Conserved Protein Domain Family
RGG_Cterm

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TIGR01716: RGG_Cterm 
transcriptional activator, Rgg/GadR/MutR family, C-terminal domain
This model describes the whole, except for a 60 residue N-terminal helix-turn-helix DNA-binding domain (pfam01381) of the family of proteins related to the transcriptional regulator Rgg, also called RopB. Rgg is required for secretion of several proteins, including a cysteine proteinase associated with virulence. GadR is a positive regulator of a glutamate-dependent acid resistance mechanism. MutR is a transcriptional activator for mutacin biosynthesis genes in Streptococcus mutans. This family appears restricted to the low-GC Gram-positive bacteria, including at least eight members in Lactococcus lactis. [Regulatory functions, DNA interactions]
Statistics
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PSSM-Id: 273772
Aligned: 14 rows
Threshold Bit Score: 188.247
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
AAD04237      67 YAFTQYQESDLFKT---GKKLVELQTKKDIKGLKKILKdy---pDTETYNVYNRLNKLVIKAAVYSLDSSFEITNEEKEF 140 Streptococcus m...
P49330        66 YVYHNYREADDVVL---SQKLSEAQRENNIVKLESILAgseamaQEFPEKKNYKLNTIVIRATLTSCNPDYQVSKGDIEF 142 Streptococcus g...
CAC33841      62 FLLSEKKCLEYDTE---FLKLTNAFYSKDISALQQIHNetk-lmYQRTLEIRFNHLSALSQIYYDMCSHN-TTDQTNTNI 136 Lactobacillus s...
WP_000400556  63 DKARNFHNHEHVSM---MAQIIPLYYSNDIAGFQKLQReqleksKSSTTPLYFELNWILLQGLICQRDASYDMKQDDLGK 139 Streptococcus p...
WP_009931576  63 LMYHQEALPEKEDF---WEAYARTCKTDEASAWESLYQk-----ISLEKGKVNQVKSAAIKLELDHIKGKQVADKKAVQI 134 Listeria monocy...
WP_023078146  10 FISNNFKQYKEFID---MDTAKHYFECRNIEGLNHILDs-----YKDSKSTKEKNLFALVKVLLATLTEEDCLTER--TY 79  Streptococcus p...
WP_010905739  70 YFFNNYHSDYFVEI---CDEIEDANYMQDTVKLKAINSe----aGKYDNEQGNRMIFLATQNLL------YGLTEREEVE 136 Lactococcus lactis
WP_000837499  63 LILHDEDYTKTESFanlVQYIRKQYSSQSINNIACLLSd-------TSDYTLNSFEKTMVKSILHTMDSNIIPSDEELLH 135 Streptococcus p...
WP_003130357  65 HFINNFSMDYKEEF---LEDIILADIADDVDKLHSLYL--------EAMEYDSKMLAYCAKSRYET------LTQMEADD 127 Lactococcus lactis
WP_010905872  64 LIVNNYMPNFQEFF---ILELEKAEFSQNRDKIKELYS--------EVKETGNHLLTITVKTKLGT------ISQIEVKE 126 Lactococcus lactis
AAD04237     141 LTSYLYAIEEWTEYELYLFGNTLFILSDDDLVFLGKAFVERDKLYRELSE-HKKRAELVLINLILILVEHHSFYHAQYFI 219 Streptococcus m...
P49330       143 LTDYLFSVEEWGRYELWLFTNSVNLLTLETLETFASEMINRTQFYNNLPE-NRRRIIKMLLNVVSACIENNHLQVAMKFL 221 Streptococcus g...
CAC33841     137 IRNYLLNVENWTYYEWTLFNNSLSIFNIEDVQFLINKSLQSLSIYETHNN-FGNENILVLGNIAAMYIKSYNFEKIPSLV 215 Lactobacillus s...
WP_000400556 140 VADYLFKTEEWTMYELILFGNLYSFYDVDYVTRIGREVMEREEFYQEISR-HKRLVLILALNCYQHCLEHSSFYNANYFE 218 Streptococcus p...
WP_009931576 135 LENYLIEAVFWTLQDIFLFTRMMHYLPLKSRVPFYYKLLNTLDRYRHFER-GRSISQSALASIMDDFIEKNEIEYMELMI 213 Listeria monocy...
WP_023078146  80 LSNYLINIETWSHYETVLFNNCMFIFESCFIEMVFSKVILNLDKYNTLRY-YGNESIRMFVNMLILFIQRQEYDKASEIL 158 Streptococcus p...
WP_010905739 137 VTDLMFNIEVWSYFELSILSFVVEHLNTRLTLSLMKDFWKENLHYLKVKK-YREKIVQIVCRAAVKYISENKYSIAQKLL 215 Lactococcus lactis
WP_000837499 136 LTDYLFKIEKWGYYEIILLGNCVRTINYNSYFLLTKEMLNNY-IYSSLNKtNKQIVSQLAINCFILSIDKEEFSNCSYLI 214 Streptococcus p...
WP_003130357 128 VVEYLYDVGEWGYFELSIFYLTLDSFGEREIMYLMKELWGKSKHLYGVFK-YRRRVLQSSYRAVVLLSSKGARDSARSIL 206 Lactococcus lactis
WP_010905872 127 IETYLCNIEEWGYFELTLFYFVSDYLNVNQLELLLFNFDKRCENYCRVLK-YRRRLLQIAYKSVAIYAANGERAKAENIL 205 Lactococcus lactis
AAD04237     220 EKLENMLT-Y-QDMFARIFLNFLKKVMAYLNG-KSTDLSDIEDYIRLVEQLGnPTLAMFLRTNLEQIMMK 286 Streptococcus mutans
P49330       222 NYIDNTKIpE-TDLYDRVLIKYHKALYSYKVG-NPHARHDIEQCLSTFEYLDsFGVARKLKEQFERIQLT 289 Streptococcus gordonii st...
CAC33841     216 NRMETIHLsE-IAVFERLIFSFFEGVSLYVLGtDTS-LKKSLDVIKVMDNMHlVHLSKDHQELLNIVQKN 283 Lactobacillus sakei
WP_000400556 219 AYTEKIIDkG-IKLYERNVFHYLKGFALYQKGqCKEGCKQMQEAMHIFDVLGlPEQVAYYQEHYEKFVKS 287 Streptococcus pneumoniae
WP_009931576 214 KSLEKISEdC-DGTYSKILCMYYRGIVRWREGeKREGSEEIEQAVAILRALGyENKAAEYETMYRQFARE 282 Listeria monocytogenes
WP_023078146 159 AKIEDYQLnD-DCLYERCCVSFFDGIIGLING-KEGAEQKCVQILEIFQLLNcKTIHHMFQTYLEAIKHK 226 Streptococcus pyogenes
WP_010905739 216 EDVNIALIpYkKDLFCRNMSRFTLGLLLYKSDkTVDGKAKMESSIRLFDELGlPEMKAYYQKIFDESVKN 285 Lactococcus lactis
WP_000837499 215 SKIKTLLDnE-LNFYEQTVFLYATGYFEFKRCqSTSGIEKMKQAIQVFDILGeNKLKLHYTDHFNKPVNK 283 Streptococcus pneumoniae
WP_003130357 207 QKSYP-KDdF-YDLYVENLRNLAHGFYSYCFKdKISGEKQIKNAIEIFGQVGyEDLADYYQKRYQKLLGK 274 Lactococcus lactis
WP_010905872 206 EITKKYRTvG-VDLYSEVLRHLARGIIIFNFEnAEVGEEKINYALETLEEFGgMKIKEFYQKKMEKYLKK 274 Lactococcus lactis
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