[Table, BLAST Substitution Matrices]. - BLAST® Command Line Applications User Manual - NCBI Bookshelf

Warning: The NCBI web site requires JavaScript to function. more...

Query Length	Substitution Matrix	Gap Costs
<35	PAM-30	(9, 1)
35-50	PAM-70	(10, 1)
50-85	BLOSUM-80	(10, 1)
>85	BLOSUM-62	(11, 1)

From: Appendices

Cover of BLAST® Command Line Applications User Manual

BLAST^® Command Line Applications User Manual [Internet].

Bethesda (MD): National Center for Biotechnology Information (US); 2008-.

Copyright Notice

BLAST is a Registered Trademark of the National Library of Medicine

NCBI Bookshelf. A service of the National Library of Medicine, National Institutes of Health.