ID 904204 - BioProject

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Accession: PRJEB57738 ID: 904204

EMG produced TPA metagenomics assembly of PRJNA755346 data set (Intestinal Virome Diversity Correlates with Intestinal Microbiome Diversity in ob and Apoe mice).

The Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set PRJNA755346, and was assembled with metaSPAdes v3. More...

Accession	PRJEB57738
Data Type	Genome sequencing and assembly
Scope	Monoisolate
Keyword	TPA:assembly
Publications	Mitchell AL et al., "EBI Metagenomics in 2017: enriching the analysis of microbial communities, from sequence reads to assemblies.", Nucleic Acids Res, 2018 Jan 4;46(D1):D726-D735
Submission	Registration date: 22-Nov-2022 EMG

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	2023
WGS master	208
Publications
PubMed	1
PMC	1
Other datasets
BioSample	208
Assembly	208

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

208
208

Assembly	WGS	BioSample	Taxonomy
GCA_947644765.1	CANSAR000000000	SAMEA112246814	Acutalibacter muris
GCA_947649385.1	CANSRS000000000	SAMEA112246929	Acutalibacter muris
GCA_947648445.1	CANSNQ000000000	SAMEA112246930	Acutalibacter muris
GCA_947651095.1	CANSXX000000000	SAMEA112246964	Aerococcus urinaeequi
GCA_947648245.1	CANSMU000000000	SAMEA112246969	Akkermansia muciniphila
GCA_947651735.1	CANTAI000000000	SAMEA112246781	Bifidobacterium pseudolongum
GCA_947649835.1	CANSTI000000000	SAMEA112246963	Corynebacterium stationis
GCA_947648375.1	CANSNN000000000	SAMEA112246948	Enterococcus faecalis
GCA_947647185.1	CANSJK000000000	SAMEA112246931	Escherichia coli
GCA_947645475.1	CANSCV000000000	SAMEA112246787	Lactobacillus johnsonii
GCA_947650235.1	CANSUT000000000	SAMEA112246786	Muribaculum intestinale
GCA_947648595.1	CANSOV000000000	SAMEA112246885	Parvibacter caecicola
GCA_947645085.1	CANSBQ000000000	SAMEA112246917	Psychrobacter pasteurii
GCA_947653185.1	CANTGB000000000	SAMEA112246910	Thomasclavelia cocleata
GCA_947646475.1	CANSGS000000000	SAMEA112246971	Vagococcus fluvialis
GCA_948437675.1	CAOJJX000000000	SAMEA112246875	uncultured Alistipes sp.
GCA_947651205.1	CANSYA000000000	SAMEA112246961	uncultured Alistipes sp.
GCA_947646435.1	CANSGK000000000	SAMEA112246983	uncultured Alistipes sp.
GCA_947648275.1	CANSMZ000000000	SAMEA112246960	uncultured Alistipes sp.
GCA_947648265.1	CANSNB000000000	SAMEA112246959	uncultured Alistipes sp.
GCA_947649395.1	CANSRK000000000	SAMEA112246810	uncultured Alistipes sp.
GCA_947643525.1	CANRWH000000000	SAMEA112246886	uncultured Anaerotruncus sp.
GCA_948472915.1	CAOKVQ000000000	SAMEA112246946	uncultured Angelakisella sp.
GCA_947644525.1	CANRZT000000000	SAMEA112246897	uncultured Asinibacterium sp.
GCA_947644565.1	CANSAA000000000	SAMEA112246870	uncultured Asinibacterium sp.
GCA_948438505.1	CAOJKY000000000	SAMEA112246854	uncultured Bacillales bacterium
GCA_947653105.1	CANTFT000000000	SAMEA112246905	uncultured Bacillales bacterium
GCA_947648645.1	CANSOG000000000	SAMEA112246908	uncultured Bacteroidales bacterium
GCA_947647625.1	CANSLA000000000	SAMEA112246794	uncultured Bacteroidales bacterium
GCA_947644715.1	CANSAP000000000	SAMEA112246828	uncultured Bacteroidales bacterium
GCA_947648665.1	CANSOQ000000000	SAMEA112246892	uncultured Candidatus Melainabacteria bacterium
GCA_947644755.1	CANSAN000000000	SAMEA112246841	uncultured Candidatus Saccharibacteria bacterium
GCA_948472515.1	CAOKUC000000000	SAMEA112246887	uncultured Clostridia bacterium
GCA_947653095.1	CANTFZ000000000	SAMEA112246937	uncultured Clostridia bacterium
GCA_947653015.1	CANTFO000000000	SAMEA112246877	uncultured Clostridia bacterium
GCA_947653335.1	CANTHC000000000	SAMEA112246888	uncultured Clostridia bacterium
GCA_947644665.1	CANSAG000000000	SAMEA112246838	uncultured Clostridia bacterium
GCA_947650245.1	CANSUU000000000	SAMEA112246791	uncultured Clostridia bacterium
GCA_947648285.1	CANSNE000000000	SAMEA112246975	uncultured Clostridia bacterium
GCA_947648575.1	CANSOT000000000	SAMEA112246895	uncultured Clostridia bacterium
GCA_947650025.1	CANSTW000000000	SAMEA112246804	uncultured Clostridia bacterium
GCA_947649285.1	CANSRB000000000	SAMEA112246904	uncultured Clostridia bacterium
GCA_947647585.1	CANSKY000000000	SAMEA112246803	uncultured Clostridia bacterium
GCA_947646685.1	CANSHO000000000	SAMEA112246797	uncultured Clostridia bacterium
GCA_947650195.1	CANSUO000000000	SAMEA112246801	uncultured Clostridia bacterium
GCA_947648655.1	CANSOR000000000	SAMEA112246906	uncultured Clostridia bacterium
GCA_947649975.1	CANSTO000000000	SAMEA112246855	uncultured Clostridia bacterium
GCA_947644575.1	CANRZX000000000	SAMEA112246863	uncultured Clostridia bacterium
GCA_947644915.1	CANSBD000000000	SAMEA112246806	uncultured Clostridia bacterium
GCA_947651465.1	CANSZI000000000	SAMEA112246819	uncultured Clostridia bacterium
GCA_947652455.1	CANTDH000000000	SAMEA112246926	uncultured Clostridia bacterium
GCA_947649375.1	CANSRI000000000	SAMEA112246834	uncultured Clostridia bacterium
GCA_947642715.1	CANRTP000000000	SAMEA112246939	uncultured Clostridia bacterium
GCA_947648415.1	CANSNS000000000	SAMEA112246947	uncultured Clostridia bacterium
GCA_947650785.1	CANSWP000000000	SAMEA112246790	uncultured Clostridia bacterium
GCA_947642565.1	CANRSZ000000000	SAMEA112246953	uncultured Clostridia bacterium
GCA_947644745.1	CANSAL000000000	SAMEA112246829	uncultured Clostridia bacterium
GCA_947651585.1	CANSZV000000000	SAMEA112246779	uncultured Clostridia bacterium
GCA_947650325.1	CANSUY000000000	SAMEA112246785	uncultured Clostridia bacterium
GCA_947650725.1	CANSWK000000000	SAMEA112246820	uncultured Clostridia bacterium
GCA_947645015.1	CANSBN000000000	SAMEA112246928	uncultured Clostridia bacterium
GCA_947646495.1	CANSGT000000000	SAMEA112246982	uncultured Clostridia bacterium
GCA_947653025.1	CANTFN000000000	SAMEA112246852	uncultured Clostridium sp.
GCA_947653285.1	CANTGO000000000	SAMEA112246901	uncultured Clostridium sp.
GCA_947653235.1	CANTGH000000000	SAMEA112246893	uncultured Clostridium sp.
GCA_947644175.1	CANRYY000000000	SAMEA112246846	uncultured Clostridium sp.
GCA_947648215.1	CANSMW000000000	SAMEA112246970	uncultured Clostridium sp.
GCA_947650765.1	CANSWO000000000	SAMEA112246792	uncultured Clostridium sp.
GCA_947646885.1	CANSIA000000000	SAMEA112246850	uncultured Clostridium sp.
GCA_947650745.1	CANSWM000000000	SAMEA112246842	uncultured Clostridium sp.
GCA_947651145.1	CANSYC000000000	SAMEA112246832	uncultured Clostridium sp.
GCA_947648255.1	CANSNA000000000	SAMEA112246978	uncultured Clostridium sp.
GCA_947649915.1	CANSTM000000000	SAMEA112246860	uncultured Clostridium sp.
GCA_947647595.1	CANSKZ000000000	SAMEA112246837	uncultured Clostridium sp.
GCA_947646515.1	CANSGV000000000	SAMEA112246958	uncultured Clostridium sp.
GCA_947649345.1	CANSRF000000000	SAMEA112246924	uncultured Clostridium sp.
GCA_947648495.1	CANSOA000000000	SAMEA112246919	uncultured Clostridium sp.
GCA_947647575.1	CANSKW000000000	SAMEA112246826	uncultured Clostridium sp.
GCA_947652565.1	CANTDO000000000	SAMEA112246916	uncultured Clostridium sp.
GCA_947648005.1	CANSMH000000000	SAMEA112246879	uncultured Clostridium sp.
GCA_947644685.1	CANSAO000000000	SAMEA112246816	uncultured Clostridium sp.
GCA_947646555.1	CANSGX000000000	SAMEA112246909	uncultured Clostridium sp.
GCA_947644705.1	CANSAK000000000	SAMEA112246835	uncultured Coriobacteriaceae bacterium
GCA_947649415.1	CANSRM000000000	SAMEA112246823	uncultured Desulfovibrio sp.
GCA_947649665.1	CANSSM000000000	SAMEA112246782	uncultured Desulfovibrio sp.
GCA_947653115.1	CANTFS000000000	SAMEA112246848	uncultured Dorea sp.
GCA_947650135.1	CANSUK000000000	SAMEA112246957	uncultured Dorea sp.
GCA_947648185.1	CANSMV000000000	SAMEA112246984	uncultured Eggerthellaceae bacterium
GCA_947646725.1	CANSHT000000000	SAMEA112246795	uncultured Eggerthellaceae bacterium
GCA_947653455.1	CANTGY000000000	SAMEA112246807	uncultured Eggerthellaceae bacterium
GCA_947653145.1	CANTFV000000000	SAMEA112246847	uncultured Eggerthellaceae bacterium
GCA_947653035.1	CANTFP000000000	SAMEA112246871	uncultured Enterorhabdus sp.
GCA_948434335.1	CAOJEV000000000	SAMEA112246868	uncultured Enterorhabdus sp.
GCA_947644585.1	CANRZZ000000000	SAMEA112246874	uncultured Enterorhabdus sp.
GCA_947648515.1	CANSOE000000000	SAMEA112246902	uncultured Erysipelotrichaceae bacterium
GCA_947649125.1	CANSQL000000000	SAMEA112246922	uncultured Erysipelotrichaceae bacterium
GCA_948471275.1	CAOKSC000000000	SAMEA112246805	uncultured Firmicutes bacterium
GCA_947644695.1	CANSAJ000000000	SAMEA112246849	uncultured Firmicutes bacterium
GCA_947650875.1	CANSXE000000000	SAMEA112246793	uncultured Firmicutes bacterium
GCA_947650795.1	CANSWR000000000	SAMEA112246974	uncultured Firmicutes bacterium
GCA_947643115.1	CANRVE000000000	SAMEA112246777	uncultured Firmicutes bacterium
GCA_947647565.1	CANSKX000000000	SAMEA112246798	uncultured Firmicutes bacterium
GCA_947644395.1	CANRZF000000000	SAMEA112246903	uncultured Flavonifractor sp.
GCA_947648225.1	CANSMY000000000	SAMEA112246965	uncultured Flavonifractor sp.
GCA_947653175.1	CANTGQ000000000	SAMEA112246867	uncultured Hungatella sp.
GCA_948473285.1	CAOKXA000000000	SAMEA112246949	uncultured Hungatella sp.
GCA_948442495.1	CAOJSE000000000	SAMEA112246861	uncultured Hungatella sp.
GCA_947646615.1	CANSHJ000000000	SAMEA112246914	uncultured Hungatella sp.
GCA_947649455.1	CANSRT000000000	SAMEA112246920	uncultured Hungatella sp.
GCA_947649335.1	CANSRR000000000	SAMEA112246876	uncultured Hungatella sp.
GCA_947645175.1	CANSBX000000000	SAMEA112246918	uncultured Hungatella sp.
GCA_947653495.1	CANTHK000000000	SAMEA112246799	uncultured Lachnoclostridium sp.
GCA_947644605.1	CANSAC000000000	SAMEA112246857	uncultured Lachnospiraceae bacterium
GCA_947646565.1	CANSHG000000000	SAMEA112246802	uncultured Lachnospiraceae bacterium
GCA_947649265.1	CANSRA000000000	SAMEA112246898	uncultured Lachnospiraceae bacterium
GCA_947644545.1	CANRZW000000000	SAMEA112246873	uncultured Lachnospiraceae bacterium
GCA_947649245.1	CANSQV000000000	SAMEA112246923	uncultured Lachnospiraceae bacterium
GCA_947649995.1	CANSTV000000000	SAMEA112246833	uncultured Lachnospiraceae bacterium
GCA_947650005.1	CANSTU000000000	SAMEA112246818	uncultured Lachnospiraceae bacterium
GCA_947642545.1	CANRTA000000000	SAMEA112246956	uncultured Lachnospiraceae bacterium
GCA_947650035.1	CANSTX000000000	SAMEA112246824	uncultured Lachnospiraceae bacterium
GCA_947643465.1	CANRWE000000000	SAMEA112246891	uncultured Lachnospiraceae bacterium
GCA_947645585.1	CANSDJ000000000	SAMEA112246780	uncultured Lachnospiraceae bacterium
GCA_947648435.1	CANSNU000000000	SAMEA112246950	uncultured Lachnospiraceae bacterium
GCA_947653155.1	CANTGE000000000	SAMEA112246858	uncultured Lachnospiraceae bacterium
GCA_947653075.1	CANTFY000000000	SAMEA112246896	uncultured Lachnospiraceae bacterium
GCA_947653195.1	CANTGI000000000	SAMEA112246943	uncultured Lachnospiraceae bacterium
GCA_947653255.1	CANTGL000000000	SAMEA112246815	uncultured Lachnospiraceae bacterium
GCA_947653135.1	CANTGA000000000	SAMEA112246934	uncultured Lachnospiraceae bacterium
GCA_947650015.1	CANSUA000000000	SAMEA112246935	uncultured Lactobacillus sp.
GCA_947647975.1	CANSME000000000	SAMEA112246872	uncultured Lactobacillus sp.
GCA_947653055.1	CANTFR000000000	SAMEA112246865	uncultured Mesorhizobium sp.
GCA_947646745.1	CANSHK000000000	SAMEA112246915	uncultured Methylovirgula sp.
GCA_947647645.1	CANSLE000000000	SAMEA112246843	uncultured Microbacterium sp.
GCA_947652375.1	CANTCS000000000	SAMEA112246967	uncultured Mollicutes bacterium
GCA_947650055.1	CANSUB000000000	SAMEA112246821	uncultured Mucispirillum sp.
GCA_947651705.1	CANTAH000000000	SAMEA112246784	uncultured Muribaculaceae bacterium
GCA_947644725.1	CANSAM000000000	SAMEA112246822	uncultured Muribaculaceae bacterium
GCA_947646445.1	CANSGP000000000	SAMEA112246968	uncultured Muribaculaceae bacterium
GCA_947645385.1	CANSCT000000000	SAMEA112246882	uncultured Muribaculaceae bacterium
GCA_947649605.1	CANSSH000000000	SAMEA112246938	uncultured Muribaculaceae bacterium
GCA_947653215.1	CANTGD000000000	SAMEA112246944	uncultured Muribaculaceae bacterium
GCA_947653085.1	CANTFU000000000	SAMEA112246862	uncultured Mycobacterium sp.
GCA_947653365.1	CANTGW000000000	SAMEA112246808	uncultured Mycoplasma sp.
GCA_947648205.1	CANSNC000000000	SAMEA112246962	uncultured Mycoplasma sp.
GCA_947642635.1	CANRTI000000000	SAMEA112246945	uncultured Mycoplasma sp.
GCA_947653475.1	CANTHG000000000	SAMEA112246800	uncultured Mycoplasmatota bacterium
GCA_948433145.1	CAOJDR000000000	SAMEA112246900	uncultured Mycoplasmatota bacterium
GCA_947649365.1	CANSRH000000000	SAMEA112246881	uncultured Mycoplasmatota bacterium
GCA_947649355.1	CANSRG000000000	SAMEA112246866	uncultured Mycoplasmatota bacterium
GCA_947645535.1	CANSDD000000000	SAMEA112246789	uncultured Mycoplasmatota bacterium
GCA_947647525.1	CANSKV000000000	SAMEA112246788	uncultured Mycoplasmatota bacterium
GCA_947652325.1	CANTCQ000000000	SAMEA112246830	uncultured Mycoplasmatota bacterium
GCA_947650775.1	CANSWQ000000000	SAMEA112246840	uncultured Mycoplasmatota bacterium
GCA_947648505.1	CANSOB000000000	SAMEA112246913	uncultured Mycoplasmatota bacterium
GCA_947647615.1	CANSKS000000000	SAMEA112246839	uncultured Neglectibacter sp.
GCA_947653165.1	CANTGC000000000	SAMEA112246883	uncultured Odoribacter sp.
GCA_947650065.1	CANSTZ000000000	SAMEA112246844	uncultured Odoribacter sp.
GCA_947642605.1	CANRTF000000000	SAMEA112246936	uncultured Parabacteroides sp.
GCA_947651215.1	CANSYI000000000	SAMEA112246973	uncultured Parvibacter sp.
GCA_947653065.1	CANTFX000000000	SAMEA112246880	uncultured Peptococcaceae bacterium
GCA_947653125.1	CANTFW000000000	SAMEA112246813	uncultured Porphyromonadaceae bacterium
GCA_948442175.1	CAOJRO000000000	SAMEA112246932	uncultured Porphyromonadaceae bacterium
GCA_947646455.1	CANSGR000000000	SAMEA112246976	uncultured Porphyromonadaceae bacterium
GCA_947643165.1	CANRVB000000000	SAMEA112246778	uncultured Porphyromonadaceae bacterium
GCA_947647495.1	CANSKQ000000000	SAMEA112246809	uncultured Porphyromonadaceae bacterium
GCA_947648545.1	CANSOI000000000	SAMEA112246890	uncultured Porphyromonadaceae bacterium
GCA_947648425.1	CANSNT000000000	SAMEA112246933	uncultured Porphyromonadaceae bacterium
GCA_947644635.1	CANSAB000000000	SAMEA112246859	uncultured Porphyromonadaceae bacterium
GCA_947648535.1	CANSOF000000000	SAMEA112246925	uncultured Porphyromonadaceae bacterium
GCA_947650455.1	CANSVF000000000	SAMEA112246972	uncultured Porphyromonadaceae bacterium
GCA_947647535.1	CANSKR000000000	SAMEA112246812	uncultured Porphyromonadaceae bacterium
GCA_947647635.1	CANSLC000000000	SAMEA112246831	uncultured Porphyromonadaceae bacterium
GCA_947651685.1	CANTAE000000000	SAMEA112246927	uncultured Porphyromonadaceae bacterium
GCA_947650545.1	CANSVY000000000	SAMEA112246827	uncultured Porphyromonadaceae bacterium
GCA_947649195.1	CANSQQ000000000	SAMEA112246899	uncultured Porphyromonadaceae bacterium
GCA_947648475.1	CANSNX000000000	SAMEA112246942	uncultured Porphyromonadaceae bacterium
GCA_947644845.1	CANSAZ000000000	SAMEA112246811	uncultured Porphyromonadaceae bacterium
GCA_947649495.1	CANSRU000000000	SAMEA112246884	uncultured Porphyromonadaceae bacterium
GCA_948472475.1	CAOKUF000000000	SAMEA112246878	uncultured Prevotella sp.
GCA_947646905.1	CANSIF000000000	SAMEA112246853	uncultured Pseudoflavonifractor sp.
GCA_947644625.1	CANRZY000000000	SAMEA112246864	uncultured Pseudoflavonifractor sp.
GCA_947646625.1	CANSHL000000000	SAMEA112246856	uncultured Ralstonia sp.
GCA_948432835.1	CAOJDC000000000	SAMEA112246940	uncultured Rikenellaceae bacterium
GCA_947650275.1	CANSUX000000000	SAMEA112246951	uncultured Roseburia sp.
GCA_947642555.1	CANRSX000000000	SAMEA112246955	uncultured Roseburia sp.
GCA_947647505.1	CANSKO000000000	SAMEA112246817	uncultured Roseburia sp.
GCA_947644675.1	CANSAI000000000	SAMEA112246845	uncultured Roseburia sp.
GCA_948442735.1	CAOJSM000000000	SAMEA112246851	uncultured bacterium
GCA_947653045.1	CANTFQ000000000	SAMEA112246894	uncultured bacterium
GCA_947650665.1	CANSWE000000000	SAMEA112246836	uncultured bacterium
GCA_947650125.1	CANSUH000000000	SAMEA112246981	uncultured bacterium
GCA_947651445.1	CANSZG000000000	SAMEA112246912	uncultured bacterium
GCA_947651245.1	CANSYM000000000	SAMEA112246979	uncultured bacterium
GCA_947650165.1	CANSUL000000000	SAMEA112246977	uncultured bacterium
GCA_947642755.1	CANRTR000000000	SAMEA112246941	uncultured bacterium
GCA_947646655.1	CANSHI000000000	SAMEA112246907	uncultured bacterium
GCA_947650995.1	CANSXM000000000	SAMEA112246966	uncultured bacterium
GCA_947648625.1	CANSOM000000000	SAMEA112246911	uncultured bacterium
GCA_947649525.1	CANSSC000000000	SAMEA112246952	uncultured bacterium
GCA_947649735.1	CANSST000000000	SAMEA112246783	uncultured bacterium
GCA_947650815.1	CANSWU000000000	SAMEA112246980	uncultured bacterium
GCA_947648025.1	CANSMJ000000000	SAMEA112246869	uncultured bacterium
GCA_947648925.1	CANSPR000000000	SAMEA112246889	uncultured bacterium
GCA_947651435.1	CANSZF000000000	SAMEA112246954	uncultured bacterium
GCA_947645165.1	CANSBW000000000	SAMEA112246921	uncultured bacterium
GCA_947645445.1	CANSCX000000000	SAMEA112246796	uncultured bacterium
GCA_947651455.1	CANSZC000000000	SAMEA112246825	uncultured bacterium

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EMG produced TPA metagenomics assembly of PRJNA755346 data set (Intestinal Virome Diversity Correlates with Intestinal Microbiome Diversity in ob and Apoe mice).

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