Conserved Protein Domain Family
Cdc13_OB2

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pfam18691: Cdc13_OB2 
Cell division control protein 13, OB2 domain
Cdc13 is an essential yeast protein required for telomere length regulation and genome stability. Cdc13, like a number of single-stranded telomere binding proteins, consists of several oligonucleotide-oligosaccharide binding (OB) folds. These folds potentially arise from evolutionary gene duplication and are involved in multiple functions, including nucleic acid and protein binding and Cdc13 dimerization. This entry represents the OB2 domain, second OB-fold counting from the N terminus of Cdc13. Biochemical assays indicate OB2 is not involved in telomeric DNA or Stn1 binding. However, disruption of the OB2 dimer in full-length Cdc13 affects Cdc13-Stn1 association, leading to telomere length deregulation, increased temperature sensitivity, and Stn1 binding defects. Hence it is suggested that the dimerization of the OB2 domain of Cdc13 is required for proper Cdc13, Stn1, Ten1 (CST) assembly and productive telomere capping.
Statistics
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PSSM-Id: 408468
Aligned: 5 rows
Threshold Bit Score: 129.481
Created: 27-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_003688570 349 GEKLeySGQFIELYPSRFSDFSFLSKTSLRVYFQPFECVSEKE----DIYgIIPNIDCIEILLTSAEEIKELFGTLVHNS 424 
EJT42401     372 VERF--QGKFVGMYPPEFSSISEFKRCTLKLYFTSFLPSSKTP----DSV-LIPGTNCIEIIIPTTERIRELFGTLNCQS 444 
EDO17978     298 GERYtvEGKFLNIFPIRFDSLDNLKYWSLRLYFQPTEWYDRNA----DII--IPNKNCIEIMVFNLDEFKNLFGTLVNNS 371 
CCE64292     232 KETK--TGKLIAMFPTYFNSMELLKNTKIHLFFIPEEMENEHQrtlpNYE-LKPNINCIEFVMSVKE-MQQVFGKI-EDS 306 
XP_001642283 239 VHSI--TGTIAGTYPSDFKDLSDLKDTILRLYIIPREWETEAE----RQI-LIPNSNCIEVLILDASEIHKFFGRLVNDS 311 
XP_003688570 425 KSLKQLLF---HHKMVVELENTKFCLNKKSRIYTtaLKIKNTK 464 
EJT42401     445 SKISNILLlnkPHPISVEIEKIMWENDETIRPGLavWNLKNIN 487 
EDO17978     372 ESLSLLLF---SYEVSLEIKRSKWSFDKTIFTSV--WTLSNMK 409 
CCE64292     307 KSLKTIAFn-kDSIIDFQLMKIAYKNNLYSAI----WKLKRFR 344 
XP_001642283 312 QSFREVIS---STEFFIRLERAKLQLENSFHTFY--WTFQTVN 349 
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