TEAM1968 (WT) hybrid genome assembly

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Result Filters

Organism: Pseudomonas putida
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas putida group

Attributes

strain	KT2440
collection date	2022-08
broad-scale environmental context	lab
local-scale environmental context	glass culture tube shaken and grown at 30 C
environmental medium	LB culture media
geographic location	USA: California
isolation and growth condition	PMID: 33964456
latitude and longitude	37.8395 N 122.2892 W
number of replicons	1
reference for biomaterial	PMID: 12534463
observed biotic relationship	free living
collection method	laboratory culture
encoded traits	cmrR; prototroph LB media
estimated size	6,191,241 bp
extrachromosomal elements	0
negative control type	sterile culture tube filled with culture media
relationship to oxygen	obligate aerobe
sample size	1.5 g DNA
sample volume or weight for DNA extraction	5 mL culture grown in LB media
Sequencing Data Type	Hybrid genome assembly