ID 901845 - BioProject

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Accession: PRJEB57440 ID: 901845

EMG produced TPA metagenomics assembly of PRJNA753725 data set (Changes of intestinal resistance genome induced by diet).

The Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set PRJNA753725, and was assembled with SPAdes v3. More...

Accession	PRJEB57440
Data Type	Genome sequencing and assembly
Scope	Monoisolate
Keyword	TPA:assembly
Publications	Mitchell AL et al., "EBI Metagenomics in 2017: enriching the analysis of microbial communities, from sequence reads to assemblies.", Nucleic Acids Res, 2018 Jan 4;46(D1):D726-D735
Submission	Registration date: 15-Nov-2022 EMG

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	3136
WGS master	125
Publications
PubMed	1
PMC	1
Other datasets
BioSample	125
Assembly	125

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

125
125

Assembly	WGS	BioSample	Taxonomy
GCA_947368015.1	CANBEV000000000	SAMEA112147252	Akkermansia muciniphila
GCA_947368395.1	CANBHM000000000	SAMEA112147204	Bacteroides acidifaciens
GCA_947368045.1	CANBFP000000000	SAMEA112147244	Bacteroides acidifaciens
GCA_947368095.1	CANBGN000000000	SAMEA112147229	Butyricimonas virosa
GCA_947368305.1	CANBHJ000000000	SAMEA112147211	Clostridioides difficile
GCA_947368645.1	CANBIL000000000	SAMEA112147213	Escherichia coli
GCA_947368875.1	CANBJI000000000	SAMEA112147266	Helicobacter hepaticus
GCA_947367775.1	CANBEY000000000	SAMEA112147226	Mucispirillum schaedleri
GCA_947367735.1	CANBFH000000000	SAMEA112147224	Muribaculum intestinale
GCA_947367975.1	CANBFC000000000	SAMEA112147235	Parabacteroides goldsteinii
GCA_947368825.1	CANBIX000000000	SAMEA112147274	Parabacteroides merdae
GCA_947368125.1	CANBGI000000000	SAMEA112147205	Streptococcus vestibularis
GCA_947367965.1	CANBFY000000000	SAMEA112147237	Streptococcus vestibularis
GCA_947368285.1	CANBHC000000000	SAMEA112147212	Thomasclavelia cocleata
GCA_947367715.1	CANBEU000000000	SAMEA112147210	Turicimonas muris
GCA_947367675.1	CANBFG000000000	SAMEA112147209	[Clostridium] innocuum
GCA_947368865.1	CANBJF000000000	SAMEA112147167	uncultured Alistipes sp.
GCA_947368725.1	CANBIS000000000	SAMEA112147277	uncultured Alistipes sp.
GCA_947368545.1	CANBHZ000000000	SAMEA112147190	uncultured Alistipes sp.
GCA_947368415.1	CANBHO000000000	SAMEA112147254	uncultured Alistipes sp.
GCA_947368115.1	CANBGF000000000	SAMEA112147185	uncultured Alistipes sp.
GCA_947368165.1	CANBGO000000000	SAMEA112147172	uncultured Alistipes sp.
GCA_947368525.1	CANBHW000000000	SAMEA112147196	uncultured Alistipes sp.
GCA_947368885.1	CANBJJ000000000	SAMEA112147267	uncultured Alistipes sp.
GCA_947368405.1	CANBHN000000000	SAMEA112147217	uncultured Anaerotruncus sp.
GCA_947367755.1	CANBFW000000000	SAMEA112147230	uncultured Angelakisella sp.
GCA_947368315.1	CANBIO000000000	SAMEA112147249	uncultured Bacillota bacterium
GCA_947367835.1	CANBFU000000000	SAMEA112147242	uncultured Bacillota bacterium
GCA_947367685.1	CANBFN000000000	SAMEA112147228	uncultured Bacillota bacterium
GCA_947368565.1	CANBID000000000	SAMEA112147248	uncultured Bacillota bacterium
GCA_947367995.1	CANBFR000000000	SAMEA112147253	uncultured Bacteroides sp.
GCA_947367875.1	CANBFB000000000	SAMEA112147164	uncultured Bacteroides sp.
GCA_947368435.1	CANBHR000000000	SAMEA112147208	uncultured Blautia sp.
GCA_947367795.1	CANBER000000000	SAMEA112147219	uncultured Candidatus Saccharibacteria bacterium
GCA_947368805.1	CANBIT000000000	SAMEA112147271	uncultured Candidatus Saccharibacteria bacterium
GCA_947368485.1	CANBHV000000000	SAMEA112147247	uncultured Clostridia bacterium
GCA_947368185.1	CANBHB000000000	SAMEA112147203	uncultured Clostridia bacterium
GCA_947367905.1	CANBET000000000	SAMEA112147166	uncultured Clostridia bacterium
GCA_947368355.1	CANBHD000000000	SAMEA112147214	uncultured Clostridia bacterium
GCA_947368375.1	CANBGS000000000	SAMEA112147197	uncultured Clostridia bacterium
GCA_947367935.1	CANBFF000000000	SAMEA112147255	uncultured Clostridia bacterium
GCA_947368655.1	CANBIN000000000	SAMEA112147250	uncultured Clostridia bacterium
GCA_947368615.1	CANBIH000000000	SAMEA112147193	uncultured Clostridia bacterium
GCA_947368815.1	CANBIY000000000	SAMEA112147258	uncultured Clostridia bacterium
GCA_947368155.1	CANBGP000000000	SAMEA112147178	uncultured Clostridia bacterium
GCA_947368635.1	CANBIK000000000	SAMEA112147216	uncultured Clostridia bacterium
GCA_947367705.1	CANBFL000000000	SAMEA112147222	uncultured Clostridia bacterium
GCA_947368675.1	CANBIP000000000	SAMEA112147259	uncultured Clostridia bacterium
GCA_947368085.1	CANBGJ000000000	SAMEA112147206	uncultured Clostridia bacterium
GCA_947368605.1	CANBIJ000000000	SAMEA112147160	uncultured Clostridia bacterium
GCA_947368055.1	CANBGL000000000	SAMEA112147187	uncultured Clostridium sp.
GCA_947368275.1	CANBHG000000000	SAMEA112147174	uncultured Clostridium sp.
GCA_947368535.1	CANBHY000000000	SAMEA112147200	uncultured Clostridium sp.
GCA_947367655.1	CANBEZ000000000	SAMEA112147232	uncultured Desulfovibrio sp.
GCA_947368455.1	CANBHT000000000	SAMEA112147239	uncultured Desulfovibrio sp.
GCA_947367895.1	CANBFM000000000	SAMEA112147243	uncultured Dorea sp.
GCA_947367805.1	CANBFT000000000	SAMEA112147218	uncultured Enterorhabdus sp.
GCA_947368365.1	CANBHH000000000	SAMEA112147207	uncultured Erysipelotrichaceae bacterium
GCA_947368915.1	CANBJK000000000	SAMEA112147263	uncultured Erysipelotrichaceae bacterium
GCA_947368215.1	CANBHF000000000	SAMEA112147215	uncultured Eubacterium sp.
GCA_947368245.1	CANBGY000000000	SAMEA112147194	uncultured Eubacterium sp.
GCA_947368265.1	CANBHL000000000	SAMEA112147192	uncultured Eubacterium sp.
GCA_947367725.1	CANBFZ000000000	SAMEA112147231	uncultured Eubacterium sp.
GCA_947368345.1	CANBGT000000000	SAMEA112147169	uncultured Eubacterium sp.
GCA_947367985.1	CANBFV000000000	SAMEA112147236	uncultured Eubacterium sp.
GCA_947368235.1	CANBGZ000000000	SAMEA112147181	uncultured Lachnoclostridium sp.
GCA_947368585.1	CANBIF000000000	SAMEA112147179	uncultured Lachnoclostridium sp.
GCA_947367695.1	CANBGA000000000	SAMEA112147233	uncultured Lachnoclostridium sp.
GCA_947368005.1	CANBGD000000000	SAMEA112147234	uncultured Lachnoclostridium sp.
GCA_947368255.1	CANBGR000000000	SAMEA112147257	uncultured Lachnoclostridium sp.
GCA_947368695.1	CANBIR000000000	SAMEA112147264	uncultured Lachnospiraceae bacterium
GCA_947368835.1	CANBJO000000000	SAMEA112147265	uncultured Lachnospiraceae bacterium
GCA_947368515.1	CANBIB000000000	SAMEA112147177	uncultured Lachnospiraceae bacterium
GCA_947367945.1	CANBFD000000000	SAMEA112147241	uncultured Lachnospiraceae bacterium
GCA_947368105.1	CANBGM000000000	SAMEA112147225	uncultured Lachnospiraceae bacterium
GCA_947368685.1	CANBIQ000000000	SAMEA112147272	uncultured Lachnospiraceae bacterium
GCA_947368325.1	CANBHA000000000	SAMEA112147240	uncultured Lachnospiraceae bacterium
GCA_947368065.1	CANBGH000000000	SAMEA112147168	uncultured Lachnospiraceae bacterium
GCA_947368135.1	CANBGK000000000	SAMEA112147227	uncultured Lachnospiraceae bacterium
GCA_947368495.1	CANBHX000000000	SAMEA112147191	uncultured Lachnospiraceae bacterium
GCA_947368855.1	CANBJH000000000	SAMEA112147276	uncultured Lachnospiraceae bacterium
GCA_947368175.1	CANBHE000000000	SAMEA112147188	uncultured Lachnospiraceae bacterium
GCA_947367855.1	CANBFE000000000	SAMEA112147245	uncultured Lachnospiraceae bacterium
GCA_947368025.1	CANBGB000000000	SAMEA112147238	uncultured Lachnospiraceae bacterium
GCA_947367955.1	CANBGC000000000	SAMEA112147161	uncultured Lachnospiraceae bacterium
GCA_947368905.1	CANBJL000000000	SAMEA112147176	uncultured Lachnospiraceae bacterium
GCA_947368745.1	CANBIV000000000	SAMEA112147269	uncultured Lachnospiraceae bacterium
GCA_947368775.1	CANBJB000000000	SAMEA112147262	uncultured Lachnospiraceae bacterium
GCA_947368145.1	CANBGQ000000000	SAMEA112147186	uncultured Lachnospiraceae bacterium
GCA_947368205.1	CANBHK000000000	SAMEA112147180	uncultured Lachnospiraceae bacterium
GCA_947368765.1	CANBJE000000000	SAMEA112147268	uncultured Lachnospiraceae bacterium
GCA_947368925.1	CANBJM000000000	SAMEA112147273	uncultured Lachnospiraceae bacterium
GCA_947368505.1	CANBIA000000000	SAMEA112147173	uncultured Lachnospiraceae bacterium
GCA_947368735.1	CANBJC000000000	SAMEA112147260	uncultured Lactobacillus sp.
GCA_947368665.1	CANBIM000000000	SAMEA112147159	uncultured Lactobacillus sp.
GCA_947367785.1	CANBFK000000000	SAMEA112147220	uncultured Muribaculaceae bacterium
GCA_947368705.1	CANBIW000000000	SAMEA112147261	uncultured Muribaculaceae bacterium
GCA_947367865.1	CANBFX000000000	SAMEA112147162	uncultured Muribaculaceae bacterium
GCA_947368425.1	CANBHP000000000	SAMEA112147202	uncultured Muribaculaceae bacterium
GCA_947368795.1	CANBIZ000000000	SAMEA112147279	uncultured Muribaculaceae bacterium
GCA_947368475.1	CANBHU000000000	SAMEA112147256	uncultured Oscillibacter sp.
GCA_947367815.1	CANBFO000000000	SAMEA112147223	uncultured Porphyromonadaceae bacterium
GCA_947368335.1	CANBGX000000000	SAMEA112147170	uncultured Porphyromonadaceae bacterium
GCA_947368625.1	CANBII000000000	SAMEA112147158	uncultured Porphyromonadaceae bacterium
GCA_947368715.1	CANBIU000000000	SAMEA112147281	uncultured Porphyromonadaceae bacterium
GCA_947368075.1	CANBGG000000000	SAMEA112147201	uncultured Porphyromonadaceae bacterium
GCA_947368595.1	CANBIG000000000	SAMEA112147189	uncultured Porphyromonadaceae bacterium
GCA_947368225.1	CANBGU000000000	SAMEA112147163	uncultured Porphyromonadaceae bacterium
GCA_947368845.1	CANBJG000000000	SAMEA112147278	uncultured Porphyromonadaceae bacterium
GCA_947368755.1	CANBJA000000000	SAMEA112147280	uncultured Porphyromonadaceae bacterium
GCA_947367665.1	CANBEW000000000	SAMEA112147183	uncultured Porphyromonadaceae bacterium
GCA_947368895.1	CANBJN000000000	SAMEA112147275	uncultured Porphyromonadaceae bacterium
GCA_947368385.1	CANBHI000000000	SAMEA112147184	uncultured Porphyromonadaceae bacterium
GCA_947368445.1	CANBHQ000000000	SAMEA112147198	uncultured Prevotella sp.
GCA_947367745.1	CANBEX000000000	SAMEA112147221	uncultured Prevotella sp.
GCA_947368195.1	CANBGV000000000	SAMEA112147251	uncultured Roseburia sp.
GCA_947368575.1	CANBIC000000000	SAMEA112147195	uncultured Ruminococcus sp.
GCA_947367885.1	CANBFA000000000	SAMEA112147157	uncultured bacterium
GCA_947367925.1	CANBGE000000000	SAMEA112147246	uncultured bacterium
GCA_947368295.1	CANBGW000000000	SAMEA112147182	uncultured bacterium
GCA_947368555.1	CANBIE000000000	SAMEA112147171	uncultured bacterium
GCA_947368465.1	CANBHS000000000	SAMEA112147175	uncultured bacterium
GCA_947367765.1	CANBFS000000000	SAMEA112147199	uncultured bacterium
GCA_947368785.1	CANBJD000000000	SAMEA112147270	uncultured bacterium
GCA_947367915.1	CANBFQ000000000	SAMEA112147165	uncultured bacterium

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EMG produced TPA metagenomics assembly of PRJNA753725 data set (Changes of intestinal resistance genome induced by diet).

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