Conserved Protein Domain Family
DUF4413

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pfam14372: DUF4413 
Domain of unknown function (DUF4413)
This domain is part of an RNase-H fold section of longer proteins some of which are transposable elements possibly of the Pong type, since some members are putative Tam3 transposases.
Statistics
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PSSM-Id: 433913
Aligned: 39 rows
Threshold Bit Score: 54.5606
Created: 25-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_015622740 379 STSSLPTS-------NLVLIEM-LEVRNTLVLGFN--N-CSG-RMQnssgeltdcfkdehVLLISVQNamsTLDRFL-L- 444
KRH04835     130 SSASYPTS-------NRYFMQV-WKIESLLREYVV--S-HDL-VIR--------------VMALKMFA---KFTKYY-R- 178
Q0CWP2        55 SENTGPTVhrvydiyNDLFDHLdLAINRLRNKRasw----------------------kqQILEGLEEahkKLRKYYrRt 112 Aspergillus ter...
KRG90264      52 SGSEYPTA-------NLYLLEV-WRVKQVIDNALE--D-TTF-FMR--------------EMAGSMKV---KFDKYW-G- 100
XP_012701930 449 CNCKLPTV-------GLVFFFM-DHVFELIKMCHN--S-SHQeWLK--------------NVASNMSE---TADNFIsE- 499
EES02615     450 CNCKLPTL-------GLVFFFM-DHVFELINLCHN--SnNHQqWLK--------------NIAGDMSK---RAEKFTtE- 501
2_pfamImport   1 SGSKYPTA-------NLYFHQI-WEVKKMLEIECL--N-SHH-VIA--------------SMVCQMTQ---KLEKYW-N- 49 
XP_002462317 454 STKRYPTP-------AHLFNML-WNVKQDVHYEsliycyKDDdTFS--------------KILVKMQN---KFKESW-K- 506
XP_015692325 584 SSPSSPTA-------NMYFNEI-WKIRTVLQEEAL--N-DHR-DIA--------------TMVMMMQE---AFNEYW-Q- 632
XP_015695844 211 vsspqyVF-------NSYFHVL-WSVRTTLQELST--V-RNI-ERI--------------VDVGKMQE---NFDRQR-R- 259
XP_015622740 445 --KSYLLLSIPLILDPRYKL-VYVENLLKNFq-SILknaPS--VDlvsKVGEKFREL 495
KRH04835     179 --EYYEILVIGAILNPRWKF-KVIWFAYTKI--DPStceEK--II---NLRKKIENC 225
Q0CWP2       113 yqAEGYIYAIATILDPTSKLeKFKTATWLDDd-----------TDwyqKYRTVFEKV 158 Aspergillus terreus NIH2624
KRG90264     101 --ECNMLMSIASVLDPRCKF-HVVNICFPLIykSEEiskEN--IE---KVRNSLQQL 149
XP_012701930 500 --AYSIYTFTAAILDPRIKG-ELIPETLNSAs----------------NLEDARNHF 537
EES02615     502 --AYNIYTFTAAILDPRIKG-ELIPETLNSTs----------------NLEDARNHF 539
2_pfamImport  50 --LSFLKICIPVILDPRFKL-SFLEYRLKQGleRME---ADeyLK---KIETTIREL 97 
XP_002462317 507 --ICFFHCCMPMIMDPECRL-ERIKSSVWLFgsEKN------------DVLRTLASL 548
XP_015692325 633 --NSYLWLAIPVVLDPRFKF-SFIEFRLKRAf-GTD---SAsyLS---VIRETVREL 679
XP_015695844 260 --RVYVWLSMAVVLDPRYHI-NFIEQRFRQAf-GND---AYmyIS---EVRGKLFEL 306
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