1T2K,1T2K,2WT7,1GD2,1YSA,1DH3,1CI6,1NWQ,1FOS,2C9L,2C9L,4EOT,4EOT


Conserved Protein Domain Family
bZIP

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cd14686: bZIP 
Click on image for an interactive view with Cn3D
Basic leucine zipper (bZIP) domain of bZIP transcription factors: a DNA-binding and dimerization domain
Basic leucine zipper (bZIP) factors comprise one of the most important classes of enhancer-type transcription factors. They act in networks of homo and heterodimers in the regulation of a diverse set of cellular processes including cell survival, learning and memory, lipid metabolism, and cancer progression, among others. They also play important roles in responses to stimuli or stress signals such as cytokines, genotoxic agents, or physiological stresses. The bZIP structural motif contains a basic region and a leucine zipper, composed of alpha helices with leucine residues 7 amino acids apart, which stabilize dimerization with a parallel leucine zipper domain. Dimerization of leucine zippers creates a pair of the adjacent basic regions that bind DNA and undergo conformational change. Dimerization occurs in a specific and predictable manner resulting in hundreds of dimers having unique effects on transcription.
Links
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Statistics
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PSSM-Id: 269834
Aligned: 372 rows
Threshold Bit Score: 26.3541
Created: 13-Jun-2013
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 14 residues -Click on image for an interactive view with Cn3D
Feature 1:DNA binding site [nucleic acid binding site]
Evidence:
  • Structure:1T2K: Human ATF-2/AP-1 dimer binds DNA; contacts at 4A.
  • Structure:1GD2: Schizosaccharomyces pombe PAP1 bZIP domain dimer binds DNA; contacts at 4A.
  • Structure:1DH3: Mus musculus CREB bZIP domain dimer binds DNA; contacts at 4A.
  • Structure:2C9L: Human Epstein-Barr virus (EBV) immediate-early transcription factor ZEBRA bZIP domain homodimer bound to DNA, contacts at 4A
  • Structure:4EOT: Mus musculus MafA bZIP domain homodimer binds DNA, contacts at 4A

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1           ## ### ###### ###                                
1T2K_D         2 RRKFLERNRAAASRSRQKRKVWVQSLEKKAEDLSSLNGQLQSEVTLLRNEVA 53  human
CBN74737      89 KLMDRERNRRQARKSRKLKKQCADKMQQQLNQLEKESAEAVAREKEAAKKLK 140 Ectocarpus siliculosus
EOR00596     124 KLQQRERNKQAASRFRIRQQYKTESLQMENDWLKRERVRLQRENLALKDENR 175 Wallemia ichthyophaga EXF-994
F1QW76        30 KVMRREKNRIAAQKSRMRQTQKADSLHLESESLEKENAALRKEVKRLTEEAK 81  zebrafish
EDS43792     260 KTEKHERWKAAAKRYRTRLKQNQDMIAQRNAALEEENARLKAEVVRLRNLLQ 311 southern house mosquito
CBY18937      64 REVKRARNREAAKRVRQRRVQKVADLEKQLDQAKKELDSEKIANEKLRKQLE 115 Oikopleura dioica
EFW43198     183 KVKRREQIKRASKLYRERKKRSERQLEDELDRLRKEKDELFAEKERALLQLR 234 Capsaspora owczarzaki ATCC 30864
EGD80653     341 KRLRREKNRIAAAACRQRKVQKEAHLSKLLDGLKSEHAELAASAAALESQLL 392 Salpingoeca sp. ATCC50818
AFR92452      17 KAKELKKNKEARQKARETQTVKKDTRELETEIRSLKAENNPANKKKIQELES 68  Cryptococcus neoformans var. grubii H99
NP_001021161 394 RNTILERNKAAAVRYRKRKKEEHDDMMGRVQAMEAEKNQLLAIQTQNQVLRR 445 Caenorhabditis elegans

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