3EVY


Conserved Protein Domain Family
EcoR124_C

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pfam12008: EcoR124_C 
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Type I restriction and modification enzyme - subunit R C terminal
This enzyme has been characterized and shown to belong to a new family of the type I class of restriction and modification enzymes. This family is involved in bacterial defence by making double strand breaks in specific double stranded DNA sequences, e.g. that of invading bacteriophages. EcoR124 is made up of three subunits, HsdR, HsdS and HsdM. The R subunit has ATPase and restriction endonuclease activity. This domain is the C terminal of the R subunit.
Statistics
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PSSM-Id: 432259
Aligned: 131 rows
Threshold Bit Score: 74.5901
Created: 24-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3EVY_B          8 VLMKPYEKLVERFNEMAAEFLSYFPTvks---vgNL--ESELDKRRFVILFRAMLRLRNEVKGYNeFdaedl-------- 74   Bacteroides f...
WP_012360511  758 LFVDHLGDHLKSTNECFATIEALFTDpktgqpdfSQlpDVEADQGEFAKTFNRMYRELQAAQVQG-Ftwdkdtyyfda-- 834  Corynebacteri...
WP_013236478  753 LFADRLPINLERMNACFVEICAIFSAagi--tdfSKlpDDLAARAAFAKQFNRFSAILEAARIQG-Ftweksvyefgdd- 828  Herbaspirillu...
Q2KZC4        754 LFADQLPRNLERLNDCFTEISAIFSVsgi--tdfAKlpDDLAARAVFAKQFNLFSAILEAAKIQG-Ftwdqsvyefdte- 829  Bordetella av...
CDC66916      760 LFVEKLPYNLKKLNVIYMDISEVFKSsgv--sdfTKlpNDHAEKAKFAQLFKDFNHHLDAAKLQG-Fnweqdiytfndee 836 
WP_008522444  748 LFADRLNQNLEHMNSIFTQIKNLFESsgi--anfERlpEETAERKKFANLFKLFNHYLEAAKVQG-Fqwnvlscgftdpd 824  Jonquetella a...
WP_012420940  748 LFVEKLNRNLELLNTIYQDISDLFHQagi--edfSHlpAEPEECKKFARLFRDLNARMEAAKIQG-Frwdkriyqfa--- 821  Akkermansia m...
WP_012938521  753 LFADHLPQNLQHMNERFQDMAQVFREagv--pdmERlpEDNTVRGKFAKLFREFSTYLQAAQIQG-Ftwdtqeysitdld 829  Acidaminococc...
CCX64543      753 LFADHLPENIRHMNVTFEEMKYLFVNagq--edmLQlpEDKTVCARFAKLFREYSTCYQAAQIQG-Fvwtktdyvvpvse 829 
Q8G3H5        768 LFVQKLPANVKSMDTRYREILDVFSDnge--sdlMQlpESVEARRKFAKEFVELNRYLEAAKVQG-Fdwstpeykvdstd 844  Bifidobacteri...
3EVY_B         75 -------------------tieeQRFADYQSKYLDMSnefaitsEKEDAESIL-QD-------IDF----ELELvhRDII 123  Bacteroides f...
WP_012360511  835 ------------plepivvelteDTYTTLVTRYKELG-------KAGDDSEQLpED-------APFdidvHITHidTDRI 888  Corynebacteri...
WP_013236478  829 ------------akmqvtltishHQYLTLLQRYKELG-------GGSVGSGES----------IPFdidsHITEidTGKI 879  Herbaspirillu...
Q2KZC4        830 ------------pkqsivvvitkLQYLTLLQRYKELG-------AGGGGAGET----------IPFdidsHITEidTGKI 880  Bordetella av...
CDC66916      837 ----------tglnetikldfgsNDFMALVQRYKELSng---ndDENGNGGSDgDD-------VPFdlvgYITEidTGRI 896 
WP_008522444  825 ----------tgedrwvdvlideRTYMVLVIRYKELFs------GGGDVENGE--D-------LPYeldgHLTTidTATI 879  Jonquetella a...
WP_012420940  822 -------------dstmevaldeHTFNVLSVRYNELFg------GGGGESDGHvPD-------VPYdipgFPIPisTGAI 875  Akkermansia m...
WP_012938521  830 t---------gektgtisviptrEQYKILLERYKELRne---psGGGGGVDPT------------FaidpYLTElsTGLI 885  Acidaminococc...
CCX64543      830 dnse---edepektellhvlptrTEHDILQQRYKELAk------EPGLGSGYE----------VPFeidpYLTDqnTGTI 890 
Q8G3H5        845 tddanedndehdesevvrpqideRTYLILAQRYKELF-------YGNSSCGGDsDDgvknnpeAPYeldgYLTEinTGLI 917  Bifidobacteri...
3EVY_B        124 NVMYILALLQDLKPEs---SSYPKDRKAVLDTMDS--NPELRSKIALIDNFIKLHIDgrqsnDLPADMESDLDKYIATQK 198  Bacteroides f...
WP_012360511  889 DAEYLNSKFDKYLKAlq-dGVPQDVLDDLLEELHDsfARLSKDDQRYANRWLHDLQAgdvtlQPGKTVHDYINEYRITER 967  Corynebacteri...
WP_013236478  880 DADYMNSRFAKFLKVl--hGGDEQAKEATLAELHRsfTSLSQEDQRIAEIFLHDIQRgdvqiDPNRTFRDYLADYQAQAK 957  Herbaspirillu...
Q2KZC4        881 DADYMNSRFAKYLKEl--qSGDEPSKEVTLAELHRsfTSLSQEDQKLAEIFLHDIQRgdvqiDPARTFRDYLTDYKTAAK 958  Bordetella av...
CDC66916      897 DAAYMNSRFEKYLKNlhqaDITEEQLQASLDELHKsfATLTQDEQKYAEIFLHDVQRgevvvEDGKTLRDYITEYQYKAK 976 
WP_008522444  880 NTDYMNSRFTKYLKLfhqkEASADLLKQAEEELHKtfAELSQEEQKFAGIFLRDIQRgdvvpEDGKTLRDYITEYMTKAK 959  Jonquetella a...
WP_012420940  876 DNDYMNSRFEKFRKLl--gNATEEELQQTEQELHKsfAFLSQEEQKYADIFLHDIKRgdvvpVEGKTFRDYVTEYMAKAQ 953  Akkermansia m...
WP_012938521  886 DSQYLNSRFEKYRKIltqpDVDPAEKETTLEQLHKafASLSQEEQKYANLFLHDVEAgdvrmEPDCTFMDYIHQYANAER 965  Acidaminococc...
CCX64543      891 DYDYMNSRFDKWRKQldqqDISREELDATLEELHKsfAFLSQEDQKHANRFLHDVQTgdihlEKGKTIQDYISEYAVSEK 970 
Q8G3H5        918 DTDYMNANFNKWLKAl---KENSPELAEMSAQLHRsfAALSRDEQRLAELFLHDVERgdvevEAGITLRDYITRYAAREK 994  Bifidobacteri...
3EVY_B        199 AIAIEQVATEEGID-----ST-LLHEY 219  Bacteroides fragilis NCTC 9343
WP_012360511  968 DRQLVRLHERLGLDmvqlhRIlDIRVT 994  Corynebacterium urealyticum
WP_013236478  958 NKEIEAIVEGLGIDaskllALmNAKTT 984  Herbaspirillum seropedicae
Q2KZC4        959 DKEVAAIVSALGVHaakliALmSTHLT 985  Bordetella avium 197N
CDC66916      977 NDQIHSFAVAFGLDedllkNMmQLNLT 1003
WP_008522444  960 DAQIHRFAALFGLDegklrDLmAQKVT 986  Jonquetella anthropi
WP_012420940  954 DDRIHRFAAVFGLDetllrGMmSHRVT 980  Akkermansia muciniphila
WP_012938521  966 KRQVGKVTKYFGIPeevvcQMlDAHVN 992  Acidaminococcus fermentans
CCX64543      971 KEQVHRLSVYLGCVeelvySMlDAHVT 997 
Q8G3H5        995 NEQVDKLVDRLGVNrsvveEFlAKRID 1021 Bifidobacterium longum
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