Conserved Protein Domain Family
ygfZ_signature

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TIGR03317: ygfZ_signature 
folate-binding protein YgfZ
YgfZ is a protein from Escherichia coli, homologous to the glycine cleavage system T protein, or aminomethyltransferase, GcvT (TIGR00528). Homologs of YgfZ other than members of the GcvT family share a well-conserved signature region that includes the motif, KGCYxGQE. Elsewhere, sequence diverge and length variation are substantial. Members of this family are mostly bacterial, largely absent from the Firmicutes and otherwise usually present. A few eukaryotic examples are found among the Apicomplexa, and a few archaeal sequences are found. Two functions implicated for this folate-binding protein are RNA modification (a function likely to be conserved) and replication initiation (a function likely to be highly variable). Many members of this family are, at the time of construction of this model, misnamed as the glycine cleavage system T protein. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other]
Statistics
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PSSM-Id: 274518
Aligned: 84 rows
Threshold Bit Score: 64.4845
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
NP_531750    137 AAYEALRVEHGIAESGRDYAlQDAFPHDV-LMDV----NDGVSFKKGCFVGQEVVSRMKHRGTARRRVVTVSA 204 Agrobacterium tumefaci...
GAE71875     174 lAWEALRIAAGIPRIGLDTD-DRTIPNEI-GLY-------GTHMDKGCYRGQETVARVYNLGRPPRRLTLLQL 237 Propionibacterium acne...
WP_011293296 197 WAYEARRIAAHRPRFGIDTD-HRAIAHEM-GWIG-----SAVHLDKGCYPGQETVARVHNLGRPPRRLVMLHL 262 Thermobifida fusca
WP_011563169 182 eeyeaaRIAAGVPRFGTDFT-PENFPAEA-GLLE----R-AVSFEKGCYPGQETVARMRYRGHPNRTLRRLlv 247 Rubrobacter xylanophilus
WP_011523430 216 EALELHRIATGIPAFGQDIR-ERDLPQET-AQ------SHALHFSKGCYVGQEIVERIHSRGNVHRGFTGFSL 280 Candidatus Koribacter ...
WP_029766183 125 ELYPLYTLLKGLPLLS--DI-QGELPQSV-GL------LHLVDYGKGCYVGQEIMARTEGK-EVPYRLVGLRA 186 Firmicutes bacterium J...
WP_011096616 175 HALLAGLIAAGRPSMR-EVD-ELSLPHEL-GWLR----T-AVHLTKGCYRGQELVAKLHNLGRPPRRMVRLML 239 Tropheryma whipplei
WP_011265974 213 MAYTAERVKALEPAAGVDLD-DKTIPHEIpHWIGrgehLGAVHLTKGCYRGQETVARVDNLGRSPRVLVLLHL 284 Corynebacterium glutam...
WP_014318143 197 MAYTAARVRSVQPVMSLDMD-ATTIPHEAaSLIGrgdhIGAVHLNKGCYRGQETVGRVENLGRSPRVLVMVLI 268 Corynebacterium diphth...
WP_011141472 159 ERFEAWRIEQGLPAWDKELN-DNLIPLNL-GIDG------AISHDKGCYTGQEVISRATFVGHPAQELVGLLA 223 Gloeobacter violaceus
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