4Z4K


Conserved Protein Domain Family
Zn-C2H2_12

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pfam18112: Zn-C2H2_12 
Autophagy receptor zinc finger-C2H2 domain
This domain is found in calcium-binding and coiled-coil domain 2/NDP25 (CALCOCO2/NDP25) found in Homo sapiens. CALCOCO2/NDP25 is an ubiquitin-binding autophagy receptor involved in the selective autophagic degradation of invading pathogens. This domain is a typical C2H2-type zinc finger which specifically recognizes mono-ubiquitin or poly-ubiquitin chain. The overall ubiquitin-binding mode utilizes the C-terminal alpha-helix to interact with the solvent-exposed surface of the central beta-sheet of ubiquitin, similar to that observed in the RABGEF1/Rabex-5 or POLN/Pol-eta zinc finger.
Statistics
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PSSM-Id: 407946
Aligned: 8 rows
Threshold Bit Score: 54.5733
Created: 26-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
4Z4K_A       237 KKCPLCELMFPPNYDQSKFEEHVESHW 263
NP_001263138 311 KTCPMCGKQYSSQVSFNAFREHVEMHF 337
KPI91296     308 KMCPICGETFKKHIEFSIFQSHVEQHF 334
ERL84810     193 RVCPLCSKVYQKDVDFALFERHVEEHF 219
EDO49508     543 RECPMCSLSFSPGTAQNEFEKHVEGHF 569
XP_003405104 654 KECPICKERFPAESDKDTLEDHMDGHF 680
KGL83302     762 KKCPLCDVMFPPNYDQSKFEEHVESHW 788
EFX70876     301 RICPLCENIFSTVISQDEFVDHVMSHF 327
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