Conserved Protein Domain Family
RTP1_C2
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pfam10304: RTP1_C2 
Required for nuclear transport of RNA pol II C-terminus 2
This domain is found towards the C-terminus of required for the nuclear transport of RNA pol II protein (RTP1). RTP1 is required for the nuclear localization of RNA polymerase II. This family is found in association with pfam10363.
Links
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Statistics
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PSSM-Id: 431206
Aligned: 62 rows
Threshold Bit Score: 31.9974
Created: 23-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
XP_012550078  184 NLLPIYRSLKNVYRDENEDpVLRLHAQLALEELND 218 
CCF54300     1257 MLQRLKQVAAYLVANDSDA-ILRTHAYDCLQHVEA 1290
Q755H0        904 DLRRLADVVRNTATNEKDY-LTAEPLADALQLLEG 937  Eremothecium gossypii
EPB91501      928 SLRRTYRTLRYIEETDPDE-LTRYQARVALSDLDA 961 
EFA77562     1000 ELRTLYNRLKTLESTDTDT-ICKYHARNALAELDT 1033
XP_003292375  403 ELKEIYNTLKKTEFYDPDE-ICKYHARAALYDLET 436 
Q54Y12        406 ELKSIYNTLKNVEFYDQDE-VCKYHARSTLYDLEK 439  Dictyostelium discoideum AX4
Q7PN46        648 YLLLIYRFLKHVIATDKDD-VTKLQAAVALDHLKA 681  Anopheles gambiae str. PEST
CCC55796      422 QLLPLYRTLKHVARVDRDD-VVVFHANRALTALDD 455 
XP_002052661  847 MLLPIYRLLRAIEANESCDpQMRQHAANGLKILNE 881
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