Conserved Protein Domain Family
7tmA_OR5AR1-like

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cd15944: 7tmA_OR5AR1-like 
olfactory receptor subfamily 5AR1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors
This group includes human olfactory receptor subfamily 5AR1 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.
Statistics
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PSSM-Id: 320610
Aligned: 6 rows
Threshold Bit Score: 450.776
Created: 12-Dec-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
  next features
Feature 1:putative ligand binding pocket [chemical binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                             #  ##      
Q8NGP9        12 FIFMGITQDPQMEIIFFVVFLIVYLVNVVGNIGMIILITTDTQLHTPMYFFLCNLSFVDLGYSSAIAPRMLADFLTNHKV 91  human
XP_006117009  12 FILLGFTQEPQTQDILFVVFLLIYLTNVVGNLGMIFMITVDSQLHTPMYFFLCNLSFCDFGYSSAIAPKMLVGFLHGRQA 91  Chinese soft-sh...
XP_006032299  12 FVFLGFTDDPQLQLVLFVVFLVIYLINLLGNLGMIFLIIFDSQLHTPMYFFLSHLSLVDLGYSTAIAPRMLSDFLHQHKV 91  Chinese alligator
XP_006032305  12 FFLLGITDDPQMQVIFFVVFLSIYLVNVIGNLGMIILISHDHRLHTPMYVFLWHLSFCDLCYSSAIAPRMLADFLSKERA 91  Chinese alligator
XP_006263106  12 FILLGFTEDPYTQTILFIVFLVIYLVNVVGNLGMILMITTDSQLHTPMYKFLRHLSFCDLCYSTTTVPKLLAGFVSQRQT 91  American alligator
EHH62914      12 FIFMGITQDPQMQIIFFVVFLIVYLVNVVGNVGVIIPIITDTQLHTPMYFFLCNLSFVDLGYSSAIAPRMLADFLTKHKV 91  crab-eating mac...
Feature 1             ###### ##  #                                            # #####            
Q8NGP9        92 ISFSSCATQFAFFVGFVDAECYVLAAMAYGRFVAICRPLHYSTFMSKQVCLALMLGSYLAGLVSLVAHTTLTFSLSYCGS 171 human
XP_006117009  92 ISFAGCTMQFLFFGVFMNTGFYTLAAMAYDRYVAICNPLLYSTTMCRRVCVQLVVASYLASAVNILINTGATFSINFCSS 171 Chinese soft-sh...
XP_006032299  92 ISFAGCATQFAFFVGFVDAECYVLASMAYDRYVAICRPLHYATLMSKRVCGVLVAGSYLAGLVSLAAHTSLTFSLSYCGS 171 Chinese alligator
XP_006032305  92 ISFSGCSAQFYFFAAFVDTECYVLAVMAYDRCVAICNPLLYSSAMSKKLCIQLLAGSYIAGMTNAVIHTTATFSLNFCGS 171 Chinese alligator
XP_006263106  92 IPFSGCAAQFFFFAVFVTASIYILAAMAYDRYVVICNPLLYSMKMSNRVCAQLIAACYSASCVNAIIHTGATFSLSFCSS 171 American alligator
EHH62914      92 ISFSSCATQFAFFVGFVDAECYVLAAMAYDRFVAICQPLHYSTLMSKQVCLALMLGSYLAGLVSLVSHTTLTFSLSYCGS 171 crab-eating mac...
Feature 1                               #  ### ### ##                                            
Q8NGP9       172 nIINHFFCEIPPLLALSCSDTYISEILLFSLCGFIEFSTILIIFISYTFILVAIIRMRSAEGRLKAFSTCGSHLTGITLF 251 human
XP_006117009 172 nVINHFFCDVPPLLAISCSDTHVNELLLYFFAGLAEMSSLSIILVSYVFILVAILRMRSAEGRHKAFLTCASHFTGVSLL 251 Chinese soft-sh...
XP_006032299 172 nIINHFFCEIPPLLALSCSDTYVSEILLFSLCGFIEFSTILIILISYLFIFDSILRIRSAAGRKKAFSTCASHLIGVTLF 251 Chinese alligator
XP_006032305 172 nIVNHFFCDVPPLLSLSCSDTHINEILLFAFAGFVEMSSLSVILISYLFILSAILRTRSAEGRHKAFSTCGSHFAGVTLF 251 Chinese alligator
XP_006263106 172 -KVNHFFCDMPAVLALSCFDTHINEILLYVFGSFVEIISLSIIFTSYLLIMIAILRIRSAQGRRKAFLTCASHFTGVTLL 250 American alligator
EHH62914     172 rEINHFFCEVPALLKLSCTDTSAYETAMYVCCIMMLLIPFSVISASYTRILMTVYRMSEAEGRRKAVATCSSHMVVVGLF 251 crab-eating mac...
Feature 1        #  ## ##  #     ## ###  #  ##                         
Q8NGP9       252 YGTVMFMYLRPTSSYSLDQDKWASVFYTVIIPMLNPLIYSLRNKDVKAAFKKLI 305 human
XP_006117009 252 FGTIIFMYLRPTSVYSLDQDKWASVFYTVVIPMLNPLIYSLRKKDVKEAFRKIM 305 Chinese soft-shelled turtle
XP_006032299 252 YGTVMFMYLRPTSSYSLDQDKWASVFYTVVIPMLNPLIYSLRNKDVKAAFKKLI 305 Chinese alligator
XP_006032305 252 YGTVIFMYLRPTSVYSLDQDKWASVFYTVVIPMMNPLIYSLRNKDVKEAFKKLI 305 Chinese alligator
XP_006263106 251 FGTIIFMYMRPTSTYSFDQDKWASVFYTIVIPMLNPLIYSLRNKNVKDAFRKIF 304 American alligator
EHH62914     252 YGAAMYTYVLPHSYHTPEQDKAVSAFYTILTPMLNPLIYSLRNKDVTGALQKVV 305 crab-eating macaque

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