1JFI,4WZS


Conserved Protein Domain Family
HFD_DRAP1

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cd22906: HFD_DRAP1 
histone-fold domain found in Dr1-associated protein 1 (DRAP1) and similar proteins
DRAP1, also called Dr1-associated corepressor or negative cofactor 2-alpha (NC2-alpha), acts as a corepressor for Dr1 (down-regulator of transcription 1)-mediated repression of transcription. It forms a heterodimer with Dr1. The association of the Dr1/DRAP1 heterodimer with TBP results in a functional repression of both activated and basal transcription of class II genes. DRAP1 can bind to DNA on its own. It also binds TATA-binding protein-associated factor 172 (BTAF1).
Statistics
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PSSM-Id: 467031
Aligned: 67 rows
Threshold Bit Score: 74.8649
Created: 31-Aug-2020
Updated: 27-Apr-2023
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 34 residues -Click on image for an interactive view with Cn3D
Feature 1:heterodimer interface [polypeptide binding site]
Evidence:
  • Structure:1JFI; Homo sapiens NC2 alpha subunit forms a heterodimer with NC2 beta, contacts at 4A

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1         # ##  #  ### ## ## ###  # ##  ### ####  ##  #          ####  ##  #         
1JFI_A         9 NARFPPARIKKIMQTDEEIGKVAaAVPVIISRALELFLESLLKKACQVTQSrn-aKTMTTSHLKQCIELEGDPAAN 83  human
XP_001427652  13 QLKFPVSKVKKIVQENQDVGKINnVVPYVLTKSLELFLSDILSKCKETLKDrk-lNKATPGLLKIVLQESQYDFMK 87  Paramecium tetraure...
XP_005539381   9 GSRFTAGRVKRLLQTNDEVGHMAaSVPVLVGHATEHFLRDLSLQALAYAKEsg-aTTITSSLLRYTVEKEPRFQFL 83  Cyanidioschyzon mer...
KII64065       7 DTLVKPPWMKRVIQTNPEIGKMLgNVPAVVAKSFDMFFYDLMAELTAEATGg---SQITPSLIKSFVDKHDKYKFL 79  Thelohanellus kitauei
OIR57246       4 KEMLPVPRVKRIMQRDEEVGKLSfHTPFLVAKATEQFLRDLVTAAQEMALKrk-gRKIGDKDLSEAISTHERFDFL 78  Amphiamblys sp. WSB...
ORD97527      13 KTRFPISKIKKIILQNEEIGKTAsTVPVVLSKAVELFIKEVSTNVYKSLDEs--dHKITLEKLEAVLNSERYSILL 86  Hepatospora eriocheir
XP_005708587   7 SVVFPASRIKRIMRINEEVGKIAvPTPVLVSKALQLMLQDFLTSCCDTARKhk-sTVITPYLMKLCMRNYDRFAFL 81  Galdieria sulphuraria
XP_007604109  13 KTRFPLSRIKKIMQQNEDVGKAAiTVPVVLSKALEMFFEQIISKMAESAKRre-sAKIQAQDFRSVVKSNEELYSF 87  Vittaforma corneae ...
XP_001712211   9 PNVFSLSKIKMIIQSNEKIGKISyFIPPMTSKLLEIFLIDILSELIIFFKRrk-eNKIKKKHFKYLIKKFQRFKKI 83  Hemiselmis andersenii
ETW55747      96 TAKFPVMKIQKIMQLNGNVKKVNnEAINIFQKAVMMFLIELVNKTLEFKDEkntaRNITSFDILSCIQREGIKYKF 171 Plasmodium falcipar...

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