1WHG,2CP6,1WHJ,2HKN,2CP5,2COZ,1WHH,1TOV,1WHK,2COW,1IXD,1WHL,1WHM


Conserved Protein Domain Family
CAP_GLY

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smart01052: CAP_GLY 
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Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and transportation of vesicles and organelles along the cytoskeletal network.
A conserved motif, CAP-Gly, has been identified in a number of CAPs, including CLIP-170 and dynactins. The crystal structure of Caenorhabditis elegans F53F4.3 protein CAP-Gly domain was recently solved. The domain contains three beta-strands. The most conserved sequence, GKNDG, is located in two consecutive sharp turns on the surface, forming the entrance to a groove.
Statistics
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PSSM-Id: 214997
Aligned: 140 rows
Threshold Bit Score: 48.3504
Created: 12-Jul-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1WHG_A        35 VGSRCEVRAPDhslRRGTVMYVGLTDFKPGYWVGVRYDEPl----GKNDGSVNGKRYFEC-Q--AKYGAFVKPSAVT 104 house mouse
XP_958484    120 IGDMVEV-PGN---MTGTVRFIGSVDGRKGIFAGVELHREfa-srGKNSGDVDGVSYFNT-Sl-PGSGIFLPLSKav 189 Neurospora crassa ...
XP_457732      5 VGTKVSIPGTR---GQGILRYYGPINGKNGIFGGIELIGPiaaarGKNSGSVNGVQYFEVqQ--PMTGLFLPFERLK 76  Debaryomyces hanse...
NP_986250      9 IGTFLQI-PNV---GKGQLKYIGPVEGKQGLFVGVDLL-An---iGKNDGTFRGKRYFET-Ey-PQSGLFIHLQKVa 75  Ashbya gossypii AT...
XP_445011      8 IGCYIQI-PNL---GRGQLKYVGPVESKPGVFAGVDLL-An---iGKNDGSFQGRRYFQA-Ey-SQSGLFIQLQKIE 74  Candida glabrata C...
XP_452261      7 IGLVIEV-PNI---GRGQIRYIGSVETKKGTFVGINLF-Ag---nGKNDGTFRGRRYFET-Sf-PQSGLFIQWEKIa 73  Kluyveromyces lact...
NP_001022683  21 IGRLVDV-VNV---GKGFLRYVGPIHGKdGMFCGIELLEPn----GKHDGTFQGVSYFIA-T--PYHGIFAPIFRVT 86  nematode
NP_593613      4 LGSVVEV-ITG---ERGFVRYAGEVENRkGVYVGLELLPEfa-efGKNRGVVDGREYFKT-KnnEKTGIFVPFDKCK 74  Schizosaccharomyce...
EDP48841       9 VGDVVNV-PGG---MYGTVRYLGSVAGKqGRFAGIELAPEha-krGKNNGDVEGRKYFKT-Tv-PGSGIFVPMNNNR 78  Aspergillus fumiga...
XP_501179      6 VGDQVTL-PEG---QQGMVRFVGRVDNKpGEFAGIELLKGwe-shGRHSGVYGGVSYFRT-Et-PNTGLFISYPKLV 75  Yarrowia lipolytic...
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