Conserved Protein Domain Family
F-box_CeFBXA-like

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cd22150: F-box_CeFBXA-like 
F-box domain found in Caenorhabditis elegans F-box domain-containing proteins (CeFBXA) and similar proteins
The family includes a group of uncharacterized Caenorhabditis elegans F-box domain-containing proteins. They may be components of SCF (SKP1-CUL1-F-box protein) E3 ubiquitin-protein ligase complexes which mediate the ubiquitination and subsequent proteasomal degradation of target proteins. The F-box domain has a role in mediating protein-protein interactions in a variety of contexts, such as polyubiquitination, transcription elongation, centromere binding and translational repression.
Statistics
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PSSM-Id: 438921
Aligned: 41 rows
Threshold Bit Score: 41.3184
Created: 11-Jun-2020
Updated: 17-Oct-2022
Structure
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Aligned Rows:
Conserved Features/SitesClick to see Conserved Features Help
 
putative Skp1
Feature 1:putative Skp1 binding site [polypeptide binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1           #    #  ##  ##       # ##   ### #               
Q9XX81        10 LSGMPl-DIINRILDKLd----PILRFSLRRVCRNLRNVIDnrdPEIEQVH 55  Caenorhabditis elegans
O45652       115 LSDMPi-KILATISDYLe----TKDRMNLRKVSRSLQDFVDyqgSGINSLE 160 Caenorhabditis elegans
NP_507388    261 LSAMPi-DIVGEIMNKLk----LEEKLLMRKVSKSLRGFMDklnIGVEKIS 306 Caenorhabditis elegans
PIC11505      75 LVDLPv-SIFGKIAKTVg----FGHRFVLREVCKSIKNAVDqvyPTFDSIC 120 Caenorhabditis nigoni
NP_507573    122 LSTMPv-EIVRKILMEIe----PIERFPFRRVCSVFRNAIDsldWNFKTIT 167 Caenorhabditis elegans
PIC29616      78 LTDMPv-HIFGKILENLgddyqFKYRFTLRNVCKSFRAIADswnPNIKKFS 127 Caenorhabditis nigoni
XP_003100516  74 LFDLPs-EILGLIVGELd----IKDRMRTRKVCHLLRDTVDrqpIVINDCA 119 Caenorhabditis remanei
XP_003108317  13 LGELPi-IFLEKVLDRLd----LISQLNLRKVSHDLRKVVDsrkSPIEKIW 58  Caenorhabditis remanei
EGT60137       4 LLDMPi-DIIEKILKKLe----HGERATFRNVSKACRQTFDsinYTFETVE 49  Caenorhabditis brenneri
XP_003116016  74 FTDLLvpKIVEKLIENVe----LNERMTLRNVCKTFRNVIDnsaQYFKTIS 120 Caenorhabditis remanei

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