Conserved Protein Domain Family
autotrans_barl

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TIGR01414: autotrans_barl 
outer membrane autotransporter barrel domain
A number of Gram-negative bacterial proteins, mostly found in pathogens and associated with virulence, contain a conserved C-terminal domain that integrates into the outer membrane and enables the N-terminal region to be delivered across the membrane. This C-terminal autotransporter domain is about 400 amino acids in length and includes the aromatic amino acid-rich OMP signal, typically ending with a Phe or Trp residue, at the extreme C-terminus. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis]
Statistics
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PSSM-Id: 273608
Aligned: 25 rows
Threshold Bit Score: 200.303
Created: 8-Oct-2014
Updated: 2-Oct-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
AAC36865      995 GQNSFNGSGLYG------NIYSDrvIVYQTQEQ-----HFCDRISPNPRQWKSYGVRYHGGGTER----------AgNVA 1053 Helicobacter ...
AAD41751      528 PAFQAVSLALGSl-----SGSGT--FQMNTDIAs----HTGDMLNVAGNASGNFVLDIKNTGLEPv---------SaGAP 587  Escherichia c...
CAC14222      220 AGGQFNRLEIENl-----SGQGN--FAMTTQLAs----NTGDFITVSQQATGQFGITVQDSGKEP----------QsADN 278  Yersinia pestis
CAC14220     1032 SNAKNAQLTMASl-----NGTGN--FNLGSVMQs----DSVAPLNVSGDANGDFIIAMNSSGQAP-------------TN 1087 Yersinia pestis
AAC44731      897 GGKDFATLRVKEl----nANNAT--FLMHTNTS------QADQLNVTNKLLGSNNTVLVDFLNKP----------AsEMN 954  Escherichia coli
Q52657       1543 SGSTLDLSGVSNla--lvVTATN--FDMNNISPdtkytVISAETAGGLKPTPKENVKITINNDNRfv-------dFtFDA 1611 Rickettsia co...
BAA11383      557 PGNSIGTLNVAGd----vSFEPG--SRYAVEVGp---nGQSDRIQSGGAATIGGGEVAVTLENSSnlltqsevrsLlGQQ 627  Serratia marc...
ENF96680       57 SAENFITLTTNTl-----SGNGN--FYMRTDMAn----HQSDQLNVTGQATGDFKIFVTDTGASPa---------A-GDS 115  Escherichia c...
WP_027868341   86 SNYGYGIVAMNSdghltiNGNGD--VDNGTELd----nSSVDNVV---AATGNYKVRIDNATGAGa--------iAdYKD 148  Escherichia coli
CAA34402      856 GGARFNGTLGSPnf--avTGSNR--FVNYSLIRaa-nqDYVITRTNNAENVVTNDIANSPFGGAPg---------VdQNV 921  Rickettsia ri...
AAC36865     1054 VATVKNEg----GQASVNFTTVG---------SVIGFDVFDAKLTAVKTnaygkvETNNANNAGNSTpaPGLGSIpglgg 1120 Helicobacter ...
AAD41751      588 LQVVQTG------GGDAAFTLKg---------GKVDAGTWEYGLSK---------ENTNWYLKADTP--PPVTPPtnpda 641  Escherichia c...
CAC14222      279 LALVHIN------RGDAQFRLLNt-------gGVVDLGVYQYGLYSQES------NGSTDWYLATST--EELPGtt---- 333  Yersinia pestis
CAC14220     1088 LNVVNTN------GGDARFALAN---------GPVALGNYMTNLAK---------DANGNFVLTADK--SAMTP------ 1135 Yersinia pestis
AAC44731      955 VTLITAPk----GSDEKTFTAGt---------QQIGFSNVTPVISTEKT------DDATKWMLTGYQtvSDAG------- 1008 Escherichia coli
Q52657       1612 STLTLFAediaaGVIDEDFAPGGpla----niPNAANIKKSLELMEDAPngsdarQAFNNFGLMTPLqeADATT------ 1681 Rickettsia co...
BAA11383      628 YTILSAQ-----QGVSGQFDAVApnylflgtgLSYQPTGVTLSVGRNGTsfasvaQTPNERAVAAAA--DALAAGnpvye 700  Serratia marc...
ENF96680      116 LTLVTT------GGGDAAFTLGNa-------gGVVDIGTYEYTLLDNG---------NHSWSLAENR--AQITPS----- 166  Escherichia c...
WP_027868341  149 KEIIYVNd----VNSNATFSAAN----------KADLGAYTYQAEQRGN-----------------------TVV----- 186  Escherichia coli
CAA34402      922 TTFVNATn----TAAYNNLLLAK---------NSANSANFVGAIVTDTS------AAITNVQLDLAKdiQAQLG------ 976  Rickettsia ri...
AAC36865     1121 tggtssgngtg------------gsqdqanaqdyttyfiSQAVANTSEANQLATATAlaSNYYLYLANIDSLNKRMGELR 1188 Helicobacter ...
AAD41751      642 dnpdagnpdagnpdagnpdagnpdagkpgtgkpdagtssSPVRRTTKSVDAVLGMAT--APAYVFNSELDNLRFRHGDVM 719  Escherichia c...
CAC14222      334 -------------------------------------pnVTAPMLSSAAQGVLNMAA--APRHILNAELSTLRQRQGELK 374  Yersinia pestis
CAC14220     1136 ----------------------------------------------GTAG-ILAVAN--TTPVIFNAELSSIQQRLDKQS 1166 Yersinia pestis
AAC44731     1009 ----------------------------------------------ASKTATDFMAS---GYKSFLTEVNNLNKRMGDLR 1039 Escherichia coli
Q52657       1682 ----------------------------------------HLMQDVVKPSDTIAAVNnqVVASNISSNITALNARMDKVQ 1721 Rickettsia co...
BAA11383      701 sllns-------------------------gtagearqaFRQLSGQIHADIASALVN--DSRYLREALNGRLRQAEGLAS 753  Serratia marc...
ENF96680      167 ---------------------------------------TTDV---------LNMAA--AQPLVFDAELDTVRERLGSVK 196  Escherichia c...
WP_027868341  187 ---------------------------------------LQQMELTDYANMALSIPS--ANTNIWNLEQDTVGTRLTNSR 225  Escherichia coli
CAA34402      977 ----------------------------------------------NRLGALRYLGTp-ETAEMAGPEAGAISAAVAAGD 1009 Rickettsia ri...
AAC36865     1189 SNPRSN------------GFWMRMFNGMQTTK---FALqTTSIYTTVQAGWDHVFG--SEGgNDFLGFAVAYAGAAMSSE 1251 Helicobacter ...
AAD41751      720 QNTRAPg-----------GVWGRYTGSDNRISggaSSG-YTLTQNGFETGADMVFDl-SDS-SLAVGTFFSYSDNSIKHA 785  Escherichia c...
CAC14222      375 ADAEGTv-----------GVWARYLTDDSRLSdnkNIA-FKNTLSGMEIGADKQLGl-NRG-NMLIGAFTSYSSSDVKST 440  Yersinia pestis
CAC14220     1167 TETNQS------------GMWGSYLNNNFAVKgraAN--FDQKLNGMTLGGDKATAl-ADG-VLSVGGFASYSSSDIKTD 1230 Yersinia pestis
AAC44731     1040 DTQGDA------------GVWARIMNG----Tg-sADGgYSDNYTHVQIGADR--KheLDGvDLFTGALLTYTDSNASSH 1100 Escherichia coli
Q52657       1722 AGNKGPvssgdedmdakfGAWISPFVGNATQKmcnSISgYKSDTTGGTIGFDGFVS----D-DLVLGLAYTRADTDIKLK 1796 Rickettsia co...
BAA11383      754 SSAIKAde---------dGAWAQLLGAWDHASgdaNATgYQASTYGVLVGLDSAAA----A-DWRLGVATGYTRTSLHGG 819  Serratia marc...
ENF96680      197 GVSYDTa------------MWSSAINTRNNVTtdaG-AgFEQTLTGLTLGIDSRFSr-EES-STIRGLIFGYSHSDIGFD 261  Escherichia c...
WP_027868341  226 HGLADNg-----------GAWVSYFGGNFNGDn--GTInYDQDVNGIMVGVDTKIDg-NNA-KWIVGAAAGFAKGDMNDR 290  Escherichia coli
CAA34402     1010 EAIDNVa----------yGIWAKPFYTDAHQSkkgGLAgYKAKTTGVVIGLDTLAN----D-NLMIGAAIGITKTDIKHQ 1074 Rickettsia ri...
AAC36865     1252 kkeqlvngaqkGVKSSGGNAFEISLYNSYVQDGaasstdfkyGFYSDSVAKFSFLWNKLTMFGEDS---S-PNMQNFGFT 1327 Helicobacter ...
AAD41751      786 -----------RGGKSNVDSSGGGLYATWFDND---------GYYVDGVLKYNRFNNELRTWMSDGtavK-GDYSQNGFG 844  Escherichia c...
CAC14222      441 -----------HDANGDIRSYGGGLYLTYLDQS---------GFYVDTVLKANRFNNKMNTQETR------GEYNQNALT 494  Yersinia pestis
CAC14220     1231 -----------YQSKGKVDSHSFGAYAQYLANS---------GYYMNAVVKNNQFSQDVNITSINGs-aS-GVSNFSGMG 1288 Yersinia pestis
AAC44731     1101 ------------AFSGKTKSVGGGLYASALFDS---------GAYFDLIGKYLHHDNQYTASFASLg--T-KDYSSHSWY 1156 Escherichia coli
Q52657       1797 nn--------kTGDKNKVESNIYSLYGLYSVPYenlf-veaiASYSDNKIRSKSRRVIATTLETVGyqtAnGKYKSESYT 1867 Rickettsia co...
BAA11383      820 -----------YGSKADSDNYHLAAYGDKQFGA---------LALRGGAGYTWHRIDTKRSVNYGMqsdR-DTAKYSART 878  Serratia marc...
ENF96680      262 -----------RGGKGNIDSYTLGAYAGWEHQN---------GAYVDGVVKVDRFANTIHGKMSNGataF-GDYNSNGAG 320  Escherichia c...
WP_027868341  291 s------------GQVDQDSQTAYIYSSAHFAN---------NVFVDGSLSYSHFNNDLSATMSNGtyvD-GSTNSDAWG 348  Escherichia coli
CAA34402     1075 dy--------kKGDKTDVNGFSFSLYGAQQLVKnffa--qgsAIFSLNQVKNKSQRYFFDANGNMSkqiAaGHYDNMTFG 1144 Rickettsia ri...
AAC36865     1328 FSQEIGYRFLLGNhnEWYITPQGQVALGYFNQSNIKQTLGSHWLKGEqs-sIFTVQGRIGSNFGyr-fNQFTEDKGWASE 1405 Helicobacter ...
AAD41751      845 GSLEAGRTFSLNEn-AW-AQPYVRTTAFRADKKEIRLNNGMKASIGA----TKSLQAEAGLKLG----MTLDVA-GKEVK 913  Escherichia c...
CAC14222      495 TSVESGYQWPVYAn-LV-LEPYGKVSYSRIGSADYTLSNGMVAEVAK----ADSVQGELGTVLA----ASYSIN-QMTIK 563  Yersinia pestis
CAC14220     1289 IALKAGKHFNFNE---AYVSPYVAMSAFSSGKSNISLSNGMEAQSSS----TRSAMGTLGVNAG----YRFVMNNGAELK 1357 Yersinia pestis
AAC44731     1157 AGAEVGYRYHLSe--ESWVEPQMELVYGSVSGKSFIWEDRGMALSMKdk-dYNPLIGRTGVDVG-------RTFSGDDWK 1226 Escherichia coli
Q52657       1868 GQLMAGYTYMMSe--NINLTPLAGLRYSTIKDKSYKETGTTYQNLTVkgknYNTFDGLLGAKVS----SN-INVNEIVLT 1940 Rickettsia co...
BAA11383      879 EQLFAEAGYSVKGe-WLNLEPFVNLAYVNFENNGIAESGGAAALRGDkq-hTDATVSTLGLRAD----TEWQVSPGTTVA 952  Serratia marc...
ENF96680      321 AHVESGFRWVDG---LWSVRPYLAFTGFTTDGQDYTLSNGMRADVGN----TRILRAEAGTAVS----YHMDLQNGTTLE 389  Escherichia c...
WP_027868341  349 FGLKAGYDFKLGDa-G-YVTPYGSVSGLFQSGDDYQLSNDMKVDGQS----YDSMRYELGVDAG----YTFTYSEDQALT 418  Escherichia coli
CAA34402     1145 GNLTVGYDYNAMQg--VLVTPMAGLSYLKSSDENYKETGTTVANKQVn----SKFSDRTDLIVGakvaGSTMNITDLAVY 1218 Rickettsia ri...
AAC36865     1406 LYLGLWYIGDYIs--GGNLTLVS-DlgsvNTLRTLSSTGRFAFNIGTNFVVK--DNHRFYFDFERSFGGKIITDYQFNIG 1480 Helicobacter ...
AAD41751      914 PYLSAAVSHEFS---DNNKVRINdT----YDFRNDISGTTGKYGLGVNAQLT--PNAGVWAEARYENGKQTESPITGGVG 984  Escherichia c...
CAC14222      564 PYIKLAITREFT---KSNAVAIN-N----IGFDNDFSGNVGKYGVGINATVA--NNTAIFAEVDYLNGSKIETPVTANIG 633  Yersinia pestis
CAC14220     1358 PYAIFAVDHEFA---KNNQVTVN-Q----EVFDNNLSGTRVNTGAGMNVNIT--PNLSVGSEVKLSSGKDIKTPVTINLN 1427 Yersinia pestis
AAC44731     1227 ITARAGLGYQFDllaNGETVLRDaSg---EKRFEGEKDSRMLMNVGMNAEIK--DNMRFGLELEKSAFGKYNVDNAINAN 1301 Escherichia coli
Q52657       1941 PELYAMVDYAFKnkvSAIDARLQgMtaplPTNSFKQSKTSFDVGVGVTAKHK---MMEYGINYDTNI-GSKYFAQQGSVK 2016 Rickettsia co...
BAA11383      953 LRSELGWQHQYGgleRGTGLRFNgGnapfVVDSVPVSRDGMVLKAGAEVAVN--ENASLSLGYGGLLSQNHQD-NSVNAG 1029 Serratia marc...
ENF96680      390 PWLKAAVRQEYA---DSNQVKVNdD----GKFNNDVAGTSGVYQAGIRSSFT--PTLSGHLSVSYGNGAGVESPWNTQAG 460  Escherichia c...
WP_027868341  419 PYFKLAYVYDDS---NNDNDV-N-G----DSIDNGTEGSAVRVGLGTQFSFT--KNFSAYTDANYLGGGDVDQDWSANVG 487  Escherichia coli
CAA34402     1219 PEVHAFVVHKVTgrlSKTQSVLDgQv--tPCINQPDRTTKTSYNLGLSASIRsdAKMEYGIGYDAQI-SSKYTAHQGTLK 1295 Rickettsia ri...
AAC36865     1481 YRYNF 1485 Helicobacter mustelae
AAD41751      985 FRINF 989  Escherichia coli ETEC H10407
CAC14222      634 FRLRF 638  Yersinia pestis
CAC14220     1428 VGYSF 1432 Yersinia pestis
AAC44731     1302 FRYSF 1306 Escherichia coli
Q52657       2017 VRVNF 2021 Rickettsia conorii str. Malish 7
BAA11383     1030 FTWRF 1034 Serratia marcescens
ENF96680      461 VVWTF 465  Escherichia coli P0305260.15
WP_027868341  488 VKYTW 492  Escherichia coli
CAA34402     1296 VRVNF 1300 Rickettsia rickettsii
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