|
Name |
Accession |
Description |
Interval |
E-value |
| mrcB |
PRK09506 |
bifunctional glycosyl transferase/transpeptidase; Reviewed |
20-798 |
0e+00 |
|
bifunctional glycosyl transferase/transpeptidase; Reviewed
Pssm-ID: 236544 [Multi-domain] Cd Length: 830 Bit Score: 1576.70 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 20 WLWLLLKLAIVFAVLIAIYGVYLDQKIRSRIDGKVWQLPAAVYGRMVNLEPDMTISKNEMVKLLEATQYRQVSKMTRPGE 99
Cdd:PRK09506 63 WLWLLLKLFIVFAVLIAIYGVYLDQKIRSRIDGKVWQLPAAVYGRMVNLEPGMSYSKNEMVKLLEATQYRQVSKMTRPGE 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 100 FTVQANSIEMIRRPFDFPDSKEGQVRARLTFDGDHLATIVNMENNRQFGFFRLDPRLITMISSPNGEQRLFVPRSGFPDL 179
Cdd:PRK09506 143 FTVQANSIEMIRRPFDFPDSKEGQVRARLTFDGDRLATIVNLDNNRQFGFFRLDPRLITMLQSPNGEQRLFVPRSGFPDL 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 180 LVDTLLATEDRHFYEHDGISLYSIGRAVLANLTAGRTVQGASTLTQQLVKNLFLSSERSYWRKANEAYMALIMDARYSKD 259
Cdd:PRK09506 223 LVDTLLATEDRHFYEHDGISLYSIGRAVLANLTAGRTVQGGSTLTQQLVKNLFLSNERSLWRKANEAYMALIMDARYSKD 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 260 RILELYMNEVYLGQSGDNEIRGFPLASLYYFGRPVEELSLDQQALLVGMVKGASIYNPWRNPKLALERRNLVLRLLQQQQ 339
Cdd:PRK09506 303 RILELYLNEVYLGQSGDDQIRGFPLASLYYFGRPVEELSLDQQALLVGMVKGASLYNPWRNPKLALERRNLVLRLLQQQQ 382
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 340 IIDQELYDMLSARPLGVQPRGGVISPQPAFMQLVRQELQAKLGDKVKDLSGVKIFTTFDSVAQDAAEKAAVEGIPALKKQ 419
Cdd:PRK09506 383 IIDQELYDMLSARPLGVQPKGGVISPQPAFMQMVRQELQAKLGDKVKDLSGVKIFTTLDPVSQDAAEKAVEEGIPALKKQ 462
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 420 RKLSDLETAIVVVDRFSGEVRAMVGGSEPQFAGYNRAMQARRSIGSLAKPATYLTALSQPKIYRLNTWIADAPIALRQPN 499
Cdd:PRK09506 463 RKLSDLETAMVVVDRFSGEVRAMVGGSEPQFAGYNRAMQARRSIGSLAKPATYLTALSQPDKYRLNTWIADAPISLRQPN 542
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 500 GQVWSPQNDDRRYseSGRVMLVDALTRSMNVPTVNLGMALGLPAVTETWIKLGVPKDQLHPVPAMLLGALNLTPIEVAQA 579
Cdd:PRK09506 543 GQVWSPQNDDRRF--SGRVMLVDALTRSMNVPTVNLGMALGLPAVTDTWIKLGVPKDQLNPVPAMLLGALNLTPIEVAQA 620
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 580 FQTIASGGNRAPLSALRSVIAEDGKVLYQSFPQAERAVPAQAAYLTLWTMQQVVQRGTGRQLGAKYPNLHLAGKTGTTNN 659
Cdd:PRK09506 621 FQTIASGGNRAPLSALRSVIAEDGKVLYQSFPQAERAVPAQAAYLTLYTMQQVVQRGTGRQLGAKYPNLHLAGKTGTTND 700
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 660 NVDTWFAGIDGSTVTITWVGRDNNQPTKLYGASGAMSIYQRYLANQTPTPLNLVPPEDIADMGVDYDGNFVCSG-GMRIL 738
Cdd:PRK09506 701 LVDSWFAGIDGKEVTITWVGRDNNQPTKLYGASGAMTIYQRYLENQTPTPLNLTPPEDIVDMGVDYDGNFVCGSgGMRVL 780
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 739 PVWTSDPQSLCQQSEMQQQPSgnpfdqssqpQQQPQQQPAQQEQKDSDGVAGWIKDMFGS 798
Cdd:PRK09506 781 PVWTDDPQSLCQQSEMQQQPS----------QPQQQPQQQPAEQKDSDGVAGWIKDMFGQ 830
|
|
| PBP_1b |
TIGR02071 |
penicillin-binding protein 1B; Bacterial that synthesize a cell wall of peptidoglycan (murein) ... |
22-750 |
0e+00 |
|
penicillin-binding protein 1B; Bacterial that synthesize a cell wall of peptidoglycan (murein) generally have several transglycosylases and transpeptidases for the task. This family consists of a particular bifunctional transglycosylase/transpeptidase in E. coli and other Proteobacteria, designated penicillin-binding protein 1B. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]
Pssm-ID: 273952 [Multi-domain] Cd Length: 730 Bit Score: 1322.03 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 22 WLLLKLAIVFAVLIAIYGVYLDQKIRSRIDGKVWQLPAAVYGRMVNLEPDMTISKNEMVKLLEATQYRQVSKMTRPGEFT 101
Cdd:TIGR02071 1 GFLLKLAFTAAVLLAFYGLYLDQQIRSRFDGKVWQLPAAVYARPLNLEPGMSLSKKELLIELDATQYRQVSHVTLPGEYS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 102 VQANSIEMIRRPFDFPDSKEGQVRARLTFDGDHLATIVNMENNRQFGFFRLDPRLITMISSPNGEQRLFVPRSGFPDLLV 181
Cdd:TIGR02071 81 VQNNSIEVIRRPFDFPDGAEPQRRARLTFNGNQLSKIENLDNNKEFGFFRLDPKLIAMLYSPNGEQRLFVPRDQFPELLV 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 182 DTLLATEDRHFYEHDGISLYSIGRAVLANLTAGRTVQGASTLTQQLVKNLFLSSERSYWRKANEAYMALIMDARYSKDRI 261
Cdd:TIGR02071 161 DTLLATEDRDFYEHDGISLYSIGRAVWVNLTAGRTVQGGSTLTQQLVKNLFLSNERSLWRKANEAYMALILDARYSKDRI 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 262 LELYMNEVYLGQSGDNEIRGFPLASLYYFGRPVEELSLDQQALLVGMVKGASIYNPWRNPKLALERRNLVLRLLQQQQII 341
Cdd:TIGR02071 241 LELYLNEVYLGQSGDDAIHGFPLASQYYFGRPLGELSLDQVALLVGMVKGPSYYNPWRNPDRALERRNLVLRLLQEQKII 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 342 DQELYDMLSARPLGVQPRGGVISPQPAFMQLVRQELQAKLGDKVKDLSGVKIFTTFDSVAQDAAEKAAVEGIPALKKQRK 421
Cdd:TIGR02071 321 DDEEYDMLSARPLGVQKKGGIISRQPAFLQLVRRELRQKLGDKVKDLSGLRIFTTLDPVSQSAAEQAVQETIPALKKKKK 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 422 LSDLETAIVVVDRFSGEVRAMVGGSEPQFAGYNRAMQARRSIGSLAKPATYLTALSQPKIYRLNTWIADAPIALRQPNGQ 501
Cdd:TIGR02071 401 LPDLEAAMVVTDRFTGEVRAMVGGSDPQFAGFNRALQARRQIGSLVKPAVYLTALSQPDKYRLNTWIEDQPLSIKLSNGQ 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 502 VWSPQNDDRRYseSGRVMLVDALTRSMNVPTVNLGMALGLPAVTETWIKLGVPKDQLHPVPAMLLGALNLTPIEVAQAFQ 581
Cdd:TIGR02071 481 VWSPQNYDRRY--SGTVMLYDALAHSLNIPTVNLGMKVGLPKVSQTWNKLGINKDEIPPVPSMLLGAINLTPYEVAQLYQ 558
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 582 TIASGGNRAPLSALRSVIAEDGKVLYQSFPQAERAVPAQAAYLTLWTMQQVVQRGTGRQLGAKYPNLHLAGKTGTTNNNV 661
Cdd:TIGR02071 559 TIASGGNRAPLSAVRSVLDEDGKVLYQSDPQAEQAVPSQAAYLTLYAMQQVVQRGTARSLGADFPSLSLAGKTGTTNDNR 638
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 662 DTWFAGIDGSTVTITWVGRDNNQPTKLYGASGAMSIYQRYLANQTPTPLNLVPPEDIADMGVDYDGNFVCS---GGMRIL 738
Cdd:TIGR02071 639 DSWFAGIDGKEVTIIWLGRDDNGPTKLTGASGALQVYARYLSYQTPEPLLLVPPEGIDWFGVDPQGNGGCKancPGARRL 718
|
730
....*....|..
gi 2030744284 739 PVWTSDPQSLCQ 750
Cdd:TIGR02071 719 PIWTGNPQALCQ 730
|
|
| MrcB |
COG0744 |
Penicillin-binding protein 1B/1F, peptidoglycan transglycosylase/transpeptidase [Cell wall ... |
149-720 |
0e+00 |
|
Penicillin-binding protein 1B/1F, peptidoglycan transglycosylase/transpeptidase [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 440507 [Multi-domain] Cd Length: 630 Bit Score: 661.23 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 149 FFRLDPRLITMISspnGEQRLFVPRSGFPDLLVDTLLATEDRHFYEHDGISLYSIGRAVLANLTAGRTVQGASTLTQQLV 228
Cdd:COG0744 58 IYDRDGTLIATLG---DENREWVPLDQIPPHLKDAVVAIEDRRFYEHGGVDPKGIARALVANLTAGGVVQGGSTITQQLV 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 229 KNLFLSSERSYWRKANEAYMALIMDARYSKDRILELYMNEVYLGQSgdneIRGFPLASLYYFGRPVEELSLDQQALLVGM 308
Cdd:COG0744 135 KNLFLSNERTLSRKLKEALLALKLERKYSKDEILELYLNTVYFGRG----AYGIEAAAQYYFGKSASDLTLAEAALLAGL 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 309 VKGASIYNPWRNPKLALERRNLVLRLLQQQQIIDQELYDMLSARPLGVQP--RGGVISPQPAFMQLVRQELQAKLGDKVK 386
Cdd:COG0744 211 VKAPSYYDPYRNPEAAKERRNLVLDRMVEQGYITQAEADAAKAEPLTLVPppNGAAAGKYPYFVDYVRRELEELLGEDDL 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 387 DLSGVKIFTTFDSVAQDAAEKAAVEGIPalkkQRKLSDLETAIVVVDRFSGEVRAMVGGSEPQFAGYNRAMQARRSIGSL 466
Cdd:COG0744 291 YRGGLKIYTTLDPKLQKAAEKAVKNVLP----EGKPGGLQAALVVVDPKTGEVLAMVGGRDYGKSQFNRATQAKRQPGST 366
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 467 AKPATYLTALSQPkiYRLNTWIADAPIALrqpNGQVWSPQNDDRRYseSGRVMLVDALTRSMNVPTVNLGMALGLPAVTE 546
Cdd:COG0744 367 FKPFVYAAALEQG--YTPATTVDDEPVTF---PGGGWSPKNYDGRY--RGPVTLREALANSLNTPAVRLAQEVGLDKVVD 439
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 547 TWIKLGVPKDqLHPVPAMLLGALNLTPIEVAQAFQTIASGGNRAPLSALRSVIAEDGKVLYQSFPQAERAVPAQAAYLTL 626
Cdd:COG0744 440 TARRLGITSP-LDPNPSLALGTSEVSPLEMASAYATFANGGVYVEPHAITKVTDADGKVLYEAKPKCEQVISPEVAYLMT 518
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 627 WTMQQVVQRGTGRqlGAKYPNLHLAGKTGTTNNNVDTWFAGIDGSTVTITWVGRDNNQPTK-LYGASGAMSIYQRYL--A 703
Cdd:COG0744 519 DMLQDVVTSGTGR--AARLPGRPVAGKTGTTNDNRDAWFVGYTPQLVTAVWVGNDDNSPMGyVTGGSLPAPIWRDFMeaA 596
|
570
....*....|....*..
gi 2030744284 704 NQTPTPLNLVPPEDIAD 720
Cdd:COG0744 597 LEGLPVEDFPKPSGVVR 613
|
|
| Transgly |
pfam00912 |
Transglycosylase; The penicillin-binding proteins are bifunctional proteins consisting of ... |
158-329 |
1.27e-73 |
|
Transglycosylase; The penicillin-binding proteins are bifunctional proteins consisting of transglycosylase and transpeptidase in the N- and C-terminus respectively. The transglycosylase domain catalyzes the polymerization of murein glycan chains.
Pssm-ID: 459993 [Multi-domain] Cd Length: 177 Bit Score: 237.42 E-value: 1.27e-73
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 158 TMISSPNGEQRLFVPRSGFPDLLVDTLLATEDRHFYEHDGISLYSIGRAVLANLTAGRTVQGASTLTQQLVKNLFLSSER 237
Cdd:pfam00912 3 TLLAELGEENREYVPLDDIPPALKNAVLAIEDRRFYEHGGVDPKGIARALLSNLRSGRIVQGGSTITQQLAKNLFLTPER 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 238 SYWRKANEAYMALIMDARYSKDRILELYMNEVYLGqsgdNEIRGFPLASLYYFGRPVEELSLDQQALLVGMVKGASIYNP 317
Cdd:pfam00912 83 TLTRKLKEAVLALKLERRYSKDEILEAYLNTVYFG----RGAYGIEAAARAYFGKDASDLTLAEAALLAGLPQAPSRYNP 158
|
170
....*....|..
gi 2030744284 318 WRNPKLALERRN 329
Cdd:pfam00912 159 LRNPERAKRRRN 170
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| mrcB |
PRK09506 |
bifunctional glycosyl transferase/transpeptidase; Reviewed |
20-798 |
0e+00 |
|
bifunctional glycosyl transferase/transpeptidase; Reviewed
Pssm-ID: 236544 [Multi-domain] Cd Length: 830 Bit Score: 1576.70 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 20 WLWLLLKLAIVFAVLIAIYGVYLDQKIRSRIDGKVWQLPAAVYGRMVNLEPDMTISKNEMVKLLEATQYRQVSKMTRPGE 99
Cdd:PRK09506 63 WLWLLLKLFIVFAVLIAIYGVYLDQKIRSRIDGKVWQLPAAVYGRMVNLEPGMSYSKNEMVKLLEATQYRQVSKMTRPGE 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 100 FTVQANSIEMIRRPFDFPDSKEGQVRARLTFDGDHLATIVNMENNRQFGFFRLDPRLITMISSPNGEQRLFVPRSGFPDL 179
Cdd:PRK09506 143 FTVQANSIEMIRRPFDFPDSKEGQVRARLTFDGDRLATIVNLDNNRQFGFFRLDPRLITMLQSPNGEQRLFVPRSGFPDL 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 180 LVDTLLATEDRHFYEHDGISLYSIGRAVLANLTAGRTVQGASTLTQQLVKNLFLSSERSYWRKANEAYMALIMDARYSKD 259
Cdd:PRK09506 223 LVDTLLATEDRHFYEHDGISLYSIGRAVLANLTAGRTVQGGSTLTQQLVKNLFLSNERSLWRKANEAYMALIMDARYSKD 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 260 RILELYMNEVYLGQSGDNEIRGFPLASLYYFGRPVEELSLDQQALLVGMVKGASIYNPWRNPKLALERRNLVLRLLQQQQ 339
Cdd:PRK09506 303 RILELYLNEVYLGQSGDDQIRGFPLASLYYFGRPVEELSLDQQALLVGMVKGASLYNPWRNPKLALERRNLVLRLLQQQQ 382
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 340 IIDQELYDMLSARPLGVQPRGGVISPQPAFMQLVRQELQAKLGDKVKDLSGVKIFTTFDSVAQDAAEKAAVEGIPALKKQ 419
Cdd:PRK09506 383 IIDQELYDMLSARPLGVQPKGGVISPQPAFMQMVRQELQAKLGDKVKDLSGVKIFTTLDPVSQDAAEKAVEEGIPALKKQ 462
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 420 RKLSDLETAIVVVDRFSGEVRAMVGGSEPQFAGYNRAMQARRSIGSLAKPATYLTALSQPKIYRLNTWIADAPIALRQPN 499
Cdd:PRK09506 463 RKLSDLETAMVVVDRFSGEVRAMVGGSEPQFAGYNRAMQARRSIGSLAKPATYLTALSQPDKYRLNTWIADAPISLRQPN 542
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 500 GQVWSPQNDDRRYseSGRVMLVDALTRSMNVPTVNLGMALGLPAVTETWIKLGVPKDQLHPVPAMLLGALNLTPIEVAQA 579
Cdd:PRK09506 543 GQVWSPQNDDRRF--SGRVMLVDALTRSMNVPTVNLGMALGLPAVTDTWIKLGVPKDQLNPVPAMLLGALNLTPIEVAQA 620
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 580 FQTIASGGNRAPLSALRSVIAEDGKVLYQSFPQAERAVPAQAAYLTLWTMQQVVQRGTGRQLGAKYPNLHLAGKTGTTNN 659
Cdd:PRK09506 621 FQTIASGGNRAPLSALRSVIAEDGKVLYQSFPQAERAVPAQAAYLTLYTMQQVVQRGTGRQLGAKYPNLHLAGKTGTTND 700
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 660 NVDTWFAGIDGSTVTITWVGRDNNQPTKLYGASGAMSIYQRYLANQTPTPLNLVPPEDIADMGVDYDGNFVCSG-GMRIL 738
Cdd:PRK09506 701 LVDSWFAGIDGKEVTITWVGRDNNQPTKLYGASGAMTIYQRYLENQTPTPLNLTPPEDIVDMGVDYDGNFVCGSgGMRVL 780
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 739 PVWTSDPQSLCQQSEMQQQPSgnpfdqssqpQQQPQQQPAQQEQKDSDGVAGWIKDMFGS 798
Cdd:PRK09506 781 PVWTDDPQSLCQQSEMQQQPS----------QPQQQPQQQPAEQKDSDGVAGWIKDMFGQ 830
|
|
| PBP_1b |
TIGR02071 |
penicillin-binding protein 1B; Bacterial that synthesize a cell wall of peptidoglycan (murein) ... |
22-750 |
0e+00 |
|
penicillin-binding protein 1B; Bacterial that synthesize a cell wall of peptidoglycan (murein) generally have several transglycosylases and transpeptidases for the task. This family consists of a particular bifunctional transglycosylase/transpeptidase in E. coli and other Proteobacteria, designated penicillin-binding protein 1B. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]
Pssm-ID: 273952 [Multi-domain] Cd Length: 730 Bit Score: 1322.03 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 22 WLLLKLAIVFAVLIAIYGVYLDQKIRSRIDGKVWQLPAAVYGRMVNLEPDMTISKNEMVKLLEATQYRQVSKMTRPGEFT 101
Cdd:TIGR02071 1 GFLLKLAFTAAVLLAFYGLYLDQQIRSRFDGKVWQLPAAVYARPLNLEPGMSLSKKELLIELDATQYRQVSHVTLPGEYS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 102 VQANSIEMIRRPFDFPDSKEGQVRARLTFDGDHLATIVNMENNRQFGFFRLDPRLITMISSPNGEQRLFVPRSGFPDLLV 181
Cdd:TIGR02071 81 VQNNSIEVIRRPFDFPDGAEPQRRARLTFNGNQLSKIENLDNNKEFGFFRLDPKLIAMLYSPNGEQRLFVPRDQFPELLV 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 182 DTLLATEDRHFYEHDGISLYSIGRAVLANLTAGRTVQGASTLTQQLVKNLFLSSERSYWRKANEAYMALIMDARYSKDRI 261
Cdd:TIGR02071 161 DTLLATEDRDFYEHDGISLYSIGRAVWVNLTAGRTVQGGSTLTQQLVKNLFLSNERSLWRKANEAYMALILDARYSKDRI 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 262 LELYMNEVYLGQSGDNEIRGFPLASLYYFGRPVEELSLDQQALLVGMVKGASIYNPWRNPKLALERRNLVLRLLQQQQII 341
Cdd:TIGR02071 241 LELYLNEVYLGQSGDDAIHGFPLASQYYFGRPLGELSLDQVALLVGMVKGPSYYNPWRNPDRALERRNLVLRLLQEQKII 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 342 DQELYDMLSARPLGVQPRGGVISPQPAFMQLVRQELQAKLGDKVKDLSGVKIFTTFDSVAQDAAEKAAVEGIPALKKQRK 421
Cdd:TIGR02071 321 DDEEYDMLSARPLGVQKKGGIISRQPAFLQLVRRELRQKLGDKVKDLSGLRIFTTLDPVSQSAAEQAVQETIPALKKKKK 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 422 LSDLETAIVVVDRFSGEVRAMVGGSEPQFAGYNRAMQARRSIGSLAKPATYLTALSQPKIYRLNTWIADAPIALRQPNGQ 501
Cdd:TIGR02071 401 LPDLEAAMVVTDRFTGEVRAMVGGSDPQFAGFNRALQARRQIGSLVKPAVYLTALSQPDKYRLNTWIEDQPLSIKLSNGQ 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 502 VWSPQNDDRRYseSGRVMLVDALTRSMNVPTVNLGMALGLPAVTETWIKLGVPKDQLHPVPAMLLGALNLTPIEVAQAFQ 581
Cdd:TIGR02071 481 VWSPQNYDRRY--SGTVMLYDALAHSLNIPTVNLGMKVGLPKVSQTWNKLGINKDEIPPVPSMLLGAINLTPYEVAQLYQ 558
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 582 TIASGGNRAPLSALRSVIAEDGKVLYQSFPQAERAVPAQAAYLTLWTMQQVVQRGTGRQLGAKYPNLHLAGKTGTTNNNV 661
Cdd:TIGR02071 559 TIASGGNRAPLSAVRSVLDEDGKVLYQSDPQAEQAVPSQAAYLTLYAMQQVVQRGTARSLGADFPSLSLAGKTGTTNDNR 638
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 662 DTWFAGIDGSTVTITWVGRDNNQPTKLYGASGAMSIYQRYLANQTPTPLNLVPPEDIADMGVDYDGNFVCS---GGMRIL 738
Cdd:TIGR02071 639 DSWFAGIDGKEVTIIWLGRDDNGPTKLTGASGALQVYARYLSYQTPEPLLLVPPEGIDWFGVDPQGNGGCKancPGARRL 718
|
730
....*....|..
gi 2030744284 739 PVWTSDPQSLCQ 750
Cdd:TIGR02071 719 PIWTGNPQALCQ 730
|
|
| PRK14850 |
PRK14850 |
penicillin-binding protein 1b; Provisional |
24-751 |
0e+00 |
|
penicillin-binding protein 1b; Provisional
Pssm-ID: 237835 [Multi-domain] Cd Length: 764 Bit Score: 1025.94 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 24 LLKLAIVFAVLIAIYGVYLDQKIRSRIDGKVWQLPAAVYGRMVNLEPDMTISKNEMVKLLEATQYRQVSKMTRPGEFTVQ 103
Cdd:PRK14850 13 LIYVFFFVLLLILCYGVYLYVKINRFINGKVWNFPTSIYSRIVNLEPGNSYSQKDVIHLLKSTMYRKVDLVTLPGEFSVK 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 104 ANSIEMIRRPFDFPDSKEGQVRARLTFDGDHLATIVNMENNRQFGFFRLDPRLITMISSPNGEQRLFVPRSGFPDLLVDT 183
Cdd:PRK14850 93 NNTIELIRRSFDFPDIREDEIHARLYFNKDKLVRIKNIDNNHDFSFLRLDPKLIAMLYSPEGKKRLFIPRNQYPEMLIKT 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 184 LLATEDRHFYEHDGISLYSIGRAVLANLTAGRTVQGASTLTQQLVKNLFLSSERSYWRKANEAYMALIMDARYSKDRILE 263
Cdd:PRK14850 173 LLAIEDKYFYEHDGIHLSSIGRAFLVNLMSGHTIQGGSTLTQQLVKNLFLTNTRSLWRKINEIYMALILDRFYSKDRILE 252
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 264 LYMNEVYLGQSGDNEIRGFPLASLYYFGRPVEELSLDQQALLVGMVKGASIYNPWRNPKLALERRNLVLRLLQQQQIIDQ 343
Cdd:PRK14850 253 LYLNEVYLGQDGNEQIRGFPLASIYYFGRPINELNLDQYALLVGMVKGASLYNPWTNPNLTLKRRNLVLFLLYKQKVITR 332
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 344 ELYDMLSARPLGVQPRGGVISPQPAFMQLVRQELQAKLGDKVKDLSGVKIFTTFDSVAQDAAEKAAVEGIPALKKQRKLS 423
Cdd:PRK14850 333 KLYKDLCSRPLNVQSKGNIISSHPAFIQLVCEEFHKKIHYPFKNFSGTKIFTTLDYISQNAAEQAVKIGIPILKRKKRLK 412
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 424 DLETAIVVVDRFSGEVRAMVGGSEPQFAGYNRAMQARRSIGSLAKPATYLTALSQPKIYRLNTWIADAPIALRQPNGQVW 503
Cdd:PRK14850 413 DLEVAMVIIDRFSGEVRALIGSSKPEFNGYNRALKARRSIGSLSKPITYLTALSQPEKYHLNTWISDTPISIKLDNGQYW 492
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 504 SPQNDDRRYseSGRVMLVDALTRSMNVPTVNLGMALGLPAVTETWIKLGVPKDQLHPVPAMLLGALNLTPIEVAQAFQTI 583
Cdd:PRK14850 493 TPKNNNFSF--SGKVMLIDALIHSINIPTVHLSINLGLKKLVDSWILLGISSNYITPLPSISLGAINLTPMEVAQVFQII 570
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 584 ASGGNRAPLSALRSVIAEDGKVLYQSFPQAERAVPAQAAYLTLWTMQQVVQRGTGRQLGAKYPNLHLAGKTGTTNNNVDT 663
Cdd:PRK14850 571 GSGGYKSSLSSIRSIISDDNKVLYQNFPQSKHVESSQASYLTLYAMQQVVKSGTAKSLGTIFKEFSLAGKTGTTNNLVDS 650
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 664 WFAGIDGSTVTITWVGRDNNQPTKLYGASGAMSIYQRYLANQTPTPLNLVPPEDIADMGVDYDGNFVC----SGGMRILP 739
Cdd:PRK14850 651 WFVGIDGKQVVITWIGRDNNHTTKLYGSSGAMKIYKRYLQYQNPVPLVLKAPNNINMFYINNLGELFCkkgnNQYNRMLP 730
|
730
....*....|..
gi 2030744284 740 VWTSDPQSLCQQ 751
Cdd:PRK14850 731 IWSINNKKICND 742
|
|
| MrcB |
COG0744 |
Penicillin-binding protein 1B/1F, peptidoglycan transglycosylase/transpeptidase [Cell wall ... |
149-720 |
0e+00 |
|
Penicillin-binding protein 1B/1F, peptidoglycan transglycosylase/transpeptidase [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 440507 [Multi-domain] Cd Length: 630 Bit Score: 661.23 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 149 FFRLDPRLITMISspnGEQRLFVPRSGFPDLLVDTLLATEDRHFYEHDGISLYSIGRAVLANLTAGRTVQGASTLTQQLV 228
Cdd:COG0744 58 IYDRDGTLIATLG---DENREWVPLDQIPPHLKDAVVAIEDRRFYEHGGVDPKGIARALVANLTAGGVVQGGSTITQQLV 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 229 KNLFLSSERSYWRKANEAYMALIMDARYSKDRILELYMNEVYLGQSgdneIRGFPLASLYYFGRPVEELSLDQQALLVGM 308
Cdd:COG0744 135 KNLFLSNERTLSRKLKEALLALKLERKYSKDEILELYLNTVYFGRG----AYGIEAAAQYYFGKSASDLTLAEAALLAGL 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 309 VKGASIYNPWRNPKLALERRNLVLRLLQQQQIIDQELYDMLSARPLGVQP--RGGVISPQPAFMQLVRQELQAKLGDKVK 386
Cdd:COG0744 211 VKAPSYYDPYRNPEAAKERRNLVLDRMVEQGYITQAEADAAKAEPLTLVPppNGAAAGKYPYFVDYVRRELEELLGEDDL 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 387 DLSGVKIFTTFDSVAQDAAEKAAVEGIPalkkQRKLSDLETAIVVVDRFSGEVRAMVGGSEPQFAGYNRAMQARRSIGSL 466
Cdd:COG0744 291 YRGGLKIYTTLDPKLQKAAEKAVKNVLP----EGKPGGLQAALVVVDPKTGEVLAMVGGRDYGKSQFNRATQAKRQPGST 366
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 467 AKPATYLTALSQPkiYRLNTWIADAPIALrqpNGQVWSPQNDDRRYseSGRVMLVDALTRSMNVPTVNLGMALGLPAVTE 546
Cdd:COG0744 367 FKPFVYAAALEQG--YTPATTVDDEPVTF---PGGGWSPKNYDGRY--RGPVTLREALANSLNTPAVRLAQEVGLDKVVD 439
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 547 TWIKLGVPKDqLHPVPAMLLGALNLTPIEVAQAFQTIASGGNRAPLSALRSVIAEDGKVLYQSFPQAERAVPAQAAYLTL 626
Cdd:COG0744 440 TARRLGITSP-LDPNPSLALGTSEVSPLEMASAYATFANGGVYVEPHAITKVTDADGKVLYEAKPKCEQVISPEVAYLMT 518
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 627 WTMQQVVQRGTGRqlGAKYPNLHLAGKTGTTNNNVDTWFAGIDGSTVTITWVGRDNNQPTK-LYGASGAMSIYQRYL--A 703
Cdd:COG0744 519 DMLQDVVTSGTGR--AARLPGRPVAGKTGTTNDNRDAWFVGYTPQLVTAVWVGNDDNSPMGyVTGGSLPAPIWRDFMeaA 596
|
570
....*....|....*..
gi 2030744284 704 NQTPTPLNLVPPEDIAD 720
Cdd:COG0744 597 LEGLPVEDFPKPSGVVR 613
|
|
| PBP_1a_fam |
TIGR02074 |
penicillin-binding protein, 1A family; Bacterial that synthesize a cell wall of peptidoglycan ... |
167-703 |
9.48e-152 |
|
penicillin-binding protein, 1A family; Bacterial that synthesize a cell wall of peptidoglycan (murein) generally have several transglycosylases and transpeptidases for the task. This family consists of bifunctional transglycosylase/transpeptidase penicillin-binding proteins (PBP). In the Proteobacteria, this family includes PBP 1A but not the paralogous PBP 1B (TIGR02071). This family also includes related proteins, often designated PBP 1A, from other bacterial lineages. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]
Pssm-ID: 273955 [Multi-domain] Cd Length: 531 Bit Score: 454.02 E-value: 9.48e-152
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 167 QRLFVPRSGFPDLLVDTLLATEDRHFYEHDGISLYSIGRAVLANLTAGRTVQGASTLTQQLVKNLFLSSERSYWRKANEA 246
Cdd:TIGR02074 1 RREYVPIDDIPENLINAFLAIEDRRFYDHFGIDLKGIGRAAVANITSGRVLEGGSTITQQLAKNLYLTNERTITRKIQEA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 247 YMALIMDARYSKDRILELYMNEVYLGQsGDNeirGFPLASLYYFGRPVEELSLDQQALLVGMVKGASIYNPWRNPKLALE 326
Cdd:TIGR02074 81 LLALKLEQKLSKDEILELYLNRIYFGN-GAY---GIEAAAQFYFGKSVNDLTLAEAAMLAGLPKAPSAYNPFKNPERAKD 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 327 RRNLVLRLLQQQQIIDQELYDMLSARPLGVQPRGGvISPQ---PAFMQLVRQELQAKLGDKVKDlSGVKIFTTFDSVAQD 403
Cdd:TIGR02074 157 RRNLVLSNMVENGYITAEEAEEAINEPIQLYLQTK-KSEQykaPYFVDYVIQELEEEYGEELYT-GGLKIYTTLDLDAQK 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 404 AAEKAAVEGIPALKKQRKLsDLETAIVVVDRFSGEVRAMVGGSEPQFAGYNRAMQARRSIGSLAKPATYLTALSqpKIYR 483
Cdd:TIGR02074 235 AAEKVLNTGLRVAGRRDGD-DLQAALVAIDPDTGAVRALVGGRDYGKSQFNRATQAKRQPGSTFKPFVYAAALE--KGLT 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 484 LNTWIADAPIALrQPNGqVWSPQNDDRRYseSGRVMLVDALTRSMNVPTVNLGMALGLPAVTETWIKLGVpKDQLHPVPA 563
Cdd:TIGR02074 312 PATIVNDEPITY-NGNG-PWSPKNYGGGY--RGNVTLRQALAQSRNIPAVRLLQEVGLDKVVALAKRFGI-TSPLDPVLS 386
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 564 MLLGALNLTPIEVAQAFQTIASGGNRAPLSALRSVIAEDGKVLYQSFPQAERAVPAQAAYLTLWTMQQVVQRGTGRqlGA 643
Cdd:TIGR02074 387 LALGTVEVSPLEMASAYAVFANGGKYVEPHGIRKIVDRDGKVIYENKPKTTQVISPATAYIMTDMLKGVVESGTGR--SA 464
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2030744284 644 KYPNLHLAGKTGTTNNNVDTWFAGIDGSTVTITWVGRDNNQPTKL--YGASGAMSIYQRYLA 703
Cdd:TIGR02074 465 RLPGRPVAGKTGTTQNWRDAWFVGYTPYYVTAVWVGYDDKKTLGKsgTGGGLAAPIWRDFMA 526
|
|
| MrcA |
COG5009 |
Membrane carboxypeptidase/penicillin-binding protein [Cell wall/membrane/envelope biogenesis]; |
154-724 |
1.19e-149 |
|
Membrane carboxypeptidase/penicillin-binding protein [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 444033 [Multi-domain] Cd Length: 785 Bit Score: 457.31 E-value: 1.19e-149
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 154 PRLITMISSPNG--------EQRLFVPRSGFPDLLVDTLLATEDRHFYEHDGISLYSIGRAVLANLTAGRTVQGASTLTQ 225
Cdd:COG5009 44 PPTPSRVYSADGkliaefgeERRIPVPIEEIPPLLINAFLAAEDKRFYEHPGVDPIGIARAAVVNLRTGRRVQGGSTITQ 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 226 QLVKNLFLSSERSYWRKANEAYMALIMDARYSKDRILELYMNEVYLGQsgdneiR--GFPLASLYYFGRPVEELSLDQQA 303
Cdd:COG5009 124 QVAKNFLLSPERTLTRKIKEAILALRIEQELSKDEILELYLNKIYLGH------RayGVAAAAQTYFGKSLDELTLAEAA 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 304 LLVGMVKGASIYNPWRNPKLALERRNLVlrllqqqqiidqeLYDMLS-------------ARPLGVQPRGGVISPQ-PAF 369
Cdd:COG5009 198 MLAGLPKAPSRYNPIRNPERALERRNYV-------------LGRMLElgyitqaeyeaakAEPLTARYHGASAEVDaPYF 264
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 370 MQLVRQELQAKLGDKVKDLSGVKIFTTFDSVAQDAAEKAAVEGI------------------------PALKKQRKLSDL 425
Cdd:COG5009 265 AEMVRRELVERYGEDALYTGGLKVYTTLDPRLQEAAEKALRDGLlaydrrhgyrgpeahldlaeedwdEALAEVPDVGDL 344
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 426 -----------------------------------------------------------------------------ETA 428
Cdd:COG5009 345 rpavvlevddksarvglrdgetgtlpleglkwarpyindnrrgpapksasdvlkpgdvirvrpvadggwrlrqipevQGA 424
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 429 IVVVDRFSGEVRAMVGGSEPQFAGYNRAMQARRSIGSLAKPATYLTALSqpKIYRLNTWIADAPIALRQP-NGQVWSPQN 507
Cdd:COG5009 425 LVALDPHTGAVLALVGGFDFEQSKFNRATQAKRQPGSSFKPFVYAAALD--NGYTPATIINDAPIVFDDGgGGGVWRPKN 502
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 508 DDRRYseSGRVMLVDALTRSMNVPTVNLGMALGLPAVTETWIKLGVPkDQLHPVPAMLLGALNLTPIEVAQAFQTIASGG 587
Cdd:COG5009 503 YSGKF--YGPTTLREALEKSRNLVTVRLLQDVGIDYVIDYAERFGIY-SKLPPNLSLALGSGEVTPLEMARAYAVFANGG 579
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 588 NRAPLSALRSVIAEDGKVLYQSFPQ---------------------AERAVPAQAAYLTLWTMQQVVQRGTGRqlGAKYP 646
Cdd:COG5009 580 YRVEPYLIDRIEDRNGKVIYRADPAracedcdaaewdgaeprlpdpAEQVIDPRTAYQMTSMLRGVVQRGTGR--RARAL 657
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 647 NLHLAGKTGTTNNNVDTWFAGIDGSTVTITWVGRDNNQP--TKLYGASGAMSIYQRY----LANQTPTPlnLVPPEDIAD 720
Cdd:COG5009 658 GRDIAGKTGTTNDSKDAWFVGFTPDLVAGVWVGFDDPRSlgRGETGGRAALPIWIDFmkaaLKDKPEKP--FPVPEGIVT 735
|
....
gi 2030744284 721 MGVD 724
Cdd:COG5009 736 VRID 739
|
|
| PbpC |
COG4953 |
Membrane carboxypeptidase/penicillin-binding protein PbpC [Cell wall/membrane/envelope ... |
162-694 |
1.45e-81 |
|
Membrane carboxypeptidase/penicillin-binding protein PbpC [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 443980 [Multi-domain] Cd Length: 773 Bit Score: 277.48 E-value: 1.45e-81
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 162 SPNGEQRLFVPRSGFPDLLVDTLLATEDRHFYEHDGISLYSIGRAVLANLTAGRTVQGASTLTQQLVKnLFLSSERSYWR 241
Cdd:COG4953 59 AADGQWRLPVPLDEVSPRYLQALLAYEDRRFYYHPGVNPLALLRAAWQNLRSGRIVSGGSTLTMQVAR-LLEPRPRTLSG 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 242 KANEAYMALIMDARYSKDRILELYMNEVYLGqsgdNEIRGFPLASLYYFGRPVEELSLDQQALLVGMVKGASIYNPWRNP 321
Cdd:COG4953 138 KLRQILRALQLERRYSKDEILELYLNLAPYG----GNIEGVEAASLAYFGKPPSRLSLAEAALLAVLPQAPSRRRPDRNP 213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 322 KLALERRNLVLRLLQQQQIIDQELYDMLSARPLGVQPRggvisPQPAFM-QLVRQELQAKLGDKVkdlsgvkIFTTFDSV 400
Cdd:COG4953 214 ERARAARDRVLARLAEAGVIDAEEAALALLEPVPARRR-----PLPQLApHLARRLLRQLPGGTR-------IRTTLDAG 281
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 401 AQDAAEKAAVEGIPALKKQRKLSdleTAIVVVDRFSGEVRAMVgGSEPQF----AGYNRAMQARRSIGSLAKPATYLTAL 476
Cdd:COG4953 282 LQRRLERLVRRYVRRLKQNGIHN---AAVLVVDNRTGEVLAYV-GSADFFdasrQGQVDMVRALRSPGSTLKPFLYGLAL 357
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 477 SQ----PkiyrlNTWIADAPialRQPNGqvWSPQNDDRRYseSGRVMLVDALTRSMNVPTVNLGMALGLPAVTETWIKLG 552
Cdd:COG4953 358 DQglihP-----ETLLADVP---TSFGG--YRPENFDGTF--QGPVSAREALARSLNIPAVRLLEALGPARFYARLRRAG 425
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 553 VP---KDQLHPVPAMLLGALNLTPIEVAQAFQTIASGGNRAPLSALRSviaedgkvlyQSFPQAERAVPAQAAYLTLWTM 629
Cdd:COG4953 426 LRlllPPAEHYGLSLILGGAEVTLEELVGLYAALARGGEARPLRLLAG----------EPASPGRRLLSPGAAWLVRDIL 495
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2030744284 630 QQVVQRGTGRQLGAKYPNLHLAGKTGTTNNNVDTWFAGIDGSTVTITWVGRDNNQPTK-LYGASGA 694
Cdd:COG4953 496 SDVPRPDGAFGWRALDSPPPIAWKTGTSYGFRDAWAVGFTGRYTVGVWVGNPDGTPVPgLTGAEAA 561
|
|
| Transgly |
pfam00912 |
Transglycosylase; The penicillin-binding proteins are bifunctional proteins consisting of ... |
158-329 |
1.27e-73 |
|
Transglycosylase; The penicillin-binding proteins are bifunctional proteins consisting of transglycosylase and transpeptidase in the N- and C-terminus respectively. The transglycosylase domain catalyzes the polymerization of murein glycan chains.
Pssm-ID: 459993 [Multi-domain] Cd Length: 177 Bit Score: 237.42 E-value: 1.27e-73
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 158 TMISSPNGEQRLFVPRSGFPDLLVDTLLATEDRHFYEHDGISLYSIGRAVLANLTAGRTVQGASTLTQQLVKNLFLSSER 237
Cdd:pfam00912 3 TLLAELGEENREYVPLDDIPPALKNAVLAIEDRRFYEHGGVDPKGIARALLSNLRSGRIVQGGSTITQQLAKNLFLTPER 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 238 SYWRKANEAYMALIMDARYSKDRILELYMNEVYLGqsgdNEIRGFPLASLYYFGRPVEELSLDQQALLVGMVKGASIYNP 317
Cdd:pfam00912 83 TLTRKLKEAVLALKLERRYSKDEILEAYLNTVYFG----RGAYGIEAAARAYFGKDASDLTLAEAALLAGLPQAPSRYNP 158
|
170
....*....|..
gi 2030744284 318 WRNPKLALERRN 329
Cdd:pfam00912 159 LRNPERAKRRRN 170
|
|
| PBP_1c |
TIGR02073 |
penicillin-binding protein 1C; This subfamily of the penicillin binding proteins includes the ... |
153-714 |
3.61e-71 |
|
penicillin-binding protein 1C; This subfamily of the penicillin binding proteins includes the member from E. coli designated penicillin-binding protein 1C. Members have both transglycosylase and transpeptidase domains and are involved in forming cross-links in the late stages of peptidoglycan biosynthesis. All members of this subfamily are presumed to have the same basic function. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]
Pssm-ID: 273954 [Multi-domain] Cd Length: 727 Bit Score: 247.72 E-value: 3.61e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 153 DPRLITMISSPNGEQRLFVPRSGFPDLLVDTLLATEDRHFYEHDGISLYSIGRAVLANLTAGRTVQGASTLTQQLVKNLF 232
Cdd:TIGR02073 18 HGTLLRALLANDGQWRLPVPLEDISPKFLQALLLYEDKRFYWHPGVNPLALLRAAWQNLTNGRRVSGGSTLTMQLARLLD 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 233 LSSERSYWRKANEAYMALIMDARYSKDRILELYMNevyLGQSGDNeIRGFPLASLYYFGRPVEELSLDQQALLVGMVKGA 312
Cdd:TIGR02073 98 PELSRTLTGKLRQMWRAIQLEARYSKREILEAYLN---LAPYGGN-LEGLRAASLIYFGKEPSSLSLAEAALLAALPQAP 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 313 SIYNPWRNPKLALERRNLVLRLLQQQQIIDQELYDMLSARPLGVQPRggvisPQPAFMQLVRQELqakLGDKVKDLSGVK 392
Cdd:TIGR02073 174 SARRLDRLPKAAKAARDRLLDRMVEQGPDDSEQVALAALEPLPALPE-----PLPQLAPHFALKL---LRARPEIASVIV 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 393 ifTTFDSVAQDAAEKAAVEGIPALKKQRKLSdleTAIVVVDRFSGEVRAMVGGSE---PQFAGYNRAMQARRSIGSLAKP 469
Cdd:TIGR02073 246 --STLDADLQRRLEELARRYLSALRPRGISN---LAILVVDNRSGAVLAYVGSADffdDSNSGQVDGVRAPRSPGSTLKP 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 470 ATYLTALSQPKIYRlNTWIADAPIALrqpngQVWSPQNDDRRYSesGRVMLVDALTRSMNVPTVNLGMALGLPAVTETWI 549
Cdd:TIGR02073 321 FLYALALDDGLLHP-DSLLKDVPLRF-----GDYAPENFDKTFH--GPVPAREALARSLNIPAVRLLERVGPPRFADFLR 392
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 550 KLGVP---KDQLHPVPAMLLGALNLTPIEVAQAFQTIASGGNRAPLSALRSViaedgkvlyQSFPQAERAVPAQAAYLTL 626
Cdd:TIGR02073 393 QAGLNllkPKSDYYGLSLALGGAEITLQDLANLYAMLANQGLSGPLRFLQTD---------AKRPERERLLSPGAAWIVL 463
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 627 WTMQQVVQRGTGRQLGAKYPNLHLAGKTGTTNNNVDTWFAGIDGSTVTITWVGRDNNQPT-KLYGASGAMSIY------- 698
Cdd:TIGR02073 464 DILKDRPRPDDTLPLSALPTRLPLAWKTGTSYGFRDAWAAGVSGRYTIGVWVGNFDGKPNpGFFGAAAAAPLLfdildal 543
|
570
....*....|....*.
gi 2030744284 699 QRYLANQTPTPLNLVP 714
Cdd:TIGR02073 544 QASEASTLPRPLKEVP 559
|
|
| mrcA |
PRK11636 |
penicillin-binding protein 1a; Provisional |
165-682 |
6.16e-54 |
|
penicillin-binding protein 1a; Provisional
Pssm-ID: 183248 [Multi-domain] Cd Length: 850 Bit Score: 200.74 E-value: 6.16e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 165 GEQR-LFVPRSGFPDLLVDTLLATEDRHFYEHDGISLYSIGRAVLANLTAGRTVQGASTLTQQLVKNLFLSSERSYWRKA 243
Cdd:PRK11636 62 GEKRrIPLTLDQIPPEMVKAFIATEDSRFYEHHGVDPVGIFRAASVALFSGHASQGASTITQQLARNFFLSPERTLMRKI 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 244 NEAYMALIMDARYSKDRILELYMNEVYLGqsgdNEIRGFPLASLYYFGRPVEELSLDQQALLVGMVKGASIYNPWRNPKL 323
Cdd:PRK11636 142 KEAFLAIRIEQLLTKDEILELYLNKIYLG----YRAYGVGAAAQVYFGKTVDQLTLSEMAVIAGLPKAPSTFNPLYSMDR 217
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 324 ALERRNLVLRLLQQQQIIDQELYDMLSARPLGVQPRGGVIS-PQPAFMQLVRQELQAKLGDKVKDlSGVKIFTTFDSVAQ 402
Cdd:PRK11636 218 AVARRNVVLSRMLDEGYITQAQYDQARSEPIVANYHAPEIAfSAPYLSEMVRQEMYNRYGENAYE-DGYRVYTTITRKVQ 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 403 DAAEKAAVEG------------------------------IPALKKQ--------------------------------- 419
Cdd:PRK11636 297 QAAQQAVRNNvldydmrhgyrgpanvlwkvgesawdnkkiTDTLKALptygpllpavvtsanpqeatamladgssvalpm 376
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 420 ----------------------------------RK---------LSDLETAIVVVDRFSGEVRAMVGGSEPQFAGYNRA 456
Cdd:PRK11636 377 egvrwarpyrsdtqqgptprkvtdvvqtgqqiwvRQvddawwlaqVPDVNSALVSINPQNGAVMALVGGFDFNQSKFNRA 456
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 457 MQARRSIGSLAKPATYLTALSqpKIYRLNTWIADAPIALRQPN-GQVWSPQNDDRRYseSGRVMLVDALTRSMNVPTVNL 535
Cdd:PRK11636 457 TQALRQVGSNIKPFLYTAAMD--KGLTLASMLNDVPISRWDAGaGSDWRPKNSPPQY--AGPIRLRQGLGQSKNVVMVRA 532
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 536 GMALGLPAVTETWIKLGVPKDQLHPVPAMLLGALNLTPIEVAQAFQTIASGGNRAPLSALRSVIAEDGKVLYQS------ 609
Cdd:PRK11636 533 MRAMGVDYAAEYLQRFGFPAQNIVHTESLALGSASFTPMQVARGYAVMANGGFLVDPYFISKIENDQGGVIFEAkpkvac 612
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 610 --------------------------------------FPQAERAVPAQAAyltlwtmQQVVQR---------------- 635
Cdd:PRK11636 613 pecdipviygdtqksnvlenddvenvatsqeqqnssvpMPQLEQANQALVA-------QNGAQEyaphvintplafliks 685
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 636 -------------GTGRQLGAKYPNLHLAGKTGTTNNNVDTWFAGIDGSTVTITWVGRDN 682
Cdd:PRK11636 686 alntnifgepgwmGTGWRAGRDLKRRDIGGKTGTTNSSKDAWFSGYGPGVVTSVWIGFDD 745
|
|
| mono_pep_trsgly |
TIGR02070 |
monofunctional biosynthetic peptidoglycan transglycosylase; This family is one of the ... |
167-320 |
3.15e-33 |
|
monofunctional biosynthetic peptidoglycan transglycosylase; This family is one of the transglycosylases involved in the late stages of peptidoglycan biosynthesis. Members tend to be small, about 240 amino acids in length, and consist almost entirely of a domain described by pfam00912 for transglycosylases. Species with this protein will have several other transglycosylases as well. All species with this protein are Proteobacteria that produce murein (peptidoglycan). [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]
Pssm-ID: 273951 [Multi-domain] Cd Length: 224 Bit Score: 127.58 E-value: 3.15e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 167 QRLFVPRSGFPDLLVDTLLATEDRHFYEHDGISLYSIGRAVLANLTAGRTVQGASTLTQQLVKNLFLSSERSYWRKANEA 246
Cdd:TIGR02070 54 QHRWRPYDQISPNLKRAVIASEDAKFVEHHGFDWEAIQDALEKNEKSGKVVRGGSTISQQLAKNLFLWSGRSYLRKGLEA 133
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2030744284 247 YMALIMDARYSKDRILELYMNEVYLGqsgdNEIRGFPLASLYYFGRPVEELSLDQQALLVGMVKGASIYNPWRN 320
Cdd:TIGR02070 134 WATWMLETWWSKQRILEVYLNSVEWG----NGVFGAEAAARYYFKRSASNLTRGQAARLAAVLPNPKYYDENRP 203
|
|
| UB2H |
pfam14814 |
Bifunctional transglycosylase second domain; UB2H is the second domain of the ... |
68-152 |
1.90e-30 |
|
Bifunctional transglycosylase second domain; UB2H is the second domain of the transglycosylases, or penicillin-binding proteins PBP1bs)), the multi-domain membrane proteins essential for cell wall synthesis that are targeted by penicillin antibiotics. The exact function of the UB2H domain is uncertain, but it may act as the binding component of PBP1b with different binding partners, or it may participate in the regulation between DNA repair and/or synthesis and cell wall formation during the bacterial cell cycle.
Pssm-ID: 434234 [Multi-domain] Cd Length: 85 Bit Score: 114.58 E-value: 1.90e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 68 LEPDMTISKNEMVKLLEATQYRQVSKMTRPGEFTVQANSIEMIRRPFDFPDSKEGQVRARLTFDGDHLATIVNMENNRQF 147
Cdd:pfam14814 1 LYPGQALSAAQLEQELKLLGYRKVSNPTRPGEYSVSGNRIELYRRGFDFPDGAEPARRVRLRFAGGRVARLQDLDTGRDL 80
|
....*
gi 2030744284 148 GFFRL 152
Cdd:pfam14814 81 ALVRL 85
|
|
| PRK11240 |
PRK11240 |
penicillin-binding protein 1C; Provisional |
184-685 |
1.22e-25 |
|
penicillin-binding protein 1C; Provisional
Pssm-ID: 183049 [Multi-domain] Cd Length: 772 Bit Score: 113.26 E-value: 1.22e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 184 LLATEDRHFYEHDGISLYSIGRAVLANLTAGRTVQGASTLTQQlVKNLFLSSERSYWRKANEAYMALIMDARYSKDRILE 263
Cdd:PRK11240 78 LINYEDRWFWKHPGVNPFSVARAAWQDLTSGRVISGGSTLTMQ-VARLLDPHPRTFGGKIRQLWRALQLEWHLSKREILT 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 264 LYMNEVYLGQSgdneIRGFPLASLYYFGRPVEELSLDQQALLVGMVKGASIYNPWRNPKLALERRNLVLRLLQQQQIIDQ 343
Cdd:PRK11240 157 LYLNRAPFGGT----LQGIGAASWAYLGKSPANLSYAEAALLAVLPQAPSRLRPDRWPERAEAARNKVLERMAEQGVWSA 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 344 ELYDMLSARPLGVQPRGgviSPQPAFMqLVRQELQAKLGDKVKdlsgvkifTTFDSVAQDAAEKAAVEGipalkKQRKLS 423
Cdd:PRK11240 233 EQVKESREEPVWLAPRQ---MPQLAPL-FARMMLGKSKSDKIV--------TTLDAGLQRRLEDLALNW-----KGRLPP 295
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 424 DLETAIVVVDRFSGEVRAMVGG----SEPQFaGYNRAMQARRSIGSLAKPATYLTALSQPKIYRlNTWIADAPialRQPN 499
Cdd:PRK11240 296 RSSLAMIVVDHTDMAVRGWVGSvdlnDDSRF-GHVDMVNAIRSPGSVLKPFVYGLALDDGLIHP-ASLLQDVP---RRTG 370
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 500 GqvWSPQNDDRRYseSGRVMLVDALTRSMNVPTV----------------NLGMALGLPAVTEtwiklgvpkdqlhPVPA 563
Cdd:PRK11240 371 D--YRPGNFDSGF--HGPVSMSEALVRSLNLPAVqvleaygpkrfaaklrNVGLPLYLPAGAE-------------PNLS 433
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 564 MLLGALNLTPIEVAQAFQTIASGGNRAPLSalrsviaedgkvLYQSFPQAERAV-PAQAAYLTLWTMQQVVQRGTGRQLG 642
Cdd:PRK11240 434 LILGGAGARLEDMVAAYSAFARHGKAAKLR------------LQPDDPLLERPLmSPGAAWIIRRIMADEAQPLPDAALP 501
|
490 500 510 520
....*....|....*....|....*....|....*....|...
gi 2030744284 643 AKYPnlhLAGKTGTTNNNVDTWFAGIDGSTVTITWVGRDNNQP 685
Cdd:PRK11240 502 RVVP---LAWKTGTSYGYRDAWAIGVNARYVIGIWTGRPDGTP 541
|
|
| PRK13481 |
PRK13481 |
glycosyltransferase; Provisional |
170-316 |
1.43e-25 |
|
glycosyltransferase; Provisional
Pssm-ID: 184078 [Multi-domain] Cd Length: 232 Bit Score: 106.04 E-value: 1.43e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 170 FVPRSGFPDLLVDTLLATEDRHFYEHDGISLYSIGRAVLANLtAGRTVQGASTLTQQLVKNLFLSSERSYWRKANEAYMA 249
Cdd:PRK13481 47 FVSADNMPEYVKGAFISMEDERFYKHHGFDLKGTTRALFSTI-SDRDVQGGSTITQQVVKNYFYDNERSFTRKVKELFVA 125
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2030744284 250 LIMDARYSKDRILELYMNEVYLgqsGDNE--IRGfplASLYYFGRPVE-------ELSLDQQALLVGMVKGASIYN 316
Cdd:PRK13481 126 HRVEKQYSKNEILSFYLNNIYF---GDNQytLEG---AANHYFGTTVNknsttmsHITVLQSAILASKVNAPSVYN 195
|
|
| Transpeptidase |
pfam00905 |
Penicillin binding protein transpeptidase domain; The active site serine (residue 337 in Swiss: ... |
428-668 |
1.06e-22 |
|
Penicillin binding protein transpeptidase domain; The active site serine (residue 337 in Swiss:P14677) is conserved in all members of this family.
Pssm-ID: 425939 [Multi-domain] Cd Length: 296 Bit Score: 99.41 E-value: 1.06e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 428 AIVVVDRFSGEVRAMVGG-----SEPQFAGYNRAMQARRSIGSLAKPATYLTALSQpKIYRLNTWIADAPIalRQPNGQV 502
Cdd:pfam00905 2 SAVVLDPKTGEVLAMVGKpsydpNGFIGPLRNRAVTSRYEPGSTFKPFTALAALDN-GVLKPDETIFDWPG--KQQGGKS 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 503 WSPQNDDRryseSGRVMLVDALTRSMNVPTVNLGMALGLPAVTETWIKLGVPKDQL---------HPVPAMLLGA----- 568
Cdd:pfam00905 79 IGDWNQDQ----VGIGTLRQALEYSSNWYMQKLAQKLGADKLRSYLKKFGYGNKTGiglpgenagYLTPYWLEGAtasfg 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 569 --LNLTPIEVAQAFQTIASGGNRAPLSALRSVIAEDgkvlyQSFPQAERAVPAQAAYLTLWTMQQVVQRGTGRQLGAKyP 646
Cdd:pfam00905 155 igLTITPLQQAQAYAAIANGGKLVPPHLVKSIEDKV-----DPKVLNKLPISKSTAEKVKDMLRLVVNDGTGTGTAAV-P 228
|
250 260 270
....*....|....*....|....*....|...
gi 2030744284 647 NLHLAGKTGTT-----------NNNVDTWFAGI 668
Cdd:pfam00905 229 GYKVAGKTGTAqvagpkgggyyDGAQIGWFVGY 261
|
|
| FtsI |
COG0768 |
Cell division protein FtsI, peptidoglycan transpeptidase (Penicillin-binding protein 2) [Cell ... |
381-668 |
2.51e-22 |
|
Cell division protein FtsI, peptidoglycan transpeptidase (Penicillin-binding protein 2) [Cell cycle control, cell division, chromosome partitioning, Cell wall/membrane/envelope biogenesis];
Pssm-ID: 440531 [Multi-domain] Cd Length: 568 Bit Score: 101.82 E-value: 2.51e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 381 LGDKVKDLSGVKIFTTFDSVAQDAAEKAavegipaLKKQRKLSDLET-AIVVVDRFSGEVRAMVggSEP-----QFAGY- 453
Cdd:COG0768 209 LGEEKPPVPGKDLVLTIDSDLQKIAEEA-------LKKAVEEYKAKSgAVVVMDPKTGEILAMA--SYPsfdpnLFVGGp 279
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 454 -----NRAMQARRSIGSLAKPATYLTALSQpKIYRLNTWIADapialrqpNGQVwspQNDDRRYSES-----GRVMLVDA 523
Cdd:COG0768 280 deplrNRAVQGTYEPGSTFKPFTAAAALEE-GVITPDTTFDC--------PGYY---RVGGRTIRDWdrgghGTLTLTEA 347
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 524 LTRSMNVPTVNLGMALGLPAVTETWIKLG----------------VP-KDQLHPVPAMLLG---ALNLTPIEVAQAFQTI 583
Cdd:COG0768 348 LAKSSNVGFYKLALRLGIDKLYDYLKKFGlgqktgidlpgeasglLPsPKRWYPGETATMSigqGLSVTPLQLAQAYAAI 427
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 584 ASGGNRAPLSALRSVIAEDGKVLYQSFPQAERAVPAQAAYLTLWTMQQVVQ--RGTGRqlGAKYPNLHLAGKTGT----- 656
Cdd:COG0768 428 ANGGVLVKPHLVKEIVDPDGEVVKEEPEVLRRVISPETAETVREGMEGVVNepGGTAR--RAAIPGYRVAGKTGTaqvvd 505
|
330
....*....|....*...
gi 2030744284 657 ------TNNNVDTWFAGI 668
Cdd:COG0768 506 ignggyYKGRHIASFVGF 523
|
|
| pbp2_mrdA |
TIGR03423 |
penicillin-binding protein 2; Members of this protein family are penicillin-binding protein 2 ... |
383-656 |
2.01e-11 |
|
penicillin-binding protein 2; Members of this protein family are penicillin-binding protein 2 (PBP-2), a protein whose gene (designated pbpA or mrdA) generally is found next to the gene for RodA, a protein required for rod (bacillus) shape in many bacteria. PBP-2 acts as a transpeptidase for cell elongation (hence, rod-shape). [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]
Pssm-ID: 274573 [Multi-domain] Cd Length: 592 Bit Score: 67.55 E-value: 2.01e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 383 DKVKDLSGVKIFTTFDSVAQDAAEKAavegipaLKKQRklsdleTAIVVVDRFSGEVRAMVggSEPQF-----------A 451
Cdd:TIGR03423 218 SRVPPVPGKDLVLTIDARLQQAAEKA-------LGGRR------GAVVVMDPRTGEILAMV--STPSFdpnlfvdgissK 282
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 452 GY------------NRAMQARRSIGSLAKPATYLTALsQPKIYRLNTWIADaPIALRQPNgQVWspqNDDRRYSEsGRVM 519
Cdd:TIGR03423 283 DYkallndpdrpllNRAIQGVYPPGSTFKPVVALAAL-EEGVITPETRIYC-PGYFQLGG-RRF---RCWKRGGH-GRVD 355
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 520 LVDALTRSMNVPTVNLGMALGLPAVTETWIKLG----------------VP----KDQLHP---VPAMLL------GALN 570
Cdd:TIGR03423 356 LRKAIEESCDVYFYQLALRLGIDKIAEYAKRFGfgqktgidlpgeksglVPsrewKRKRFGqpwYPGDTLnvsigqGYVL 435
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2030744284 571 LTPIEVAQAFQTIASGGNRAPLSALRSVIAEDGKVLYQSFPQAERAVPAQAAYLTLWT--MQQVVQ--RGTGR--QLGAK 644
Cdd:TIGR03423 436 VTPLQLAVATAALANGGKLYKPHLVKSIEDPDGGVVRRTEPEVLRPLPISPENLDVVRegMRDVVNgpGGTARraRLGLP 515
|
330
....*....|..
gi 2030744284 645 YPnlhLAGKTGT 656
Cdd:TIGR03423 516 YK---MAGKTGT 524
|
|
| |
