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Conserved domains on  [gi|1199893926|ref|YP_009378346|]
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ATP synthase F0 subunit 8 (mitochondrion) [Solemya velesiana]

Protein Classification

ATP synthase F0 subunit 8; ATP synthase Fo subunit 8( domain architecture ID 10009584)

ATP synthase F0 subunit 8 is a component of the mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) that produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain| mitochondrial ATP synthase Fo subunit 8 is part of the Fo complex of the large, transmembrane F-type ATP synthase (F1Fo ATPase), which is responsible for the final step of oxidative phosphorylation in the electron transport chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ATP8 MTH00147
ATP synthase F0 subunit 8; Provisional
 1-45 2.64e-07

ATP synthase F0 subunit 8; Provisional


:

Pssm-ID: 177204  Cd Length: 51  Bit Score: 41.63  E-value: 2.64e-07
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*
gi 1199893926  1 MPQLSPLNWLFLFFVFWCVIFLMMCVVWWSTGQHYDMKSEFKSEK 45
Cdd:MTH00147   1 MPQLSPLNWIFLFILFWSAVIIVSVIIWWSTKNLYTINKSPKTNK 45
 
Name Accession Description Interval E-value
ATP8 MTH00147
ATP synthase F0 subunit 8; Provisional
 1-45 2.64e-07

ATP synthase F0 subunit 8; Provisional


Pssm-ID: 177204  Cd Length: 51  Bit Score: 41.63  E-value: 2.64e-07
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*
gi 1199893926  1 MPQLSPLNWLFLFFVFWCVIFLMMCVVWWSTGQHYDMKSEFKSEK 45
Cdd:MTH00147   1 MPQLSPLNWIFLFILFWSAVIIVSVIIWWSTKNLYTINKSPKTNK 45
 
Name Accession Description Interval E-value
ATP8 MTH00147
ATP synthase F0 subunit 8; Provisional
 1-45 2.64e-07

ATP synthase F0 subunit 8; Provisional


Pssm-ID: 177204  Cd Length: 51  Bit Score: 41.63  E-value: 2.64e-07
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*
gi 1199893926  1 MPQLSPLNWLFLFFVFWCVIFLMMCVVWWSTGQHYDMKSEFKSEK 45
Cdd:MTH00147   1 MPQLSPLNWIFLFILFWSAVIIVSVIIWWSTKNLYTINKSPKTNK 45
ATP8 MTH00186
ATP synthase F0 subunit 8; Provisional
 1-29 4.88e-03

ATP synthase F0 subunit 8; Provisional


Pssm-ID: 177236  Cd Length: 52  Bit Score: 30.86  E-value: 4.88e-03
                         10        20
                 ....*....|....*....|....*....
gi 1199893926  1 MPQLSPLNWLFLFFVFWCVIFLMMCVVWW 29
Cdd:MTH00186   1 MPQLSPLFWALLFIMIWLLIFLAMSMTWW 29
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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