Conserved Protein Domain Family
HrpE_YscL_not

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TIGR02499: HrpE_YscL_not 
type III secretion apparatus protein, HrpE/YscL family
This model is related to pfam06188, but is broader. pfam06188 describes HrpE-like proteins, components of bacterial type III secretion systems primarily in bacteria that infect plants. This model includes also the homologous proteins of animal pathogens, such as YscL of Yersinia pestis. This model excludes the related protein FliH of the bacterial flagellar apparatus (see pfam02108) [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis]
Statistics
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PSSM-Id: 274165
Aligned: 20 rows
Threshold Bit Score: 84.2687
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
CAH38870  46 YAALDADRDAVLAaarqEADRVMAEAVARTEEMIAAAQ----SEYDAAAER---GYRDGYDQAFGKWMDRLADVADAQNR 118 Burkholderia pseudo...
AAQ73916  18 TVIIPAERVAAHR----RSRTLWEEANAQAETIVAQAH----DRARTLCEQ---AVEHAEAGFWQQANALLQGVQQERMD 86  Pectobacterium caro...
Q93PY3    18 NPLVPREVLADVE----NANQLLSHAQAKADELIRRAG----EKCEA-------MQKQTSLEFWQRADKQLKCWEHEREG 82  Pseudomonas fluores...
Q52478    17 EPILRREDIADSL----LARDILADARQQATQILALEQ----EKAEH-------LQQQALAQFWENANAFLGELQVQREA 81  Pseudomonas syringa...
CAH39025  18 GVLLKRAPLSQAA----RAERLLDEARRRAQRLVRDAE----READACRAH---AATAGYEAGFARAIAELAAGVERIDA 86  Burkholderia pseudo...
P55716    18 GPLIPASELNIWH----SAGDALAAAKRHQQRVRTWAR----AAYQRERAR---GYAEGLNTGAEEMSGLIARAVTEVAQ 86  Sinorhizobium fredi...
AAQ60264  27 ADYIEASEIIEQAr--eQAKSIIQDGEKKIENLCEMYE----EISEAAWQDglkNLEQQAPALRQQAVANVVEWLIAEQE 100 Chromobacterium vio...
CAH19561  27 AEAMHSQDLLAQAn--aQAAEILQAAEQARVLLLDQAA----EQADA-------LIGQARVQMETALLAQHVRWLVGAEQ 93  Yersinia pseudotube...
P74853    27 TLQLTLFAQEQQAk--rVSHAIVSSAYRKAEKIIRDAYryqrEQKVEQQQElacLRKNTLEKMEVEWLEQHVKHLQDDEN 104 Salmonella enterica...
AAM46698  18 AELIRIEQLQQHQ----RGLAVIEEARQQADVLLDEAR----RQAHESIAV---ATGQAEQQFWRQADEILRGWQQEREQ 86  Erwinia chrysanthemi
CAH38870 119 LQLRMRERLADIVASAVEQIVRAE----SRETLFKRALASVERIVDG-ATYLRVVVHENDLDQARAIFGTLEARWrefgr 193 Burkholderia pseudo...
AAQ73916  87 LEKIMITQAGQLLRDALAHLLDKT----PALSRHHALLRQLLKQQQG-ESRGTLYCHPAQLADVQHWLDAHAHLE----- 156 Pectobacterium caro...
Q93PY3    83 ILASLEHHATLVINQAIQRILDET----VEPQRLQALIQQLLASQIP-QVNATLLCCPSEFEHVKKYLASYGATL----- 152 Pseudomonas fluores...
Q52478    82 LQEQAMTAVEELLSESLRHLLDDT----TLAERARALARNLAASQLN-EAVATLSVHPQIADPVAEWLADSRFSEh---- 152 Pseudomonas syringa...
CAH39025  87 QRATLLERVVDDVRRSLEHLLDD-------PDLLLRIVNALASRRACaTDRPLRVSVPPHAKRIAPAIRERLNDA----- 154 Burkholderia pseudo...
P55716    87 RKAVLEKELPQLVIEILSDLLGAF----DPGELLVRAVRHAIERRYNgAEEVCLHVCPTQVDMLAREFAGCDGREkr--- 159 Sinorhizobium fredi...
AAQ60264 101 LEHKIIERLEGQLCDILIKVFKEYygqqNESQLLINLLRERVRALLD-SEEGVLYVCPEQYEELKQALISFPKLL----- 174 Chromobacterium vio...
CAH19561  94 LESLLITQVRHRILAAITSVVTTWsgeqPMSQILIQRLGDQAEKMAQ-QGELTLRVHPQHLPAVTTALGERLRCVg---- 168 Yersinia pseudotube...
P74853   105 QFRSLVDHAAHHIKNSIEQVLLAWfdqqSVDSVMCHRLARQATAMAE-EGALYLRIHPEKEALMRETFGKRFTLIie--- 180 Salmonella enterica...
AAM46698  87 MESWLVSQCSQLLNDAMTQLLKTV----PDAERYPALLRQLLRTQGG-EGSGTLYCHPERQADVSAWLTEHSHLG----- 156 Erwinia chrysanthemi
CAH38870 194 piaMSVVADKRLAPGSCVCESDFGAIDAS 222 Burkholderia pseudomallei K96243
AAQ73916 157 ---WRLASDEALDSDAMKLITAHGVMSLS 182 Pectobacterium carotovorum subsp. carotovorum
Q93PY3   153 ---WKLQPDATALPQTLTLRTNEGDFLIN 178 Pseudomonas fluorescens
Q52478   153 ---WQLKRDATIASDSLRLSDANGAFDIA 178 Pseudomonas syringae pv. tomato
CAH39025 155 -----YPSAQVVVADTRTFVVESGEDILE 178 Burkholderia pseudomallei K96243
P55716   160 -pkVRIEPDPTLSPQECVLWSEYGNVALG 187 Sinorhizobium fredii NGR234
AAQ60264 175 -----IESDASIMAGKALLQTPLVILSLS 198 Chromobacterium violaceum ATCC 12472
CAH19561 169 --nTEMAADQAQLSSPMLQLTLSLHHHLS 195 Yersinia pseudotuberculosis IP 32953
P74853   181 ---pGFSPDQAELSSTRYAVEFSLSRHFN 206 Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
AAM46698 157 ---WKLSNDDALAQDTLKLITAQGVMTLS 182 Erwinia chrysanthemi
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