNRIG 145
Cdd:CHL00025 106 LVLIYSDNYMSHDQGYLRFFAYLSFFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIgFWFTRPIAANACQKAFVTNRVG 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 146 DVSILISIA---WMLN-------FGGWNYIYYYDFISESFeMKIITMLIVLASMTKSAQIPFSSWLPAAMAAPTPVSALV 215
Cdd:CHL00025 186 DFGLLLGILgfyWITGsfefrdlFEIFNNLIYNNEVNLLF-ATLCAFLLFLGPVAKSAQFPLHVWLPDAMEGPTPISALI 264
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 216 HSSTLVTAGVYLLIRFSPMLDNYNFGWFLL-LIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMWILAMGYPKLAFF 294
Cdd:CHL00025 265 HAATMVAAGIFLVARLLPLFIVIPYIMNLIsLIGIITALLGATLALAQKDIKRGLAYSTMSQLGYMMLALGIGSYRAALF 344
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 295 HLLAHALFKALLFMCAGSMIHNL--------KDSQDIRFMGSIVHFMPLTSICFNVSSLSLCGMPFLAGFYSKDLILEMv 366
Cdd:CHL00025 345 HLITHAYSKALLFLGSGSVIHSMepivgyspDKSQNMVLMGGLRKYMPITKTTFLLGTLSLCGIPPLACFWSKDEILND- 423
|
330 340
....*....|....*....|....*....
gi 288900672 367 clSWTNCFIF-FLYFFSTGSTASYSFRLF 394
Cdd:CHL00025 424 --SWLYSPIFaIIAWSTAGLTAFYMFRIY 450
|
|
| ND5 |
MTH00063 |
NADH dehydrogenase subunit 5; Provisional |
8-470 |
5.05e-37 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214414 [Multi-domain] Cd Length: 522 Bit Score: 144.25 E-value: 5.05e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 8 SLFFMSTFVFILSIYYLLFDYSVFIEWELFSLNSSMVVMTFIFDWMSLIFMSFVMYISSLVIYYSEEYMFGESNMNRFIF 87
Cdd:MTH00063 1 SVLLVSLLLCLLIFFLFLVGVSSSVSLNFLSFGGYSWLINFDFDYVTFGVLLMLLICFYYSLLYTFHYFGGSYASFLLNK 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 88 IVLMIILSMALLIISPNLISILLGWDGLGLVFYCLVIYYQNVKSYSAGMLTALSNRIGDVSILISIawmlnfgGWNYIYY 167
Cdd:MTH00063 81 LIVLFVLVMGILVLTGDFLSTLIFWEYLGVVSFFLILFYDNFLSLRASVVTLVSSRFGDVCLFLLI-------GLSCWGG 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 168 YDFIsesfemkIITMLIVLASMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDNYNFGWFLLLI 247
Cdd:MTH00063 154 SGSF-------LCCLFFFLIVFTKSASFPFISWLLEAMRAPTPVSSLVHSSTLVAAGVWFVMRYDYLLGFSWLSIFFSVL 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 248 GCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMWILAMGYPKLAFFHLLAHALFKALLFMCAGSMIHNLKDSQDIRFMG 327
Cdd:MTH00063 227 LLLTIFITGVSSLFFSDLKKIVALSTCNNISWCVLYLIYGDVILSLFQLVSHGVSKCLLFMLVGDVMSGSGGSQSSNCVY 306
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 328 SIVHFMPLTSICFNVSSLSLCGMPFLAGFYSKDLILEMVCLSWTNCFIFFLYFFSTGSTASYSFRLFYYSMSGDNNyySS 407
Cdd:MTH00063 307 SSILYGSWNLFYLFLLVLGLSGVPFIGVFFSKHFLLSSFSSVVFNVSLLLVVILCVFLSYLYSFRLCLILFGVKSS--LS 384
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 288900672 408 FSFYDKGYYISFSMLSLLFIAVFGGSLLSwlifpipNMIVLPYYFKFLTILVVILGSYLGYLI 470
Cdd:MTH00063 385 SGVRFLFFNSGLMVFLWLFINYYVFLLLD-------EVVYLGVFISLVLLLVQLLGLLVGVLF 440
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
11-363 |
7.74e-37 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 142.81 E-value: 7.74e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 11 FMSTFVFILSIYYLLFDYSVFIEWELFSLNSsMVVMTFIFDWMSLIFMSFVMYISSLVIYYSEEYMfGESN--------M 82
Cdd:PRK06525 35 ALTTLCMLSLAYAFYQAGKVAVTLTLVNLGD-VALFGLVIDPVSVLIGFVVVLLGLLVTLYSTGYM-SPGNrehpvhegT 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 83 NRFIFIVLMIILSMALLIISPNLISILLGWDGLGLVFYCLVIYYQNVKSYSAGMLTALSNRIGDVSILISIAWMLNFGGW 162
Cdd:PRK06525 113 GRYYAFLLLFIGAMAGLVYSSTLLGLLLFFEITGLCSWALISYYQSPKALRSALKALLITHIGSLGLYLAAATLFLQTGT 192
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 163 NYIYYYDFISESfeMKIITMLIVL-ASMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDNY--N 239
Cdd:PRK06525 193 FALSALSGLHGS--LKYLVFLGILfAAWGKSAQLPFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARAIQSMGPIphV 270
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 240 FGWFLLLIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMWILAMGY--PKLAF----FHLLAHALFKALLFMCAGSM 313
Cdd:PRK06525 271 IGYVGAVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQLGYMFFGLSLAIlgSRLALegsiAYIFNHAFAKSLFFLVAGAL 350
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 288900672 314 IHNLkDSQDIRFMGSIVHFMPLTSICFNVSSLSLCGMPFLAGFYSKDLIL 363
Cdd:PRK06525 351 SYSC-GTRLLPRLRGVLKKLPLVGVGFCVAALAITGVPPFNGFFSKFPIF 399
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
183-366 |
8.85e-37 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 146.22 E-value: 8.85e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 183 LIVLASMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPML-DNYNFGWFLLLIGCMTMFMAGLGANF 261
Cdd:PRK12644 208 LILVGALSKSAIVPFHFWLPGAMAAPTPVSAYLHAAAMVKAGIYLVARLAPGFaDVPVWRPTVLVLGLATMLLGGWRALR 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 262 EFDLKKIIALSTLSQLGLMMWILAMGYPKLAFFHL---LAHALFKALLFMCAGSMIHNlKDSQDIRFMGSIVHFMPLTSI 338
Cdd:PRK12644 288 QHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLamlLAHALFKAALFLVVGIIDHS-TGTRDIRKLSGLGRRQPVLAV 366
|
170 180
....*....|....*....|....*...
gi 288900672 339 CFNVSSLSLCGMPFLAGFYSKDLILEMV 366
Cdd:PRK12644 367 VAALAAASMAGLPPLLGFVAKEAALEAV 394
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
51-366 |
4.16e-33 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 134.67 E-value: 4.16e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 51 DWMSLIFMSFVMYISSLVIYYSEEYMFGES-NMNRFIFIVLMIILSMALLIISPNLISILLGWDGLGLVFYCLVIY-YQN 128
Cdd:PRK12645 77 DGLSLLFALLITGIGSLVVLYSIYYLSKKKeQLGNFYVYLLLFMGAMLGVVLSDNLIVLYLFWELTSISSFLLISYwYER 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 129 VKSYSAGMLTALSNRIGDVSILISIAWMLNFGGWNYIYYY----DFISESFEMKIITMLIVLASMTKSAQIPFSSWLPAA 204
Cdd:PRK12645 157 EASRYGAQKSMLITVFGGLSMLGGFILLYIMTGSFSIREMianaDEIQNSPLFIPAMILILLGAFTKSAQFPFYIWLPDA 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 205 MAAPTPVSALVHSSTLVTAGVYLLIRFSPMldnynFG------WFLLLIGCMTMFMAGLGANFEFDLKKIIALSTLSQLG 278
Cdd:PRK12645 237 MEAPTPVSAYLHSATMVKAGIYLVARFTPI-----FAgsqvwfWTVTLVGLITLFWGSLNAVKQTDLKGILAFSTVSQLG 311
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 279 LMMWILAMGYPKL----------------AFFHLLAHALFKALLFMCAGSMIHNlKDSQDIRFMGSIVHFMPLTSICFNV 342
Cdd:PRK12645 312 LIMSLLGIGAASLhyqgddskiyaaaitaAIFHLINHATFKGSLFMIVGIVDHE-TGTRDIRKLGGLMTIMPITFTIALI 390
|
330 340
....*....|....*....|....
gi 288900672 343 SSLSLCGMPFLAGFYSKDLILEMV 366
Cdd:PRK12645 391 GALSMAGLPPFNGFLSKEMFFESM 414
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
39-364 |
5.17e-31 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 128.41 E-value: 5.17e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 39 LNSSMVVMTFIFDWMSLIFMSFVMYISSLVIYYSEEYMFGESNMNRFIFIVLMIILSMALLIISPNLISILLGWDGLGLV 118
Cdd:PRK12649 67 LPSAGVEFSIYADGLAVLIGLIASGIGVIIMSYSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLFIFWELTSIT 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 119 FYCLVIYYQNVKSYSAGMLTALsnRIGDVSILISIAWMLNFGGWNYIYYYDFISESFEM----------KIITMLIVLAS 188
Cdd:PRK12649 147 SFMLIGYWRHRPESVYGATKSL--LITAGGGLFMFAGFLLLHVITGTYDIATILQDSELienikghplfLITLILIFIGA 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 189 MTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDNYNfGWFLLL--IGCMTMFMAGLGANFEFDLK 266
Cdd:PRK12649 225 AAKSAQGPFYIWLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTE-AWFILVsgTGMITMVLAGFLAFRQTDIK 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 267 KIIALSTLSQLGLMMWILAMG---YPKLAF----FHLLAHALFKALLFMCAGSMIHNLKdSQDIRFMGSIVHFMPLTSIC 339
Cdd:PRK12649 304 AILAYSTISQLAYLMTMYGYTtyhEPGLGVaaatFHLLNHATFKACLFLVAGIVAHEAA-TRDIRKLGGLRKEMPITFIV 382
|
330 340
....*....|....*....|....*
gi 288900672 340 FNVSSLSLCGMPFLAGFYSKDLILE 364
Cdd:PRK12649 383 ASIAALAMAGIPPLNGFLSKEMFYE 407
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
47-364 |
7.01e-31 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 125.76 E-value: 7.01e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 47 TFIFDWMSLIFMSFVMYISSLVIYYSeeYMFGESNMNRFIFIVLMIILSMALLIISPNLISILLGWDGLGLVFYCLVIYY 126
Cdd:PRK08375 72 ELRADSLSALFLLVTSILAIAALLYA--IGYGEHRQTRFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAMG 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 127 QNVKSYSAGMLTALSNRIGDVSILISIAWMLNFGGW-NYIYYYDFISESFEMKIITMLIVLASMTKSAQIPFSSWLPAAM 205
Cdd:PRK08375 150 GDRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTlNMADLAGALAENPTVVTAFGFVLLALALKAAVFPLHTWLPRAY 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 206 AAPTPVSALVHSSTLVTAGVYLLIRFS------PMLDNYNFGWFLLLIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGL 279
Cdd:PRK08375 230 PAAPPVVTALLSGLVTKVAVYALIRIYftvfggDFRFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQMGY 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 280 MMWILAMGYPKL---AFFHLLAHALFKALLFMCAGSMIHNLKdSQDIRFMGSIVHFMPLTSICFNVSSLSLCGMPFLAGF 356
Cdd:PRK08375 310 ILLGLALLTPLAlaaGLLHLLHHALMKGALFLAAGAIEVTYG-TRRLSELSGLGRRMPLTAAAFAVASLSLIGVPPTSGF 388
|
....*...
gi 288900672 357 YSKDLILE 364
Cdd:PRK08375 389 VSKWYLVV 396
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
53-312 |
3.09e-30 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 124.43 E-value: 3.09e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 53 MSLIFMSFVMYISSLVIYYSEEYMFGESNMNRFIFIVLMIILSMALLIISPNLISILLGWDGLGLVFYCLVIYYQNVKsy 132
Cdd:PRK08168 70 LGLVMAALVQLLGWVIGRFSHRYLQGEPGQRRYVRALAGVLAAVHLLVLSDHLLVLIAAWAAISLALHRLLCFYPDRP-- 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 133 sAGMLTA----LSNRIGDVSILISIA-WMLNFGGWNYIYYYDFISE---SFEMKIITMLIVLASMTKSAQIPFSSWLPAA 204
Cdd:PRK08168 148 -FARLAAhkkfIADRLAELLLLAAAAlAYLEVGSLSLSALWAHLAAqgaSPSLQAAALLLVLAVILKTAQLPVHGWLIQV 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 205 MAAPTPVSALVHSStLVTAGVYLLIRFSPMLDNYNFG-WFLLLIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMWI 283
Cdd:PRK08168 227 MEAPTPVSALLHAG-VVNLGGFVLIRFAPLLEQAPPArWLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGFMLLE 305
|
250 260
....*....|....*....|....*....
gi 288900672 284 LAMGYPKLAFFHLLAHALFKALLFMCAGS 312
Cdd:PRK08168 306 CGLGLYELALLHLVAHSLYKAHAFLSASE 334
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
79-364 |
2.20e-24 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 106.57 E-value: 2.20e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 79 ESNMNRFIFIVLMIIL-SMALLIISPNLISILLGWDGLGLVFYCLVIYYQNVKSYSAGM-LTALSNrIGDVSILISIAWM 156
Cdd:PRK07234 89 ESAKTRFFYAQLLILHgSVNAAFVCADLISLYVALEVLSIATFLLVAYPRTDRAIWVGLrYLFYSN-VAMLFYLIGAVLV 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 157 LNFGGwnyiyYYDFISESFEMKIITMLIVLASMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLd 236
Cdd:PRK07234 168 YQANG-----TFAFSGLATADPEAFALIALGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDV- 241
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 237 nYNFGWFLLLIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGlmmWILAMgyPKLAFFHLLAHALFKALLFMCAGSmIHN 316
Cdd:PRK07234 242 -PGLDLIVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLG---FILAA--PLVGGLYALAHGLVKSTLFLCAGA-LPS 314
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 288900672 317 LKDSQDIRFMGSIVHFMPLTsicfnVSSLSLCGMPFLAGFYSKDLILE 364
Cdd:PRK07234 315 RNFTELISQMLGIGKWIPLT-----MASFSIAGFPLLAGFVSKVLTLK 357
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
93-369 |
7.65e-24 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 106.13 E-value: 7.65e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 93 ILSMALLIISPNLISILLGWDGLGLVFYCLVIYYQNVKS-YSAGMLTALSNRIGDVSILISIAWMlnfggWNYIYYYDFI 171
Cdd:PRK06521 123 LASMVLVLLADDAFSFLVAWETMSLSSWFLVIANHREAEiRRAGFLYLLMAHAGALAILLAFGLL-----ARESGSYDFA 197
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 172 S------ESFEMKIITMLIVLASMTKSAQIPFSSWLPAAM-AAPTPVSALVhSSTLVTAGVYLLIRFS-PMLDNYNFGW- 242
Cdd:PRK06521 198 AmraahlSPFWASLVFLLALFGFGAKAGLVPLHVWLPRAHpAAPSHVSALM-SGVMLKVAIYGILRVVfDLLGAPGWWWg 276
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 243 -FLLLIGCMTMFMAGLGANFEFDLKKIIALST-------LSQLGLMMWILAMGYPKLA-------FFHLLAHALFKALLF 307
Cdd:PRK06521 277 vLVLALGAISAVLGVLYALAEHDLKRLLAYSTienigiiFVGLGLAMVFIAYGMPLLAalaltaaLYHLLNHALFKSLLF 356
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 288900672 308 MCAGSMIHNLKdSQDIRFMGSIVHFMPLTSICFNVSSLSLCGMPFLAGFYSKDLILEMVCLS 369
Cdd:PRK06521 357 LGAGAVLHATG-TRDMEKLGGLIRRMPWTAWAFLIGCLAISALPPLNGFVSEWLLLQSLLSS 417
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
46-364 |
9.56e-24 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 105.58 E-value: 9.56e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 46 MTFIFDWMSLIFMSFVMYISSLVIYYSEEY---MFGESNMNRFIFIVLMIILSMALLIISPNLISILLGWDGLGLVFYCL 122
Cdd:PRK08667 71 ITFHIDRLAAFFIILIGLVSLCVAIYSLGYnehMSSNERANLLSALTALFILSMLGVVASANTFSFLFFWEIMALSSFFL 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 123 VIY-YQNVKSYSAGMLTALSNRIGDVSILISIAWMLNFGGwnyiyYYDFISESFEMKIITMLIVLASMT---KSAQIPFS 198
Cdd:PRK08667 151 VMNdYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTG-----SFELSPLGASAGILSLVFLLLFLGfgiKAGIIPFH 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 199 SWLPAAM-AAPTPVSALVhSSTLVTAGVYLLIRFspMLDNYN----FGWFLLLIGCMTMFMAGLGANFEFDLKKIIALST 273
Cdd:PRK08667 226 KWLPYAHpASPSNVSALM-SGVMLKVAVYGLVRF--LMDVLSpelwWGVLILLAGSISALLGVIYALKEHDLKGLLAYSS 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 274 LSQLGLMMW--------------ILAMGYPKLAFFHLLAHALFKALLFMCAGSMIHNLKDsQDIRFMGSIVHFMPLTSIC 339
Cdd:PRK08667 303 IENIGIILMgiglyvifgvygldTLALLALGGALFHSLNHALFKSLLFLTAGSVVHATGT-RNIEKMGGLVKLMPYTSAL 381
|
330 340
....*....|....*....|....*
gi 288900672 340 FNVSSLSLCGMPFLAGFYSKDLILE 364
Cdd:PRK08667 382 FLVGAVSIAALPPFNGFASELLLYE 406
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
48-366 |
4.58e-23 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 102.87 E-value: 4.58e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 48 FIFDWMSLIFMSFVMYISSLVIYYSEEYMFGESNMNRFIFIVLMIILSMALLIISPNLISILLGWDGLGLVFYCLVIYYQ 127
Cdd:PRK08376 86 WEVDLFGAFMALIATIVSFLAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFRN 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 128 NV-KSYSAGMLTALSNRIGDVSILISIAWML-NFGGWNYIYYYDFISESFEM--KIITMLIVLASMTKSAQIPFSSWLPA 203
Cdd:PRK08376 166 DTwEAIEAGIKYMFVGSLASSMVLLGIALLYgQYGTLNMAYLAVKMSENPTVvaKIALALFIAGLAMKSGAVPVHMWLPD 245
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 204 AM-AAPTPVSALVHSSTLvtAGVYLLIR-----FSPMLDNYNFGWFLLLIGCMTMFMAGLGANFEFDLKKIIALSTLSQL 277
Cdd:PRK08376 246 AYpAAPSSISAMLLVIKQ--AGLYALARvlfsiYGPAINLATVGWVIIILGCLTMFVGVAMAVVQKDVKRLLAYHSVSQI 323
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 278 GLMMW-----ILAMGYPKL----------AFFHLLAHALFKALLFMCAGSMIHNLkDSQDIRFMGSIVHFMPLTSICFNV 342
Cdd:PRK08376 324 GYMLLglgvgLAALGDPAMasygeialagGIYHIVNHALYKALLFLTAGAVIYET-GTRNLNELGGLARTMPKTTIAFLI 402
|
330 340
....*....|....*....|....
gi 288900672 343 SSLSLCGMPFLAGFYSKDLILEMV 366
Cdd:PRK08376 403 GAAAIVGLPPFNGFASKWLIYESS 426
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
140-358 |
1.04e-22 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 102.30 E-value: 1.04e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 140 LSNRIGDVSILISIAWMLNF-GGWNYIYYYDFIS-ESFEMKIITML---IVLASMTKSAQIPFSSWLPAAMAAPTPVSAL 214
Cdd:PRK07390 178 LTKRVGDLLLLMGVVALSPLaGTLNFSDLAAWAAtANLDPLTATLLglaLIAGPTGKCAQFPLHLWLDEAMEGPNPASIL 257
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 215 vHSSTLVTAGVYLLIRFSPMLDNYNFGW-FLLLIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMWILAMGYPKLAF 293
Cdd:PRK07390 258 -RNSVVVATGAWVLIKLQPVLALSPVALtVLIVIGTVTAIGASLVAIAQIDIKRALSYSTSAYLGLVFIAVGLQQPDIAL 336
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 288900672 294 FHLLAHALFKALLFMCAGSMIHNlKDSQDIRFMGSIVHFMPLTSICFNVSSLSLCGMPFLAGFYS 358
Cdd:PRK07390 337 LLLLTHAIAKALLFMSVGSIILT-TITQDLTELGGLWSRMPATTLAFLVGSAGLVALLPLGGFWA 400
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
55-429 |
1.46e-22 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 101.05 E-value: 1.46e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 55 LIFMSFVMYISSLVIYYSEEYMFGES--NMNRFIFIVLMIILSMALLIISPNLISILLGWDGLGLVFYCLVIYYQNVKSY 132
Cdd:PRK06589 86 LIFLLLIGFLWICALLYTPKYLAINNidSSSRFLFFFNLTILIGVLIALSSDLFTMFVCYELLTISTAFLIGHTRNNISL 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 133 SAGmLTALSNRIGDVSILISIAWMLNFGGWNYIYYYDFISESFEMKIITMLIVLASMTKSAQIPFSSWLPAAMAAPTPVS 212
Cdd:PRK06589 166 SGG-YKYLKILMISALLLFLPAVILIYTKTGNLDFVSGGLFSKNQSIILLLMFIYGIAKTAIFPVHSWLPAAMVAHYPVS 244
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 213 ALVHSSTLVTAGVYLLIRFSPM---LDNYN-----FGWfLLLIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMWIL 284
Cdd:PRK06589 245 ALLHAVIVVKTGLFCIYKILLYifgLSYLQrifaeFNW-LIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLSLALLSA 323
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 285 AMGYPK---LAFFHLLAHALFKALLFMCAGSmIHNLKDSQDIRFMGSIVHFMPLTSICFNVSSLSLCGMPFLAGFYSKDL 361
Cdd:PRK06589 324 FILTPKalgAAILHLVSHSFAKICLFYSMGS-IYSLKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFL 402
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 288900672 362 ILEMVCLS---WTNCFIFFLYFFSTGSTASYSFRLFYysmsgdNNYYSSFsfyDKGYYISFSMLSLLFIAV 429
Cdd:PRK06589 403 ILLAASEQnqpWLSIIVMLVVIASSILSALYLLKILS------SIYKPSL---SENSFITKSLPYLMQISV 464
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
36-312 |
7.90e-20 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 92.79 E-value: 7.90e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 36 LFSLNSSMVVMTFIFDWMSLIFMSFVMYISSLVIYYSEEYMFGESNMnRFIFIVLMIILSMALLI-ISPNLISILLGWdg 114
Cdd:PRK08601 56 LIGANGDVVVGPWHLDTLAWLMAFFVLTLGFIIQRFSVRYLLGDRSY-RKYFALFTFTTGFASLAwLSGDLRLMALCW-- 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 115 lGLVFYCLVIYYQNVKSY----SAGMLTALSNRIGDVSILISIAWM-LNFGGWnyiYYYDFISE-------SFEMKIITM 182
Cdd:PRK08601 133 -GATLLGLTLLIGLNKGWkvarEAAKISGMLFLISWLALALAIVWLfIATGEW---QLTSVLSNenlaqlgTWEKTGINL 208
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 183 LIVLASMTKSAQIPFSSWLPAAMAAPTPVSALVHSStLVTAGVYLLIRFSPMLDNyNFGWFLLLIGCMTMFMAGLGANF- 261
Cdd:PRK08601 209 LLILAVMIPAAQWPFQRWLIESAVAPTPVSAIMHAG-LVNAGGIMLTRFSPLFHD-DIAQILLLIFASISVLIGTGISLv 286
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 288900672 262 EFDLKKIIALSTLSQLGLMMWILAMGYPKLAFFHLLAHALFKALLFMCAGS 312
Cdd:PRK08601 287 QVDYKRQLVGSTMAQMGFMLVQCALGAYSAAIIHLILHGLFKATLFLQSGS 337
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
183-393 |
6.96e-19 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 89.83 E-value: 6.96e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 183 LIVLASMTKSAQIPFSSWLPAA-MAAPTPVSALVhSSTLVTAGVYLLIRFSPMLDNYN----FGWFLLLIGCMTMFMAGL 257
Cdd:PRK08377 211 LLIFGLAVEAELFPLNAWAPDAyQAAPHPITVMF-SAFVVKAGLYAMARILYLMQNANgwssVLKLVIIMATLTVFFAEL 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 258 GANFEFDLKKIIALSTLSQLGLMMWILAMGYP---KLAFFHLLAHALFKALLFMCAGSMIHNLKDSQDIRFMGsIVHFMP 334
Cdd:PRK08377 290 SALRQKNVKRMIAYSSIGQVGMIALALALGTQagvDAGVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEG-LGKRMP 368
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 288900672 335 LTSICFNVSSLSLCGMPFLAGFYSKDLILeMVCLSWTNCFIFFLYFFSTGSTASYSFRL 393
Cdd:PRK08377 369 LTALALTIGALSTVGIPLFNVFWSKFRII-LAGLSAGYTWPVALVLGASVVEAVYYFRL 426
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
179-395 |
8.50e-19 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 89.65 E-value: 8.50e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 179 IITMLIVLASMTKSAQIPFSSWLPAAM-AAPTPVSALVhSSTLVTAGVYLLIRFSPML--DNYNFGWFLLLIGCMTMFMA 255
Cdd:PRK12667 224 VALALALWAFTIKAAIFPNHFWLPDAHpAAPSPVSAML-SGLVVNVGAYAIIRFLYTIfgISPSLIDFRAALSPILIILG 302
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 256 GLGA-------NFEFDLKKIIALSTLSQLGLMMWILAMGYP---KLAFFHLLAHALFKALLFMCAGSMIHNLKdSQDIRF 325
Cdd:PRK12667 303 AVSAiigalmmVVQKDVKRLLAYSTISHMGYIFMGIGIGTQlglAAALFHIINHAIAKSLLFLASGVFIHAAG-TRDIDE 381
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 326 MGSIVHFMPLTSICFNVSSLSLCGMPFLAGFYSKDLILEMVCLSWTNCFIFFLYFFSTGSTASYsFRLFY 395
Cdd:PRK12667 382 LAGLGRKMPIASFAFLIGALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVLLIASAISLVGY-FRAWY 450
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
105-363 |
2.90e-18 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 88.41 E-value: 2.90e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 105 LISILLGWDGLGLVFYCLVIYYQNVKSYSAGMLTALSNRIGDVSILISIAWMLNFGGwnyiyYYDFISESFEMKIITMLI 184
Cdd:PRK12668 115 LLTLFVFWELMAFTSTFLVWARGTKAAVRAGFRYLLVHVLGGVLLLAGILLHYAETG-----SFAFGAIAGLGGTAAWLI 189
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 185 VLASMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRfspmldnyNFGWFLLLIGcMTMFMAGLGANF--- 261
Cdd:PRK12668 190 LIGFGVNAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALAR--------AFPGTELLIY-IGAAMAVYGVFFall 260
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 262 EFDLKKIIALSTLSQLGLMMWILAMGYPKL---AFFHLLAHALFKALLFMCAGSMIHNLKDSqDIRFMGSIVHFMPLTSI 338
Cdd:PRK12668 261 ENDLRRLLSYHIVSQVGYMVAGIGIGTALAingAVAHAFNHILYKGLLFMSAGAVLYRTGTE-KLTELGGLYRSMPLTAL 339
|
250 260
....*....|....*....|....*
gi 288900672 339 CFNVSSLSLCGMPFLAGFYSKDLIL 363
Cdd:PRK12668 340 FCLVGALSISAFPLFSGFVSKSMII 364
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
196-363 |
5.98e-16 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 80.51 E-value: 5.98e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 196 PFSSWLP-AAMAAPTPVSALvHSSTLVTAGVYLLIRFS-PMLDN--YNFGWFLLLIGCMTMFMAGLGANFEFDLKKIIAL 271
Cdd:COG1008 227 PFHTWLPdAHVEAPTAGSVL-LAGVLLKMGGYGLLRFAlPLFPEasAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAY 305
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 272 STLSQLGLMMWILAMGYP---KLAFFHLLAHALFKALLFMCAGSMIHNLKdSQDIRFMGSIVHFMPLTSICFNVSSLSLC 348
Cdd:COG1008 306 SSVSHMGFVLLGIFALNPlglQGAVLQMVSHGLITAALFLLVGVLYDRTH-TRDIADLGGLAKRMPVLAALFLLAALASL 384
|
170
....*....|....*
gi 288900672 349 GMPFLAGFYSKDLIL 363
Cdd:COG1008 385 GLPGTSGFVGEFLVL 399
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
11-395 |
1.51e-15 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 79.66 E-value: 1.51e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 11 FMSTFVFILSIYYLLFDYSVFI-EWELFSLNSSMVVMTFIFDWMSLIFMSFVMYISSLVIYYSEEYmfGESNMNRFIFIV 89
Cdd:PRK08668 27 IGVIGNALPLLFLIKLYFTLKVgTGEKLTLFFGGFKLTFTLTHLSWFFAMISLLVIFSVAFFMVSE--KTKNDAYFNMFA 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 90 LMIILSMALLIISPNLISILLGWDGLGLVFYcLVIYYQNVKSYSAGMLTALSNRIGDVSILISIAWMLN-FGGWNYIYYY 168
Cdd:PRK08668 105 LMSLAGVLGVFLANDLLTLYIFWEIMTFSSF-MMVPMGKKESRKASLKYFVLSAIGAYAMLYAIFLIYAkTGTFDFADIS 183
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 169 DFISE--SFEMK-IITMLIVLASMTKSAQIPFSSWLPAAMA-APTPVSAlVHSSTLVTAGVYLLIRFSPMLDNYN----- 239
Cdd:PRK08668 184 QGLINdtSTGFAlIVFLFLLAFGVAKAGIFPLHVWAPDAYSeAPQSFSA-VLSGQLSKLGAYGFLLVLYVLPGTKlfsef 262
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 240 --------FGWFLLLIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMWILAMGYP---KLAFFHLLAHALFKALLFM 308
Cdd:PRK08668 263 gtyrgvplFNYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSlgfAGGLFHVFNHALFKGLFFL 342
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 309 CAGSMIHNLKDSQdIRFMGSIVHFMPLTSICFNVSSLSLCGMPFLAGFYSKDLILEMVcLSWTNCFIFFLYFFSTGSTAS 388
Cdd:PRK08668 343 IFAAVIYRTGTTK-ISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEAL-ISKGMPITAFMAFFGSIGSFL 420
|
....*..
gi 288900672 389 YSFRLFY 395
Cdd:PRK08668 421 YVFRPLA 427
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
195-356 |
4.36e-14 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 75.25 E-value: 4.36e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 195 IPFSSWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRFSPMLDNYNFGW--FLLLIGCMTMFMAGLGANFEFDLKKIIAL 271
Cdd:PRK08042 197 IPLHGWVPQAHAnASAPAAALF-STVVMKIGLLGILTLSLLGGNAPLWWgvALLVLGMITAFVGGLYALMEHNIQRLLAY 275
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 272 STLSQLGLMMWILAMGYPKLA--------------FFHLLAHALFKALLFMCAGSMIHNlKDSQDIRFMGSIVHFMPLTS 337
Cdd:PRK08042 276 HTLENIGIILLGLGAGVTGIAleqpalialglvggLYHLLNHSLFKSVLFLGAGSVWFR-TGHRDIEKLGGIGKKMPVIS 354
|
170
....*....|....*....
gi 288900672 338 ICFNVSSLSLCGMPFLAGF 356
Cdd:PRK08042 355 IAMLVGLMAMAALPPLNGF 373
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
47-359 |
1.44e-13 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 73.23 E-value: 1.44e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 47 TFIFDWMSLIFMSFVMYISSLVIYYSEEYMFGEsNMNRFIFIVLMI--ILSMALLIISPNLISILLGWDGLGLVFYCLV- 123
Cdd:COG1007 65 MFVVDGFALFFKLLILLAALLVLLLSRDYLERR-GLLRGEFYALLLfaTLGMMLMASANDLLTLFLGLELLSLSLYVLVa 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 124 IYYQNVKSYSAGM----LTALSNRIgdvsILISIAWMLNFGGwnyIYYYDFISESFEMKIITMLIVLASMT--------K 191
Cdd:COG1007 144 FRRDDRRSSEAALkyflLGALSSGF----LLYGISLLYGATG---SLNLAGIAAALAAGGANSPLLLLGLVlvlaglafK 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 192 SAQIPFSSWLP-AAMAAPTPVSALVhsSTLV-TAGVYLLIR-FSPMLDNYNFGWFLLL--IGCMTMFMAGLGANFEFDLK 266
Cdd:COG1007 217 LSAVPFHMWTPdVYEGAPTPVTAFL--ATAPkIAAFAALLRlLVEAFPGLAADWQLLLavLAVLSMTVGNLAALAQTNVK 294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 267 KIIALSTLSQLGLMMWILAMGYP---KLAFFHLLAHALFKALLFMCAGSMIHNLKDSQDIRFMGSIVHFMPLTSICFNVS 343
Cdd:COG1007 295 RMLAYSSIAHAGYLLLGLAAGTPlgvSAALFYLLAYLFMNLGAFAVILLLSRKGGEAEEIEDLAGLARRSPLLALAMTIF 374
|
330
....*....|....*.
gi 288900672 344 SLSLCGMPFLAGFYSK 359
Cdd:COG1007 375 LLSLAGIPPTAGFFGK 390
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
176-363 |
6.03e-13 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 71.13 E-value: 6.03e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 176 EMKIITMLIVLASMTKSAQIPFSsWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPML---DNYNFGWFLLLIGCMTM 252
Cdd:PRK12663 205 TLTTIALLFLLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLfpqERELLHPLLATMAAITM 283
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 253 FMAGLGANFEFDLKKIIALSTLSQLGLMMWILAMGYPKL---AFFHLLAHALFKALLFMCAGSMIHnLKDSQDIRFMGSI 329
Cdd:PRK12663 284 VIGALGALAYKDIRRIAGYQVISSIGFILLGLALGTPAGingAIFYLVHDMVVKTALFLIAGSLVR-LTGYRSLQYLGGL 362
|
170 180 190
....*....|....*....|....*....|....
gi 288900672 330 VHFMPLTSICFNVSSLSLCGMPFLAGFYSKDLIL 363
Cdd:PRK12663 363 YRKEPLFGALFLILIFAIGGLPPFSGFWGKVLLV 396
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
177-364 |
1.36e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 69.98 E-value: 1.36e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 177 MKIITMLIVLASMTKSAQIPFSSWLPAA-MAAPTPVSALVhSSTLVTAGVYLLIRFSPMLDNYNFGW---FLLLIGCMTM 252
Cdd:PRK07691 208 ITVVAILFLFVFATKAGLFPLYFWLPGSyYAPPIAIAALF-GALLTKVGVYAIARTFTLFFSHDTSFthyLILILALLTI 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 253 FMAGLGANFEFDLKKIIALSTLSQLGLMMWILAMGYPKL---AFFHLLAHALFKALLFMCAGSMIHnLKDSQDIRFMGSI 329
Cdd:PRK07691 287 IFGVIGAVAYFDIKKIIIYNIMIAVGVILVGVAMMTESGmigAIYYLIHDMIVKAALFLLIGIMIK-ITGTTDLKKMGGL 365
|
170 180 190
....*....|....*....|....*....|....*
gi 288900672 330 VHFMPLTSICFNVSSLSLCGMPFLAGFYSKDLILE 364
Cdd:PRK07691 366 IKRYPVLGWMFFIAALSLAGIPPLSGFYGKFFIVE 400
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
191-364 |
1.01e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 67.30 E-value: 1.01e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 191 KSAQIPFSSWLPAAM-AAPTPVSAlVHSSTLVTAGVYLLIRFSPMLDNYNFGW-FLLLIGCMTMFMAGLGANFEFDLKKI 268
Cdd:PRK12665 222 KAAVFPLSFWLPDSYpTAPAPVTA-VFAGLLTKVGVYAIIRTHTLLFPGGGLDtLLMVVALLTMVVGILGAIAQSDIKRL 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 269 IALSTLSQLGLMMWILAMGYPK---LAFFHLLAHALFKALLFMCAGsMIHNLKDSQDIRFMGSIVHFMPLTSICFNVSSL 345
Cdd:PRK12665 301 LSFTLVSHIGYMVFGIALSTVAglsGAIYYVAHHITVQTTLFLVVG-LIERQAGSSSLRRLGGLAKASPLLAVLFFVPAL 379
|
170
....*....|....*....
gi 288900672 346 SLCGMPFLAGFYSKDLILE 364
Cdd:PRK12665 380 NLGGIPPFSGFIGKVALLE 398
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
182-363 |
1.43e-11 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 66.70 E-value: 1.43e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 182 MLIVLASMTKSAQIPFSSWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRFSPMLDNY----NFGWFLLLIGCMTMFMAG 256
Cdd:PRK08676 210 LFIFIGFLAKSGLVPFHTWLPAAYAkAPSVVSALL-SGTVLNIGIYGILRLSALLRQSgaaeQFSNVLIGLGIFSIAVAA 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 257 LGANFEFDLKKIIALSTLSQLGLMMWILAMGYPKLAF---FHLLAHALFKALLFMCAGsMIHNLKDSQDIRFMGSIVHFM 333
Cdd:PRK08676 289 FSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFwmlFHMLAHSLVKSGLFFSAG-ILHRQYRSDRFDRIFDVFRLQ 367
|
170 180 190
....*....|....*....|....*....|
gi 288900672 334 PLTSICFNVSSLSLCGMPFLAGFYSKDLIL 363
Cdd:PRK08676 368 PVAAWGVILGSAAIIGMPPFPLFLSKFFIL 397
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
190-363 |
2.26e-11 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 66.11 E-value: 2.26e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 190 TKSAQIPFSSWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRFSPMLD---NYNFGWFLLLI-GCMTMFMAGLGANFEFD 264
Cdd:PRK06458 226 TKVGLFPMHAWLPDAHSeAPSPVSALL-SGVLLNVALYAVLRYYILIDaaiGSDFPGRLLLIfGLLSVLVAAFFLLRQRD 304
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 265 LKKIIALSTLSQLGLMMWILAMGYPkLAFF----HLLAHALFKALLFMCAGSMIHNlKDSQDIRFMGSIVHFMPLTSICF 340
Cdd:PRK06458 305 IKRLFAYSSIEHMGLIAFALGIGGP-LGIFaallHMLNHSLTKSAIFFASGNVLQK-YGTRDINVIRGLLKVSPLTGWGL 382
|
170 180
....*....|....*....|...
gi 288900672 341 NVSSLSLCGMPFLAGFYSKDLIL 363
Cdd:PRK06458 383 MLGALAIAGMPPFGVFISEFLIL 405
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
87-394 |
3.65e-11 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 65.35 E-value: 3.65e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 87 FIVLMIILSMALLII--SPNLISILLGWDGLGLVFYCLVIYYQNVKSYSAGMLTALSNRIGDVSILISIAWMLNFGGWNY 164
Cdd:TIGR01972 108 FYALLLLLEAGVIGVflALDLFLFYVFWEAMLIPMYLLIGVWGGPNRIYAAMKFFLYTLAGSLLMLLAILGLYFLGGGTF 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 165 IY--YYDFISESFEMKIITMLIVLASMTKSAQIPFSSWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRFS-PMLDNYN- 239
Cdd:TIGR01972 188 DLleLLNLPLPFGVQTWLFLAFFIAFAVKVPLFPLHTWLPDAHVeAPTAGSVIL-AGVLLKMGTYGFLRFNlPLFPDASl 266
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 240 -FGWFLLLIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMWILAMGYP---KLAFFHLLAHALFKALLFMCAGsMIH 315
Cdd:TIGR01972 267 yFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLLGIFSFNElgiSGAVFQMISHGLITAALFLLVG-VLY 345
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 288900672 316 NLKDSQDIRFMGSIVHFMPLTSICFNVSSLSLCGMPFLAGFYSKDLILemVCLSWTNCFIFFLYFFSTGSTASYSFRLF 394
Cdd:TIGR01972 346 ERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEFLIL--LGSFKVNPVVAFLAALGIVLAAAYMLTLY 422
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
195-363 |
4.01e-11 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 65.61 E-value: 4.01e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 195 IPFSSWLPAAMA-APTPVSALvHSSTLVTAGVYLLIRFS-PMLDNY--NFGWFLLLIGCMTMFMAGLGANFEFDLKKIIA 270
Cdd:PRK05846 228 FPLHTWLPDAHVqAPTAGSVL-LAGILLKMGAYGLLRFSlPLFPDAshEFAPIIITLGVIAIIYGALVALAQTDIKKLIA 306
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 271 LSTLSQLG-LMMWILAMGYPKL--AFFHLLAHALFKALLFMCAGSMIHNLKdSQDIRFMGSIVHFMPLTSICFNVSSLSL 347
Cdd:PRK05846 307 YSSISHMGfVTLGIFAGNQLGIqgAIFQMISHGLSSAALFLLVGVLYDRLH-TRDIADYGGLAKVMPVLAAFFLFFAMAS 385
|
170
....*....|....*.
gi 288900672 348 CGMPFLAGFYSKDLIL 363
Cdd:PRK05846 386 LGLPGTSGFVGEFLIL 401
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
47-359 |
1.38e-07 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 54.06 E-value: 1.38e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 47 TFIFDWMSLIFMSFVMYISSLVIYYSEEYMfGESNMNRFIFIVLMIILSMALLIISPNLISILLGWDGLGLVFYCLVIY- 125
Cdd:PRK05777 68 MLVVDGFALFLKGLILLASLLALLLARPYL-EDRGRGEFYLLVLFALLGMMVMVSANDLLTLFLGLELLSLPLYALAALr 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 126 YQNVKSYSAGM----LTALSNRIgdvsILISIAWMLNFGGwnyIYYYDFISESFEMKIITMLIVLASMT--------KSA 193
Cdd:PRK05777 147 RDRRRSLEAAIkyfvLGALASGF----LLYGMSLLYGATG---SLSFAGIAKALADGSGNSLLLLFGLVfllvglafKLS 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 194 QIPFSSWLPAAM-AAPTPVSALVHSSTLVtAGVYLLIRFSPM-LDNYNFGWFLLLIGC--MTMFMAGLGANFEFDLKKII 269
Cdd:PRK05777 220 AVPFHMWTPDVYeGAPTPVTAFLATAPKI-AAFAVLLRLLVVaFGGLSEDWQQVLAIIaiASMLVGNLAALSQTNIKRLL 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 270 ALSTLSQLGLMMWILAMGYP---KLAFFHLLAHALFKALLFMCAGSMIHNLKDSQDIRFMGSIVHFMPLTSICFNVSSLS 346
Cdd:PRK05777 299 AYSSIAHAGYLLVGLAAGTAegySAVLFYLLAYLFMTLGAFGVISLLRRKGGEAESISDFAGLSKRSPLLAAVMTIFMLS 378
|
330
....*....|...
gi 288900672 347 LCGMPFLAGFYSK 359
Cdd:PRK05777 379 LAGIPPTAGFWGK 391
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
177-359 |
1.55e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 53.97 E-value: 1.55e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 177 MKIITMLIVLASMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDNYNFGWFLLLIGCMTMFMAG 256
Cdd:PRK12662 208 IQIGVLFIMVGLFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVYDVFKANFVFTTLPFNNVFMILAA 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 257 LG-------ANFEFDLKKIIALSTLSQLGLMMWILAMG-YPKL--AFFHLLAHALFKALLFMCAGSMIHNLkDSQDIRFM 326
Cdd:PRK12662 288 LAivfgsvlAILSKDIKRIFAYSSISHIGYIILAVSLNtYYGLaaAVAYIVNHSIVKSALFMVSGSISYHF-GTTKLEDC 366
|
170 180 190
....*....|....*....|....*....|...
gi 288900672 327 GSIVHFMPLTSICFNVSSLSLCGMPFLAGFYSK 359
Cdd:PRK12662 367 LNLWKSMPKITLAFVLLSLSLIGMPPTSGFVAK 399
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
182-363 |
2.68e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 50.23 E-value: 2.68e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 182 MLIVLASMTKSAQIPFSSWLPAA-MAAPTPVSALVHSSTLVtaGVYLLIRFSPML------DNYNFGWFLLLIGCM-TMF 253
Cdd:PRK12666 214 ALLLVVFLIKAAMWPLNFWLPPAyAAASAPVAALFAIMTKV--GIYAILRLSTLLfgpeagASAGFGQDWLLPGGLaTLA 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 254 MAGLGANFEFDLKKIIALSTLSQLGLMMWILAMGYPKL---AFFHLLAHALFKALLFMCAGSM----------------I 314
Cdd:PRK12666 292 FGAIGVLAAQRLRRLAAYLVLVSSGTLLAAIGLGNPAAtaaALYYLVHSTLAAAALFLLADLVerqrgaaadrlavtpeL 371
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 288900672 315 HNLKDSQDIRFMGSIVHFMPLTSICFNVSSLSLCGMPFLAGFYSKDLIL 363
Cdd:PRK12666 372 YDLDEEEEEEVGVAIPATMALLGLLFFICALALAGLPPLSGFLGKFALL 420
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
14-364 |
9.72e-06 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 48.25 E-value: 9.72e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 14 TFVFILSIYYLLFDYSVF---IEWELFSLNSSMVVMTFIFDWMSliFMSFVMYISSLVIYYSEEYMFGESNMNRFIFIVL 90
Cdd:PRK06459 1 TLLYILPVFLISILLSIFnkkASYILTMISSIILLITSIYEYNG--VLSFFSIISTIVWILASLYSIEYDHYGKWLSSLY 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 91 MI-ILSMALLIISPNLISILLGWDGLGLVFYCLVIYYQNvKSYSAGMLTALSNrigdvsilISIAWMLNFGGWNYIYYYD 169
Cdd:PRK06459 79 ILtILGMAIVLTSDNYLLFLAGWEIMTIPSYVAIALTKK-NKRPAFVFMAFGE--------LSTVLILAGFAWAFIISGT 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 170 FISESFEMKIITMLIVLASMTKSAQIPF--SSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIR---FSPMLDNYNFGWFL 244
Cdd:PRK06459 150 TNFSYLPSPVPLILASFGFIIKMGMMPFlvSEWLPIAHGNAPSNFSAILSATMTLMGVYGILKmtiLTQTIPIGYFGLTI 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 245 LLIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMWILAM------------GYPKLA-FFHLLAHALFKALLFMCAG 311
Cdd:PRK06459 230 LAIGAFSILFGALYAYVSENVKGLLAFSTIENNGAILVALGLymvtkqlitsieHFSLITvILYSFAHSVAKTGLFLSSG 309
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|...
gi 288900672 312 SMihnlkDSQDIRFMGSIVHFMplTSICFNVSSLSLCGMPFLAGFYSKDLILE 364
Cdd:PRK06459 310 LQ-----EKQSITYSKKIRNRW--IELGLTLLASSLSGLLPNIGGVASWLLLE 355
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
181-364 |
1.18e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 47.51 E-value: 1.18e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 181 TMLIVLASMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDNYnfgwFLLLIGCMTMFMAGLGAN 260
Cdd:MTH00112 95 CTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPT----LLLTLAILSTLIGGWGGL 170
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 261 FEFDLKKIIALSTLSQLGLMMWILAMGyPKLAFFHLLAHALFKALLFMcagsMIHNLKdSQDIRFMGSIVHFMPLTSICF 340
Cdd:MTH00112 171 NQTQLRKIMAFSSIAHLGWMIAIITYS-PKLTLLTFYIYILMTTPMFL----TLNTTS-TKTLKDMMTSWTKSPTLNTTL 244
|
170 180
....*....|....*....|....
gi 288900672 341 NVSSLSLCGMPFLAGFYSKDLILE 364
Cdd:MTH00112 245 MLTLLSLAGLPPLTGFMPKWLILQ 268
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
46-364 |
1.54e-05 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 47.72 E-value: 1.54e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 46 MTFIFDWMSLIFMSFVMYISSLVIYYSeeymFGESNMN-RFIFIVLMIILSMALLIISPNLISILLGWDGLGLVFYCLVI 124
Cdd:PRK06277 66 ITYLFNPAKQIIIFVLSLIASLVLITG----LGEKKSSgLYVFLMLMGLASVSAIVLADDIFNLYVFFEIAAIVQVGLVI 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 125 YYQNVKSYSAGMLTALSNRIGDVSILISIAWMLNFGG---WNYIYYYDFISESFEMKIITMLIVLASMTKSAQIPFSSWL 201
Cdd:PRK06277 142 ASGTEEAYKAALKYMILGNVAGSILLLGIGFLLASTGtlnITDIHNALLVNPTSPVIYGGLLLLIFGLLYGSGLPPFHTI 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 202 PAAMAAPTP--VSALVHSS---TLVTAGVYLLIRFSPMLDNYNFGWFLLLIGCMTMFMAGLGANFEFDLKKIIALSTLSQ 276
Cdd:PRK06277 222 KSDIYAKAKpfGSALLQTFskfVLVALMLVIFKLFGGLSYFPSAQGVLIALSVLAMVFGVVMALLQTDYKRLLAYHAISQ 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 277 LGLMMWILAMGYP---KLAFFHLLAHALFKALLFMCAGSmIHNLKDSQDIRFMGSIVHFMPLTSICFNVSSLSLCGMPFL 353
Cdd:PRK06277 302 GGYVAAGLALGTPlgiVAGIFHAINHVIYKSALFLGAGI-VSYRTKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPPF 380
|
330
....*....|.
gi 288900672 354 AGFYSKDLILE 364
Cdd:PRK06277 381 NGFQSKLMLAQ 391
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
9-359 |
4.95e-05 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 46.15 E-value: 4.95e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 9 LFFMSTFVFILSIYYLLFdysvfiEWELFSLNSSMvvMTFIFDWMSLIFMSFVMYISSLVIYYSEEYM-FGESNMNRFIF 87
Cdd:CHL00049 44 LYFISSTSLVMSITALLF------QWREEPMISFS--GNFQTNNFNEIFQFLILLCSTLCIPLSVEYIeCTEMAITEFLL 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 88 IVLMIILSMALLIISPNLISILLGWDGLGLVFYCLVIYY-QNVKSYSAGMLTALSNRIGDVSILISIAWM--LNFGGWNY 164
Cdd:CHL00049 116 FVLTATLGGMFLCGANDLITIFVALECLSLCSYLLSGYTkKDVRSNEATMKYLLMGGASSSILVYGFSWLygLSGGEIEL 195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 165 IYYYDFISESFEMKIITMLIVLASMT-----KSAQIPFSSWLPAAM-AAPTPVSALVhSSTLVTAGVYLLIRFSPMLDNY 238
Cdd:CHL00049 196 QEIVNGLINTQMYNSPGISIALIFITvgigfKLSLAPFHQWTPDVYeGSPTPVVAFL-SVTSKVAASALATRIFDIPFYF 274
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 239 -NFGWFLLL--IGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMWILAMGYPKLAFFHLLAHALFkaLLFMCAGS--- 312
Cdd:CHL00049 275 sSNEWHLLLeiLAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNDGYASMITYMLF--YIFMNLGTfac 352
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 288900672 313 -MIHNLKDSQD-IRFMGSIVHFMPLTSICFNVSSLSLCGMPFLAGFYSK 359
Cdd:CHL00049 353 iVLFGLRTGTDnIRDYAGLYTKDPFLALSLALCLLSLGGIPPLAGFFGK 401
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
91-363 |
7.29e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 45.41 E-value: 7.29e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 91 MIILSMALLIISPNLISILLGWDGLGLVFYCLVIYYQN-VKSYSAGMLTALSNRIGDVSILISIAWMLNFGGWNYIYYYD 169
Cdd:MTH00196 1 MVALGILCLISSSNWLSVYLAIELQTLSLFILIAQNRGsGYSAEAGLKYFVLGALSSGLFLFGCALLCGTTGGLHLSYIN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 170 FISE------SFEMKIITMLIVLASMTKSAQIPFSSWLPAAM-AAPTPVSALVhsSTLVTAGVY-LLIRFSPMLDnynfg 241
Cdd:MTH00196 81 LVLNsgqsfsSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYeGAPTKTTALL--AIVPKLGIFsILVSIGLNVN----- 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 242 wFLLLIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMWILAMGY---PKLAFFHLLAHALFKALLFMCAgsMIHNLK 318
Cdd:MTH00196 154 -ILLIGGLFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSfesIQASLVYLFIYIIMSICVFSII--LALNVY 230
|
250 260 270 280
....*....|....*....|....*....|....*....|....*
gi 288900672 319 DSQDIRFMGsIVHFMPLTSICFNVSSLSLCGMPFLAGFYSKDLIL 363
Cdd:MTH00196 231 KNLIIEFSG-LSRRLPILAITLALTFLSIAGIPPLVGFLGKWLIL 274
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
191-358 |
3.92e-04 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 43.10 E-value: 3.92e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 191 KSAQIPFSSWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRFS-PMLDNYN--FGWFLLLIGCMTMFMAGLGANFEFDLK 266
Cdd:PRK12561 198 KLPIFPLHTWLPDAHGeASAPVSMIL-AGVLLKMGGYALIRFNvQMLPDAHvyFAPALAILGVVNIIYGALNAFAQDNVK 276
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 267 KIIALSTLSQLGLMMWILAmGYPKL----AFFHLLAHALFKALLFMCAGSMIHNLKdSQDIRFMGSIVHFMPLTSICFNV 342
Cdd:PRK12561 277 RRLAYSSVSHMGFVLLGIA-AFTDLgisgAMLQMISHGLIAAALFFLTGVTYERTH-TLSIPNMGGLAKVMPKTFALFTA 354
|
170
....*....|....*.
gi 288900672 343 SSLSLCGMPFLAGFYS 358
Cdd:PRK12561 355 SSMASLALPGMSGFVS 370
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
151-440 |
9.04e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 41.88 E-value: 9.04e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 151 ISIAWMLNFGGWNYIYYYDFISESFEMKIITMLIVLASMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIR 230
Cdd:MTH00200 65 TASALLLFGGLLNAWTSGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQ 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 231 FSPMLDNynfgWFLLLIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMWILAMGyPKLAFFHLLAHALFKALLFMca 310
Cdd:MTH00200 145 LAPALNS----NILLLLGLLSVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYS-PNLALLYLLLYVIITLTVFL-- 217
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 311 gsmIHNLKDSQDIRFMGSIVHFMPLTSICFNVSSLSLCGMPFLAGFYSKDLILemvclswTNCFIFFLYFFSTGSTASYS 390
Cdd:MTH00200 218 ---LLNLLNSTKINSLSSSKTKNPILSMLLGLTLLSLGGLPPLTGFFPKWLIL-------QELSKQGLFIYATILLLGSL 287
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 288900672 391 FRLFYY-------SMSGDNNYYSSFSFYDKGYYISFSMLSLLFIAVFGGSLLSWLIF 440
Cdd:MTH00200 288 LSLFFYlrlsyltLLTLSPNQINMMSSWRTKSNSNLLVGLLLLLSILGLPLTPQLLF 344
|
|
| PRK12664 |
PRK12664 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
183-440 |
1.54e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237164 [Multi-domain] Cd Length: 527 Bit Score: 41.25 E-value: 1.54e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 183 LIVLASMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFspmldnYNFGWFLLLIGCMTMFMAGLGANFE 262
Cdd:PRK12664 149 LFMLGLLINCACFPASSWVVDAYPAASNFGIIVLSLFTTKVAALVLLLF------FSGEEILLFLGIITAIYGIIFASLE 222
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 263 FDLKKIIALSTLSQLGLMMWILAMGYPK-----LAFFHLLAHALFKALLFMCAGSMIHNLKDSQDIRFMGsiVHFMPLTS 337
Cdd:PRK12664 223 QNIRRLLCYNVVGQMGLLIIAIGFSGSSgvaigILILQIVLSVVYQTLLFMVADSVINRTRKFNLNRVGG--LFKMSLEA 300
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 338 ICFNVSSLSLCGMPFLAGFYSKDLILEMVCLSWTNCFIFFLYF--FSTGSTASYSFRLFYY---SMSGDNNYYSSFSFYD 412
Cdd:PRK12664 301 MCCIIAILNMGAFPGTAGFVSKSLITHSIDTAGLTLVLYKKLFliCSLLLFASVGLKFFWYafiSKSKSKPEAEKVYIGS 380
|
250 260
....*....|....*....|....*...
gi 288900672 413 KgyyisFSMLSLLFIAVFGGSLLSWLIF 440
Cdd:PRK12664 381 K-----LSMIILVLICVVLGMFNSYLLF 403
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
11-364 |
1.68e-03 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 41.24 E-value: 1.68e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 11 FMSTFVFILSIYYLL--------FDYSVFIEW-ELFSLNSSMVVmtfifDWMSLIFMSFVMYISSLVIYYSEEymfgesN 81
Cdd:PRK07363 34 VFAVLVLAWSLFLLTqfdlsdpgMQFQEYLPWnEPLGLSYSLGV-----DGLSLPLLVLNSLLTWIAIYSIGE------N 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 82 MNR---FIFIVLMIILSMALLIISPNLISILLGWDGLGLVFYCLVIYYQNVKSYSAGMLTALSNRIGDVSILISIAWMLN 158
Cdd:PRK07363 103 TERprlYYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLIAIWGGEKRGYASIKFLIYTAVSGLLVLAAFLGIVW 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 159 FGGWNYIYYYDFISESFEMK---IITMLIVLASMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPML 235
Cdd:PRK07363 183 LSGSTSFDYDAISTQNLSLNtqlILLTGLLLGFGIKIPLVPLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFGLQL 262
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 236 DNYNFGWF---LLLIGCMTMFMAGLGANFEFDLKKIIALSTLSQLGLMMWILAMGYPKL---AFFHLLAHALFKALLFMC 309
Cdd:PRK07363 263 FPQTWSLVapgLAIIGTISVIYGALSAIAQKDIKRMVAYSSIGHMGYILVAAAAGTQLSllgAVAQMISHGLILALLFHL 342
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 288900672 310 AGSMIHNL--KDSQDIRFMGSIVHFMPLTSICFNVSSLSLCGMPFLAGFYSKDLILE 364
Cdd:PRK07363 343 VGIVERKVgtRDLDVLNGLMNPIRGLPLTSALLVLAGMASAGIPGLVGFVAEFIVFQ 399
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
181-364 |
2.09e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 40.67 E-value: 2.09e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 181 TMLIVLASMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLDNYnfgwFLLLIGCMTMFMAGLGAN 260
Cdd:MTH00070 95 TIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSN----LLIIMGLLSTLIGGWGGL 170
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 261 FEFDLKKIIALSTLSQLGLMMWILAMGyPKLAFFHLLAHALFKALLFMcagsMIHNLKDSQDIRFMGSIVHFMPLTSICF 340
Cdd:MTH00070 171 NQTQLRKIMAYSSIAHLGWMIIILTFS-PHLTLLNLLIYLIMTSSMFL----MLMNLNSTNINKLSSSWSKNPTLTSMMM 245
|
170 180
....*....|....*....|....
gi 288900672 341 nVSSLSLCGMPFLAGFYSKDLILE 364
Cdd:MTH00070 246 -LTLLSLGGLPPTTGFIPKWLILQ 268
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
179-359 |
2.52e-03 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 40.42 E-value: 2.52e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 179 IITMLIVLASMT-KSAQIPFSSWLPAAM-AAPTPVSALVhSSTLVTAGVYLLIR-----FSPMLDNYNFGWFLLLIgcMT 251
Cdd:PRK02504 210 ALALVFVIAGIAfKISAVPFHQWTPDVYeGSPTPVVAFL-SVGSKAAGFALAIRllvtaFPSFDEQWKLLFTALAI--LS 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 252 MFMAGLGANFEFDLKKIIALSTLSQLGLMMWILAM----GYPKLAFFhlLAHALFKAL-LFMCAgsMIHNLKDSQD-IRF 325
Cdd:PRK02504 287 MVLGNVVALAQTSMKRMLAYSSIGQAGFVMIGLVAgteaGYASMVFY--LLAYLFMNLgAFACV--ILFSLRTGTDqISD 362
|
170 180 190
....*....|....*....|....*....|....
gi 288900672 326 MGSIVHFMPLTSICFNVSSLSLCGMPFLAGFYSK 359
Cdd:PRK02504 363 YAGLYQKDPLLTLGLSLCLLSLGGIPPLAGFFGK 396
|
|
| Proton_antipo_N |
pfam00662 |
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an ... |
46-85 |
3.84e-03 |
|
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an amino terminal extension of pfam00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane.
Pssm-ID: 459895 [Multi-domain] Cd Length: 51 Bit Score: 35.48 E-value: 3.84e-03
10 20 30 40
....*....|....*....|....*....|....*....|
gi 288900672 46 MTFIFDWMSLIFMSFVMYISSLVIYYSEEYMFGESNMNRF 85
Cdd:pfam00662 11 FGFLIDPLSALMLLVVTGVSLLVHIYSIGYMHHDPGYARF 50
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
191-447 |
6.48e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 39.28 E-value: 6.48e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 191 KSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFS-PMLDNYNFGW--FLLLIGCMTMFMAGLGANFEFDLKK 267
Cdd:MTH00204 222 KIPQIPFHIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFSwPLFPAASEYFapLIVMLSVIAVIYGSLTTCRQVDFKR 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 268 IIALSTLSQLGLM---MWILAMGYPKLAFFHLLAHALFKALLFMcAGSMIHNLKDSQDIRFMGSIVHFMPLTSICFNVSS 344
Cdd:MTH00204 302 LIAYSSVAHMGLVplgLFTHTIEGLVAAVFLMLAHGFVSSALFI-AVTFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLS 380
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 345 LSLCGMPFLAGFYSKdlILEMVCLSWTNCFIFFLYFFSTGSTASYSFRLFYYSMSGDNNYYSSFSfYDKGYYISFSMLSL 424
Cdd:MTH00204 381 LANMGFPLSCNFVGE--FFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYLYNRISFGGGSNYLLFS-RDLNRRELLAILPL 457
|
250 260
....*....|....*....|...
gi 288900672 425 LFIAVFGGSLLSWLIFPIPNMIV 447
Cdd:MTH00204 458 IIAIFLLGIVPFIIIDLVKNSLV 480
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
195-362 |
6.80e-03 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 39.30 E-value: 6.80e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 195 IPFSSWLP-AAMAAPTPVSALVhSSTLVTAGVYLLIRFSPMLdnYNFGW-----FLLLIGCMTMFMAGLGANFEFDLKKI 268
Cdd:PRK06473 222 VPFHTWLPdAHVEASTPVSVLL-AGVLLKLGTYGLLRFGVGL--FPEAWvylapWLATWAVVSVLYGASCAIAQKDMKKM 298
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288900672 269 IALSTLSQLGLMMWILAMGYP---KLAFFHLLAHALFKALLFMCAGsMIHNLKDSQDIRFMGSIVH---FMPLTSICFNV 342
Cdd:PRK06473 299 VAYSSIGHMGYILLAAAAATPlsiLAAVFQMISHGLISALLFLLVG-VVYKKTGSRDVDVLRGLLNperGLPITGSLMIL 377
|
170 180
....*....|....*....|
gi 288900672 343 SSLSLCGMPFLAGFYSKDLI 362
Cdd:PRK06473 378 GVMASAGIPGMVGFIAEFLV 397
|
|
| |
