5YWR


Conserved Protein Domain Family
mRING-CH-C4HC2H_ZNRF

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cd16489: mRING-CH-C4HC2H_ZNRF 
Click on image for an interactive view with Cn3D
Modified RING-CH finger, H2 subclass (C4HC2H-type), found in the ZNRF family
The ZNRF family includes zinc/RING finger proteins ZNRF1, ZNRF2, and similar proteins. It has been characterized by containing a unique combination of zinc finger-RING finger motifs in the C-terminal region, which is evolutionarily conserved in a wide range of species, including Caenorhabditis elegans and Drosophila. ZNRF proteins function as E3 ubiquitin ligases and are highly expressed in central nervous system (CNS) and peripheral nervous system (PNS) neurons, particularly during development and in adulthood. ZNRF1 and ZNRF2 are differentially localized within the synaptic region. ZNRF1 is associated with synaptic vesicle membranes, whereas ZNRF2 is present in presynaptic plasma membranes. They are N-myrisotoylated and also located in the endosome-lysosome compartment in fibroblasts. ZNRF proteins may play a role in the establishment and maintenance of neuronal transmission and plasticity via their ubiquitin ligase activity, as well as in regulating Ca2+-dependent exocytosis. The RING fingers found in ZNRF proteins are modified as C4HC2H-type RING-CH finger, rather than the typical C4HC3-type RING-CH finger, which is a variant of the RING-H2 finger.
Statistics
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PSSM-Id: 438152
Aligned: 21 rows
Threshold Bit Score: 65.4011
Created: 2-May-2013
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
 
Zn binding site
Conserved site includes 8 residues -Click on image for an interactive view with Cn3D
Feature 1: Zn binding site [ion binding site], 8 residue positions
Conserved feature residue pattern:C C C C H C C HClick to see conserved feature residue pattern help
Evidence:
  • Structure:5YWR; Homo sapiens ZNRF1 binds two Zn2+ ions
  • Comment:modified RING-CH finger (C4HC2H-type)
  • Comment:A RING finger typically binds two zinc atoms, with its Cys and/or His side chains in a unique "cross-brace" arrangement.
  • Comment:The RING-CH fingers found in ZNRF proteins are modified as C4HC2H-type RING-CH finger, rather than the typical C4HC3-type RING-CH finger, which is a variant of RING-H2 finger.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1          #  #              # #  #  #                           #  # 
5YWR_B         45 ECVICLEELlqGDTIARLPCLCIYHKSCIDSWFev-----------------nrSCPEHP 87   human
NP_491059     144 ECSICLEDLeaGHKIARLPCLCIYHKQCIDDWFkr-----------------knCCPEHP 186  nematode
CBQ72642     1222 ECSICMEDFvaNSSIARLPCLCYFHRGCIDSWFkr-----------------grSCPVHA 1264 Sporisorium reilianum SRZ2
CBY30947       88 ECIICYEDLmaGQCIARLPCLCIFHEECLKDWFkv-----------------keECPSHP 130  Oikopleura dioica
Q06651        224 ECPICFENMepGEKVGRLECLCVFHYKCIKNWFhkraqmtaaqkgnghafvkrnFCPFHD 283  Saccharomyces cerevisiae S288c
EMR09092      180 ECIICFEEMlpGEKIARLECLCNYHVICIRQWIsitt--------------grgCCPIHM 225  Pneumocystis murina B123
EAL71253      496 ECPICLEEFtkGQNVARLECWCIFHTNCISEYLlk-----------------skKCPVHN 538  Dictyostelium discoideum AX4
CDS18479      258 ECSICLEDMkaGDRIARLPCLCIYHKKCIDNWFqr-----------------kqTCPEHP 300  Echinococcus granulosus
EAA36027      619 ECTICLEEFepGVAMARLECLCRFHRACISAWWerh----------------pgRCPMHQ 662  Neurospora crassa OR74A
XP_006012192  144 ECSICLEELvkGSLIARLPCLCIYHKSCIDSWCev-----------------kpCCPQHP 186  coelacanth

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