2LLI,2LLI,2LLI


Conserved Protein Domain Family
zf-CCHC
?
pfam00098: zf-CCHC 
Click on image for an interactive view with Cn3D
Zinc knuckle
The zinc knuckle is a zinc binding motif composed of the the following CX2CX4HX4C where X can be any amino acid. The motifs are mostly from retroviral gag proteins (nucleocapsid). Prototype structure is from HIV. Also contains members involved in eukaryotic gene regulation, such as C. elegans GLH-1. Structure is an 18-residue zinc finger.
Links
?
Statistics
?
PSSM-Id: 395050
Aligned: 79 rows
Threshold Bit Score: 22.8698
Created: 21-Mar-2022
Updated: 17-Oct-2022
Structure
?
Program:
Drawing:
Aligned Rows:
Download Cn3D
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection: 
2LLI_A  106 IYCYNCGGKGHFGDDCKE 123  Saccharomyces cerevisiae S288C
Q9BWF3  160 SGCYRCGKEGHWSKECPI 177  human
O76743  665 EPCRRCAEEGHWGYECPT 682  Caenorhabditis elegans
Q94901  168 EQCYRCGRSGHWSKECPR 185  fruit fly
P34689  262 RGCFNCGEQGHRSNECPN 279  Caenorhabditis elegans
O76743  570 RGCHNCGEEGHISKECDK 587  Caenorhabditis elegans
2LLI_A    5 PKCNNCSQRGHLKKDCPH 22   Saccharomyces cerevisiae S288C
P40507  112 IICTNCNANGHYKSQCPH 129  Saccharomyces cerevisiae S288C
2LLI_A   43 IQCSKCDEVGHYRSQCPH 60   Saccharomyces cerevisiae S288C
Q6ZN17  149 KKCHYCQSIMHMVANCPH 166  human
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap