ID 861640 - BioProject

Display Settings:

Format

Summary
BioProject ID list
Accessions List

Send to:

Choose Destination

File
Clipboard
Collections
My Bibliography

Links from Nucleotide

Accession: PRJEB54918 ID: 861640

EMG produced TPA metagenomics assembly of PRJNA385855 data set (Temporal sampling of marine metagenomes from Station ALOHA and BATS).

The Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set PRJNA385855, and was assembled with metaSPAdes v3. More...

Accession	PRJEB54918
Scope	Monoisolate
Keyword	TPA:assembly
Publications	Mitchell AL et al., "EBI Metagenomics in 2017: enriching the analysis of microbial communities, from sequence reads to assemblies.", Nucleic Acids Res, 2018 Jan 4;46(D1):D726-D735
Submission	Registration date: 23-Jul-2022 EMG

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	1166
WGS master	56
Publications
PubMed	1
PMC	1
Other datasets
BioSample	56
Assembly	56

Assembly details:

Download

Assembly level

Number of Assemblies

Contig

Total

56
56

Assembly	WGS	BioSample	Taxonomy
GCA_963935155.1	CAWWDB000000000	SAMEA115179721	Alteromonas macleodii
GCA_963935085.1	CAWWCI000000000	SAMEA115179672	uncultured Acidimicrobiaceae bacterium
GCA_963935105.1	CAWWBT000000000	SAMEA115179697	uncultured Acidimicrobiales bacterium
GCA_963935415.1	CAWWBQ000000000	SAMEA115179708	uncultured Alphaproteobacteria bacterium
GCA_963935045.1	CAWWCD000000000	SAMEA115179716	uncultured Alphaproteobacteria bacterium
GCA_963935525.1	CAWWCH000000000	SAMEA115179693	uncultured Anaerolineales bacterium
GCA_963935395.1	CAWWBK000000000	SAMEA115179679	uncultured Candidatus Actinomarinales bacterium
GCA_963935545.1	CAWWBL000000000	SAMEA115179702	uncultured Candidatus Actinomarinales bacterium
GCA_963935295.1	CAWWBG000000000	SAMEA115179714	uncultured Candidatus Nitrosopelagicus sp.
GCA_963935275.1	CAWWDE000000000	SAMEA115179675	uncultured Candidatus Obscuribacterales bacterium
GCA_963935145.1	CAWWCQ000000000	SAMEA115179711	uncultured Candidatus Poseidoniales archaeon
GCA_963935165.1	CAWWCB000000000	SAMEA115179684	uncultured Candidatus Poseidoniales archaeon
GCA_963935175.1	CAWWBW000000000	SAMEA115179678	uncultured Candidatus Poseidoniales archaeon
GCA_963935305.1	CAWWBM000000000	SAMEA115179695	uncultured Candidatus Poseidoniales archaeon
GCA_963935435.1	CAWWBY000000000	SAMEA115179687	uncultured Candidatus Poseidoniales archaeon
GCA_963935095.1	CAWWBU000000000	SAMEA115179698	uncultured Candidatus Poseidoniales archaeon
GCA_963935535.1	CAWWBZ000000000	SAMEA115179720	uncultured Candidatus Poseidoniales archaeon
GCA_963935465.1	CAWWCA000000000	SAMEA115179686	uncultured Candidatus Poseidoniales archaeon
GCA_963935565.1	CAWWCU000000000	SAMEA115179670	uncultured Candidatus Poseidoniales archaeon
GCA_963935335.1	CAWWCN000000000	SAMEA115179691	uncultured Candidatus Poseidoniales archaeon
GCA_963935125.1	CAWWBV000000000	SAMEA115179673	uncultured Candidatus Poseidoniales archaeon
GCA_963935255.1	CAWWBP000000000	SAMEA115179705	uncultured Candidatus Poseidoniales archaeon
GCA_963935075.1	CAWWBJ000000000	SAMEA115179689	uncultured Candidatus Poseidoniales archaeon
GCA_963935515.1	CAWWCR000000000	SAMEA115179667	uncultured Candidatus Poseidoniales archaeon
GCA_963935115.1	CAWWBN000000000	SAMEA115179696	uncultured Cellvibrionales bacterium
GCA_963935405.1	CAWWBS000000000	SAMEA115179706	uncultured Dehalococcoidia bacterium
GCA_963935205.1	CAWWBI000000000	SAMEA115179682	uncultured Flavobacteriaceae bacterium
GCA_963935485.1	CAWWBD000000000	SAMEA115179703	uncultured Gammaproteobacteria bacterium
GCA_963935245.1	CAWWBB000000000	SAMEA115179717	uncultured Gammaproteobacteria bacterium
GCA_963935575.1	CAWWCY000000000	SAMEA115179715	uncultured Gammaproteobacteria bacterium
GCA_963935225.1	CAWWBC000000000	SAMEA115179676	uncultured Gammaproteobacteria bacterium
GCA_963935265.1	CAWWCL000000000	SAMEA115179680	uncultured Microthrixaceae bacterium
GCA_963935355.1	CAWWBH000000000	SAMEA115179712	uncultured Nitrososphaerales archaeon
GCA_963935505.1	CAWWCT000000000	SAMEA115179701	uncultured Opitutales bacterium
GCA_963935315.1	CAWWCC000000000	SAMEA115179669	uncultured Planctomycetaceae bacterium
GCA_963935365.1	CAWWDC000000000	SAMEA115179677	uncultured Planctomycetaceae bacterium
GCA_963935185.1	CAWWDD000000000	SAMEA115179671	uncultured Planctomycetaceae bacterium
GCA_963935345.1	CAWWCF000000000	SAMEA115179710	uncultured Prochlorococcus sp.
GCA_963935425.1	CAWWCM000000000	SAMEA115179683	uncultured Pseudomonadales bacterium
GCA_963935455.1	CAWWBO000000000	SAMEA115179704	uncultured Puniceicoccaceae bacterium
GCA_963935445.1	CAWWCX000000000	SAMEA115179719	uncultured Roseibacillus sp.
GCA_963935025.1	CAWWBX000000000	SAMEA115179681	uncultured Synechococcus sp.
GCA_963935235.1	CAWWCS000000000	SAMEA115179690	uncultured bacterium
GCA_963935475.1	CAWWCO000000000	SAMEA115179694	uncultured bacterium
GCA_963935495.1	CAWWDA000000000	SAMEA115179700	uncultured bacterium
GCA_963935215.1	CAWWBR000000000	SAMEA115179674	uncultured bacterium
GCA_963935555.1	CAWWCP000000000	SAMEA115179713	uncultured bacterium
GCA_963935385.1	CAWWCZ000000000	SAMEA115179699	uncultured bacterium
GCA_963935035.1	CAWWBF000000000	SAMEA115179692	uncultured bacterium
GCA_963935285.1	CAWWCV000000000	SAMEA115179666	uncultured bacterium
GCA_963935195.1	CAWWCK000000000	SAMEA115179707	uncultured euryarchaeote
GCA_963935065.1	CAWWCJ000000000	SAMEA115179718	uncultured euryarchaeote
GCA_963935055.1	CAWWCG000000000	SAMEA115179688	uncultured euryarchaeote
GCA_963935325.1	CAWWCW000000000	SAMEA115179668	uncultured euryarchaeote
GCA_963935135.1	CAWWBE000000000	SAMEA115179685	uncultured euryarchaeote
GCA_963935375.1	CAWWCE000000000	SAMEA115179709	uncultured euryarchaeote

BioProject

Result Filters

Display Settings:

Send to:

Links from Nucleotide

EMG produced TPA metagenomics assembly of PRJNA385855 data set (Temporal sampling of marine metagenomes from Station ALOHA and BATS).

Supplemental Content

Related information

Recent activity