Conserved Protein Domain Family
Mrr_N

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pfam14338: Mrr_N 
Mrr N-terminal domain
This domain is found at the N-terminus of the Mrr restriction endonuclease catalytic domain, pfam04471. Fold recognition analysis predicts that it is a diverged member of the winged helix variant of helix turn helix proteins. It may play a role in DNA sequence recognition.
Statistics
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PSSM-Id: 433880
Aligned: 114 rows
Threshold Bit Score: 46.4173
Created: 25-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
jgi:Msip34_2869    15 SEILHAYPSegDRGLSnASLYERIADRA-QLSPEDLNARApvGESKQpvNLLKRRIRWFQQTLKHAGILERVDgeRGVWK 93 
Q03EG9             14 NEVLKAMHRlgGQVTR-KDIRQDIRDNSdVISDNEVDKVRvsKKTGNkyRPFNWTLNFAIKYLIMTDYIETED--NRELE 90  Pediococcu...
Q1GBE9             15 IEVLKAMQAlgGRVTR-KEVKREICDHSeAISEDKVDEVKhsKKTGTpyRPFDYRFNFAVKHLITTGFIITED--NRNLE 91  Lactobacil...
tum:LSA_10840      15 SEALKAMQSlgGKLTR-KEIKREIRDHSkIISEETVDEVKisKKSGSkyHPFDYRFNFSIKDLITAGYIVTDD--NHILE 91 
BAK95223           14 CEALSAMRSlgGQTTR-KEIRREIRDHSdEISEQINDEQKtsKKSGVkyHPFVDRFNFAIKHLIAADFINTED--NRNLE 90 
CCY67677           17 KPILKVLQEagGQLER-SEIKERIADMDdQIAEYSVLEKKskQTGNTy-KEFNFKFNFAIKDLYFNDLLTYTD--SSPVT 92 
WP_015530035       24 KPILQVLQEagGQLER-SEIRDRISELDeHIAEFEQKLYTsnKTGNQy-KKFDFKFNFAIKELSYVGLISYVKf-NPKIT 100 Firmicutes
uascot:RHOM_10835  17 KPIIEVLQEagGQLER-AEIRDRISEKDeKIAEFEQKLYTsnKTGSKy-KKFDFKFNFALKELSYLGFLTYVRy-KPLVT 93 
CBK42902           25 GPLLDALCKlgGSGTP-DEGVERITIDF-AISDEVQNELL--ASGEL---RFRNRVAWTRFYLVCEERNDSSK--RGVRS 95 
CDM23075           15 GPLLDALRKlgGSGSP-DEVVDQIAADH-AVSDDAQNELT--SSGQP---RFKNQVAWARFYLTKEGLLGSSR--RGIWS 85 
jgi:Msip34_2869    94 LTNPAGDGLRK 104
Q03EG9             91 LSKKGRNInfl 101 Pediococcus pentosaceus ATCC 25745
Q1GBE9             92 LPEKGRTTKle 102 Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 = JCM 1002
tum:LSA_10840      92 LSEKGRTVKFE 102
BAK95223           91 LSEKGRKVDlv 101
CCY67677           93 LTEKGLYLdvd 103
WP_015530035      101 LTQDGANVDLT 111 Firmicutes
uascot:RHOM_10835  94 LTEKGAAVDVS 104
CBK42902           96 LAEGHKNGVRN 106
CDM23075           86 LTERGRATTlt 96 
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