2CT2,5FEY


Conserved Protein Domain Family
RING-HC_TRIM32_C-VII

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cd16587: RING-HC_TRIM32_C-VII 
Click on image for an interactive view with Cn3D
RING finger, HC subclass, found in tripartite motif-containing protein 32 (TRIM32) and similar proteins
TRIM32, also known as 72 kDa Tat-interacting protein, zinc finger protein HT2A, or BBS11, is an E3 ubiquitin-protein ligase that promotes degradation of several targets, including actin, PIASgamma, Abl interactor 2, dysbindin, X-linked inhibitor of apoptosis (XIAP), p73 transcription factor, thin filaments and Z-bands during fasting. It plays important roles in neuronal differentiation of neural progenitor cells, as well as in controlling cell fate in skeletal muscle progenitor cells. It reduces PI3K-Akt-FoxO signaling in muscle atrophy by promoting plakoglobin-PI3K dissociation. It also functions as a pluripotency-reprogramming roadblock that facilitates cellular transition towards differentiation by modulating the levels of Oct4 and cMyc. Moreover, TRIM32 is an intrinsic influenza A virus (IAV) restriction factor which senses and targets the polymerase basic protein 1 (PB1) for ubiquitination and protein degradation. It also plays a significant role in mediating the biological activity of the HIV-1 Tat protein in vivo, binds specifically to the activation domain of HIV-1 Tat, and can also interact with the HIV-2 and EIAV Tat proteins in vivo. Furthermore, TRIM32 regulates myoblast proliferation by controlling turnover of NDRG2 (N-myc downstream-regulated gene). It negatively regulates tumor suppressor p53 to promote tumorigenesis. It also facilitates degradation of MYCN on spindle poles and induces asymmetric cell division in human neuroblastoma cells. In addition, TRIM32 plays important roles in regulation of hyperactivities and positively regulates the development of anxiety and depression disorders induced by chronic stress. It also plays a role in regeneration by affecting satellite cell cycle progression via modulation of the SUMO ligase PIASy (PIAS4). Defects in TRIM32 leads to limb-girdle muscular dystrophy type 2H (LGMD2H), sarcotubular myopathies (STM) and Bardet-Biedl syndrome. TRIM32 belongs to the C-VII subclass of the TRIM (tripartite motif)-NHL family that is defined by their N-terminal RBCC (RING, Bbox, and coiled coil) domains, including three consecutive zinc-binding domains, a C3HC4-type RING-HC finger, Bbox1 and Bbox2, and a coiled coil domain, as well as a NHL (named after proteins NCL-1, HT2A and Lin-41 that contain repeats folded into a six-bladed beta propeller) repeat domain positioned C-terminal to the RBCC domain. The NHL domain mediates the interaction with Argonaute proteins and consequently allows TRIM32 to modulate the activity of certain miRNAs.
Statistics
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PSSM-Id: 438249
Aligned: 13 rows
Threshold Bit Score: 73.5904
Created: 2-May-2013
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
 
Zn binding site
Conserved site includes 8 residues -Click on image for an interactive view with Cn3D
Feature 1: Zn binding site [ion binding site], 8 residue positions
Conserved feature residue pattern:C C C H C C C CClick to see conserved feature residue pattern help
Evidence:
  • Comment:based on the structures of other RING-HC fingers with bound zinc
  • Comment:C3HC4-type RING-HC finger consensus motif: C-X2-C-X(9-39)-C-X(1-3)-H-X(2-3)-C-X2-C-X(4-48)-C-X2-C, where X is any amino acid and the number of X residues varies in different fingers
  • Comment:A RING finger typically binds two zinc atoms, with its Cys and/or His side chains in a unique "cross-brace" arrangement.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1           #  #               # #  #  #                         #  #   
2CT2_A         16 LECPICMESFTEEqlRPKLLHCGHTICRQCLEKLlas------------siNGVRCPFCSKI 65   human
EMP38100       16 LECPICMESFTEDqlRPKLLHCGHTICKQCLEKLlan------------siNGIRCPFCSKV 65   green seaturtle
NP_001107066   16 LECPICLETYNQDqlRPKLLQCGHSVCRQCLEKLlas------------tiNGVRCPFCSKV 65   zebrafish
NP_001096393   16 LECPICMEAYTEEllRPKLLQCGHTTCTQCLEKLlas------------niNGVRCPFCSRV 65   western clawed frog
XP_006011965   16 TECPICMETFNDTqlRPKLLQCGHTICQQCLEKLiat------------tiNGIRCPFCSKI 65   coelacanth
Q13049         18 LECPICMESFTEEqlRPKLLHCGHTICRQCLEKLlas------------siNGVRCPFCSKI 67   human
EFJ13262        1 LECPVCLEFFNDGshTPRLLCCGHTVCQLCVERLvvs-----------sslPRFRCPECRAL 51   Selaginella moellendorffii
5FEY_A         13 LECPICMESFTEEqlRPKLLHCGHTICRQCLEKLlas------------siNGVRCPFCSKI 62   human
XP_024395337   21 PDCPVCWDGFDDGprMPRLLHCGHTICQVCLQQLlfes---------glgqRCVRCPECRGV 73   Physcomitrium patens
NP_740796      17 PSCRICLEPFDEGqhLPKILQCAHTVCERCIGLLdeqsrinhnrppidrsfVHIRCPVCRAV 78   Caenorhabditis elegans
NP_001185058    4 PECPVCLQSYDGEstVPRVLACGHTACEECLTNLpkk------------fpDTIRCPACTVL 53   thale cress
NP_491267      13 VTCLICIREFDTKtrKPKVLHCGHTVCEECTDNLrdfn----------aplLVVRCPTCRQF 64   Caenorhabditis elegans
NP_491266     114 LSCGICYDPFNTGkrIPKVFPCGHTICLQCIKKLlntrt--------flggNTVICPSCRQN 167  Caenorhabditis elegans

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