ID 496730 - BioProject

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Accession: PRJEB26202 ID: 496730

EMG produced TPA metagenomics assembly of the Marine microbial communities from the Deep Atlantic Ocean - MP0203 metagenome (marine metagenome) data set.

The marine metagenome Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set: PRJNA329987. This project includes samples from the following biomes: Environmental, Aquatic, Marine.

Accession	PRJEB26202
Data Type	Genome sequencing and assembly
Scope	Monoisolate
Keyword	TPA:assembly
Publications	Mitchell AL et al., "EBI Metagenomics in 2017: enriching the analysis of microbial communities, from sequence reads to assemblies.", Nucleic Acids Res, 2018 Jan 4;46(D1):D726-D735
Submission	Registration date: 16-Oct-2018 EMG

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	1133
WGS master	19
Publications
PubMed	1
PMC	1
Other datasets
BioSample	19
Assembly	18

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

18
18

Assembly	WGS	BioSample	Taxonomy
GCA_950070155.1	CATMLG000000000	SAMEA112958188	Alteromonas australica
GCA_950070055.1	CATMKS000000000	SAMEA112958179	Alteromonas macleodii
GCA_950066335.1	CATMFN000000000	SAMEA112958173	Mesonia mobilis
GCA_950070005.1	CATMKO000000000	SAMEA112958175	uncultured Candidatus Poseidoniales archaeon
GCA_950069355.1	CATMJF000000000	SAMEA112958172	uncultured Candidatus Poseidoniales archaeon
GCA_950069935.1	CATMJW000000000	SAMEA112958185	uncultured Dehalococcoidia bacterium
GCA_950068505.1	CATMIL000000000	SAMEA112958177	uncultured Dehalococcoidia bacterium
GCA_950070075.1	CATMKZ000000000	SAMEA112958180	uncultured Fidelibacterota bacterium
GCA_950070105.1	CATMKW000000000	SAMEA112958184	uncultured Fidelibacterota bacterium
GCA_950061585.1	CATLWN000000000	SAMEA112958187	uncultured Gammaproteobacteria bacterium
GCA_950068645.1	CATMIO000000000	SAMEA112958181	uncultured Halomonas sp.
GCA_950065705.1	CATMDO000000000	SAMEA112958186	uncultured Marinobacter sp.
GCA_950068515.1	CATMIE000000000	SAMEA112958183	uncultured Oceanospirillaceae bacterium
GCA_950065775.1	CATMDS000000000	SAMEA112958178	uncultured Pseudoalteromonas sp.
GCA_950068655.1	CATMIG000000000	SAMEA112958189	uncultured Pseudoalteromonas sp.
GCA_950072895.1	CATMPT000000000	SAMEA112958182	uncultured Pseudomonadota bacterium
GCA_950070115.1	CATMLB000000000	SAMEA112958174	uncultured Pseudomonadota bacterium
GCA_950068675.1	CATMIF000000000	SAMEA112958176	uncultured archaeon

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EMG produced TPA metagenomics assembly of the Marine microbial communities from the Deep Atlantic Ocean - MP0203 metagenome (marine metagenome) data set.

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