5A6R,5FTA,4CRH,5A15,5BXH,5BXB,4YY8


Conserved Protein Domain Family
BTB_POZ_KCTD-like

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cd18316: BTB_POZ_KCTD-like 
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BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in potassium channel tetramerization domain-containing proteins
The potassium channel tetramerization domain (KCTD) family proteins contain the BTB/POZ domain, also known as tetramerization (T1) domain, which is a versatile protein-protein interaction motif that facilitates homodimerization or heterodimerization. KCTD proteins play crucial roles in a variety of fundamental biological processes, such as protein ubiquitination and degradation, suppression of proliferation or transcription, cytoskeleton regulation, tetramerization and gating of ion channels and others. Some KCTD proteins are involved in protein ubiquitination as part of the CRL (Cullin RING Ligase) E3 ligases. Some others show Cullin-independent functions including binding and regulation of GABA (gamma-aminobutyric acid) receptors (KCTD8, KCTD12 and KCTD16) and inhibition of AP-2 function (KCTD15). KCTD family BTB domains can adopt a wide range of oligomerization geometries, including homodimerization, tetramerization, and pentamerization.
Statistics
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PSSM-Id: 349625
Aligned: 87 rows
Threshold Bit Score: 67.5827
Created: 12-Sep-2017
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
5A6R_A        37 VRLNVGGTVFLTtRQTLCRe-QKSFLSRLCqgeelq----------sdrdeTGAYLIDRDPTYFGPILNFLRHgklvl-- 103 human
Q03900        29 YKIQVGKSLFKIsGASLSSd-GPSFFTEYFskkrspsnnddsnndtmesnkNEVLFIDRSAEVFEWIYQHLQGyiiei-- 105 Saccharomyces c...
EKG06078     124 IKLNIGGMRFHVqRATLLQf-SMTIFHLLEderfn-----------aqkdeFGHIFFDRDPWLFRELLFLLRErqqriie 191 Trypanosoma cruzi
EZF99888      24 FPIQIGSQLFRLsGASIASd-APSYFSRFFeeqles----------npdgnVRTLYIDRDPETFHEILRHLQGyyvrp-- 90  Trichophyton ru...
OAQ31511     116 MFINVSGTIFKVsRETILNd-SPNFFALLEpfs---------------drnLTPTYFCRSPDLFKDILSHLQGyeipi-- 177 Mortierella elo...
CDS09761     138 YVLVVGGRPFRLsWESLKSdgPNNFFTNFFrkr----------------ktTRVMHIDRDPDIFALIVHHLRGyhirp-- 199 Lichtheimia ramosa
XP_003722662 146 VSLNVGGERFTVpLSTLLSkdAPNYFHILLgseetgwv------apvfkdeHDTIFIDRDPSCFKYIVDYLRGyhyfnl- 218 Leishmania majo...
OMJ68524       7 LNIDVGGTRFKVlRETVMKh-PDSLLAQVItgrdty----------hmlitDGTYFFDRNPQYFSVILDYMRMgkvfl-- 73  Stentor coeruleus
KYQ90646     258 INFNVGGTLFATsLRTISTy-PQSLLFKVVelqid------------lvlkDEVIFIDRNPIYFPSILDFMRSgkycapi 324 Dictyostelium l...
NP_013209     28 FKIRIGQKLFEIsGATLNSd-APNFFTQFFnth----------------dkNTILFVDRSEDVFIIIYRHLQGyfpdi-- 88  Saccharomyces c...
5A6R_A       104 --------------------dkdmaEEGVLEEAEFY 119 human
Q03900       106 --------------------kdevqYTMLFADAMYY 121 Saccharomyces cerevisiae S288c
EKG06078     192 agqfgsgplpggteynrlaqlplteWRRLMDEAKYY 227 Trypanosoma cruzi
EZF99888      91 --------------------kdgahFVKLFADAQFY 106 Trichophyton rubrum MR1459
OAQ31511     178 --------------------rdkihRMNLLKEARYF 193 Mortierella elongata AG-77
CDS09761     200 --------------------rddvqNQALVCDAEYY 215 Lichtheimia ramosa
XP_003722662 219 --------------------lkedsLRRLKVDAAYY 234 Leishmania major strain Friedlin
OMJ68524      74 --------------------pptllKEQLNEELQFW 89  Stentor coeruleus
KYQ90646     325 k-----------------stsssinQKGLIMESEFF 343 Dictyostelium lacteum
NP_013209     89 --------------------knevqFTCLFADALYF 104 Saccharomyces cerevisiae S288c
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