Conserved Protein Domain Family
CZB

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pfam13682: CZB 
Chemoreceptor zinc-binding domain
The chemoreceptor zinc-binding domain (CZB) is found in bacterial signal transduction proteins - most frequently receptors involved in chemotaxis and motility, but also in c-di-GMP signalling and nitrate/nitrite-sensing. Originally discovered in the cytoplasmic chemoreceptor TlpD from Helicobacter pylori, it is often found C-terminal to the MCPsignal domain in cytoplasmic chemoreceptor proteins. The CZB domain contains a core sequence motif, Hxx[WFYL]x21-28Cx[LFMVI]Gx[WFLVI]x18-27HxxxH. The highly-conserved H-C-H-H residues of this motif are believed to coordinate zinc; mutating the latter two histidines of the motif to alanines abolishes Zn binding. This domain binds zinc with high affinity, with a Kd in the femtomolar range. This domain has been shown in E. coli to be a zinc sensor that regulates the catalytic activity of pfam00990. This domain also binds the chemoattractant HOCl at a site very close to that of zinc. It has been shown that zinc participates in HOCl sensing by forming a redox 'Cys-Zn switch' that reacts towards HOCl (Matilla et. al.,FEMS Microbiology Reviews, fuab043, 45, 2021, 1. https://doi.org/10.1093/femsre/fuab043).
Statistics
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PSSM-Id: 433401
Aligned: 326 rows
Threshold Bit Score: 31.3316
Created: 25-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_012567722          38 HLRW----------------------------IGRWhraafFwRearlPAEALAMPTafvqwvreakdaelshqpAIDRL 89   Rhodos...
WP_044002855          16 HMLFksklrsalfgsqt---aegpirdpqqcaFGHW-----L-T----QRVLP----------------------DFGHL 60   Hymeno...
Q2W2M7                34 HVDWlqswyssvlnwhd---rthptppadqcrFTAW-----F-D----AAGQSALAVy----------------pAFAEL 84   Magnet...
UCNUF:Cenrod_1152   1337 HRAWvirlekyvqdts----gdppllnpfecrFGRW-----L-S----GEGRYQHAHk----------------aCFDRI 1386
WP_012638414        1206 HRAWledldralrsgs----sdfpplgphqcrFGTW-----L-D----QLGDQLQPG-------------------FGQI 1252 Thioal...
IBRC:GU3_08190      1061 HRAWidsidralhqpd----spwpaleaehcrFGIW-----Y-R----HCAAPEQR-------------------RLAPL 1107
UCNUF:Cenrod_0851   1055 HRAWckqlrtavqqrt----qsppqldpngcrFGQW-----LnR----PATRQRFDHh----------------pGFGSL 1105
jgi:Hneap_0731        28 HFAWysqimaallfdq-----skhiqghhdckFGQF-----LdRteipPELKT----------------------EFDAV 75  
goetting:EBL_c04720   22 HYAWtghllslalhdsrvdetlmdplserrcqFGVW-----LhQ----LHQSVQVEEg----------------qFISDI 76  
BAN34822              29 HMTWmktlhralicdeipepldlseeahchckFGHW-----YyQ----GNNFPALREn----------------sVFLKI 83  
WP_012567722          90 ------VGLHEQLHRLARLV 103  Rhodospirillum centenum
WP_044002855          61 sesrelDRLHTQIHREASRL 80   Hymenobacter swuensis
Q2W2M7                85 ------GQLHHEIHFKADQI 98   Magnetospirillum magneticum AMB-1
UCNUF:Cenrod_1152   1387 ------VHLHRKVHTLGAAI 1400
WP_012638414        1253 ------DLLHRQVHALAAEL 1266 Thioalkalivibrio sulfidiphilus
IBRC:GU3_08190      1108 ------AGLHQQLHEQAAQL 1121
UCNUF:Cenrod_0851   1106 ------QNLHQTLHQRAQKL 1119
jgi:Hneap_0731        76 ------RNLHKQMHESASAL 89  
goetting:EBL_c04720   77 ------DNYHHQMHDQARVL 90  
BAN34822              84 ------GALHKMMHDDARTL 97  
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