Conserved Protein Domain Family
DDE_Tnp_IS66

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pfam03050: DDE_Tnp_IS66 
Transposase IS66 family
Transposase proteins are necessary for efficient DNA transposition. This family includes IS66 from Agrobacterium tumefaciens.
Statistics
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PSSM-Id: 427113
Aligned: 63 rows
Threshold Bit Score: 162.035
Created: 21-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
jgi:Daci_1412     184 KGLFSEGLLAWVITSKYVDGLPLYRQAALLGRF-GGsDLSRNTMAASVVRVGQAVQP-VINLLRDRVLDAPLIFGDETEI 261
jgi:RoseRS_0353   174 SVRDGPGVRALVTQLSVDHNMPLEQMCRLFEDVfGY-ALNRETVATALEQGYELAAA-VEAATVEQLKRAEVAHVDETGL 251
jgi:Franean1_3164  50 PVQYGPRVTAAAVYLYAGQFLSKDRTATALAELvGI-PLSAGTVAVMTRRAAAGLDG-FLTTVRGLLAGSEVLGADETGL 127
Q2J5E9            168 RLVWGPRMLARAVWLVCAHHLPIRRAAAVLTVMvGA-TVSAGWAGGVRARAARLLENtFLPHVRALIAAAPVAHADETTA 246 Frankia ca...
Q12TS2            178 PTQYGLRLASLAVYLHDYQLLPYERSCELLADVcGC-EISPATLARAEKTCFEKLED-FEQQIKNFLIESPVINCDETGM 255 Methanococ...
Q8TH53            170 PIQYGPRLLASILYLRNYQFIPYERICDLVEDFyGV-RISPATIKRAEIECFQNLQP-FEEAAMKHLLASHTAHCDETGM 247 Methanosar...
Q8TQW2            162 pVQYGPNILASAVYCKNHHFIPYERISEFFEDImGI-KICPATIIRAEKECFQNLEK-FESIIRERLLASPVIHCDETGM 239 Methanosar...
Q3ASS1             74 YISYGARLKAYTVGLVQGHFISLARVTEIVSDQyGV-KPSDGSVQRWISQASKNLTT-TYTAIGETISNSAVAHFDESGI 151 Chlorobium...
Q5KUN9            175 HVQYGPRLTALVVYLHHIQLIPYKRLSDTIEALyQH-SISTGTLANMVKRGREALES-NMDVIEDALLESNILHVDETSL 252 Geobacillu...
Q5QL55            173 hVQYGPVITSLLLYWNHAQLIPCERITEMVKTLfHH-PISAGTVVNMTRRWQPVLEA-AIEEIEAALLTSSTLHVDETSL 250 Geobacillu...
jgi:Daci_1412     262 QvlkeagrSAQSKSYMWAQMTDGsgasgtgppIRLFAYSPSRSTEAA-QRLyvG----VReggVLMSDGYEVYNKIAlan 336
jgi:RoseRS_0353   252 R-------GAGRLRWLHTASDSR---------YTHLFVHPKRGGEAVrSDA--SvrkdFGg--RAIHDCLPASYQFE--- 308
jgi:Franean1_3164 128 R-------VAGKLHWVHCARTDK---------YTLIDCHPNRGRAGI-DTL--GvlpgFGg--VVVHNARAPYDSYT--- 183
Q2J5E9            247 R-------ADGALRYVHVAATDY---------LTALHT-GDRTAETI-DAG--GiwpaFTg--VLMRDGYQGYTHLT--- 301 Frankia ca...
Q12TS2            256 R-------IEGKRQWLHVASTNK---------MTCYYPHQKRGSDAM-NAM--GilpnFNg--TVVHDFWKSYYKY---- 310 Methanococ...
Q8TH53            248 R-------VLGTKWWLHVVSNNL---------WTYYFPHPKRGTEAM-DAL--GflpqYNg--VAVHDGFASYNKY---- 302 Methanosar...
Q8TQW2            240 K-------IEGKRHWLHVASNDK---------YTCYFPHSKRGSEAI-NAM--GilpeFKg--VAVHDGWKPYNTY---- 294 Methanosar...
Q3ASS1            152 R-------AQGKTQWLHVAATTE---------AVYYTAHAKRGQEAM-SAA--GilplFNg--VAVHDHWKPYFRFD--- 207 Chlorobium...
Q5KUN9            253 R-------IKGKLAWVHVACTSK---------YTYLAPHASRGKKAT-DDI--GilprYQg--TMMHDGFGTYPKYT--- 308 Geobacillu...
Q5QL55            251 R-------VKGTKQWVHVASTSK---------ETRYGIHRSRGKQAT-DDI--GilprYKg--TMVHDAYSVYPMYT--- 306 Geobacillu...
jgi:Daci_1412     337 KLVHIGCWAHCRRYFNDALQAlpkanrgpEQLAARFIAL-IGTLYR-------VEALAKeqRl------dVNALLQSRQT 402
jgi:RoseRS_0353   309 QANHGACLAHILRELQGLVEq--------GSAWAEVMRDfLWHLYE-------QArpl-----------qgEAAAAARNR 362
jgi:Franean1_3164 184 DATHQLCVAHVLRELQAVVEGaq----agQWCWAAQATDaLVALHT-------QTTEA---Aaaga--agpDLAELAAQT 247
Q2J5E9            302 RALHAWCGAHTLRDLRSIHDGdr-----gGQVWADAMATtLLDAHH-------AACDA---RdaganalapEAVALIRNH 366 Frankia ca...
Q12TS2            311 DCDHSICNAHLLRELTSVSEn-------dNQLWSKAMNIlLIDVKK-------SVDQI---Rgmsg-cmkpERIKEFEDW 372 Methanococ...
Q8TH53            303 ECEHALCNAHLKRELTGIEEn-------fEQQWAKEINElLSEMKK-------YTDEC---Remei-pidpEKVRELEGI 364 Methanosar...
Q8TQW2            295 DCDHALCNAHLQRELTGIEENy-------kQQWAKEMNElLTEMKK-------YTDECKe-Qlke---ldFEQIKALEER 356 Methanosar...
Q3ASS1            208 HVLHSLCGAHLLRELNAFD-----------ETLQHRWPVqLKQVLIdaknavaQAKKA--------------KQTSLPPE 262 Chlorobium...
Q5KUN9            309 QATHALCHAHHLRELKGFIEQg--------HTWASRMTTfLLAAKQ-------AVEAHhga-------lseKEAKRWERV 366 Geobacillu...
Q5QL55            307 QASHALCHAHHLRELREYTELy-------qHSWSNKMAEaLLEMKQ-------AVEKAGg-Al-------PEEKVRYWEA 364 Geobacillu...
jgi:Daci_1412     403 HSVPVLQEIQALLL----ANV--------HAVLPGSLLGKALHYLSSQWVKLERFVTSGHYPIDNNGCENSIRPFVIGRR 470
jgi:RoseRS_0353   363 YRQIVSAAELAEPP----Peqk-----agPGRPKSTAGRNVLRRLKEREEAVLAFALVEGVPFTNNQAERDLRPAKVKQK 433
jgi:Franean1_3164 248 --RLLRHAAHIgisq-----------tadRDTKLMAARHALACRLVDREADYLRFTRDLRIPADSNGCERDIRMIKLRQK 314
Q2J5E9            367 YRGALARGETDnh--------------gdRSSLAHD-ARTLIRRMRREEDMILRFVVDLTVPFSNNQAERDVRPVKVQQR 431 Frankia ca...
Q12TS2            373 YGQIIHIGIEENPQlqak--------skkRGRTKQTTAKNLLDRFIGYKNDILRFMHDLKVPFENNLAERDVRMMKVQQK 444 Methanococ...
Q8TH53            365 YDAIMQGGIEENPP----P-DplkeqvkkRGRKAQTKAKNLLDRFILHKEQILRFLNNLRVSFDNNQAERDIRMMKLQQK 439 Methanosar...
Q8TQW2            357 FDAAVMKGIEENPL----ALNpek--qgkRGKKPKTKARNLLDRFIEHKEKILRFLTDLKVPFENNQAERDIRMMKLQQK 430 Methanosar...
Q3ASS1            263 QIADLKQRYEQWLNygllIFSerpkinkqQGKGKQHPARNLLCRLRDFKDSVLRFIERFDVPFDNNTAERAVRPVKVKLK 342 Chlorobium...
Q5KUN9            367 YDRILAKAQHRl----------------eTMTPLPKKALAFVRRLQKRKEEALRFLREAHVPFDNNQAERDLRMVKVKEN 430 Geobacillu...
Q5QL55            365 VYDELLSNGRRELD----ERCr------qGSHLGVRKAENFIRRLEKRKQEALLFLRKKEVPFDNNQAERDLRMVKVKQK 434 Geobacillu...
jgi:Daci_1412     471 NW-LFADTVAG--A 481
jgi:RoseRS_0353   434 VS-GCFRTDQGaaV 446
jgi:Franean1_3164 315 VS-GCLRTLTGarQ 327
Q2J5E9            432 TSgGCWRTLAGlvD 445 Frankia casuarinae
Q12TS2            445 IS-GTFRSMQGalI 457 Methanococcoides burtonii DSM 6242
Q8TH53            440 IS-GTFRSIEGavA 452 Methanosarcina acetivorans
Q8TQW2            431 IS-GTFRTIQGaeA 443 Methanosarcina acetivorans
Q3ASS1            343 VA-GGFRAMGGaeA 355 Chlorobium chlorochromatii CaD3
Q5KUN9            431 IS-GTFREETFaqS 443 Geobacillus kaustophilus
Q5QL55            435 IS-GTFRQEDDaea 447 Geobacillus kaustophilus
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