1KY2,1Z0A,1Z0F,2FU5,3BFK,1YU9,2G6B,1TU3,2IL1,3RAB,1VG0,1S8F,3BC1,3BBP


Conserved Protein Domain Family
RAB

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smart00175: RAB 
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Rab subfamily of small GTPases
Rab GTPases are implicated in vesicle trafficking.
Statistics
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PSSM-Id: 197555
Aligned: 61 rows
Threshold Bit Score: 226.235
Created: 12-Jul-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1KY2_A         9 LKVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTVdGDKVATMQVWDTAGQERFQSLGVAFYRGADCCVLV 88  baker's yeast
EDL36448      12 FRLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTIEV-DGIKVRIQIWDTAGQERYQTITKQYYRRAQGIFLV 90  house mouse
XP_002642883  12 LKILIIGESGVGKSSLMLRFVDDVFDPEQAATIGVDFRVTSMTI-DGNRVKLAIWDTAGQERFRTLTPSYYRGAQGVICV 90  Caenorhabditis ...
XP_002959134  10 FKVLLVGDSGVGKSCILTRFTSGIFEESTTSTIGVDFKVKYLTA-DGKRCKLTIWDTAGQERFRTLTSSYYRGAQGIIFV 88  Volvox carteri ...
CAA98163      12 FKILLIGDSGVGKSSLLVSFISSSVEDQS-PTIGVDFKIKMLTV-GGKRLKLTLWDTAGQERFRTLTSSYYRGAQGIILV 89  Lotus japonicus
CAA98164      12 FKLLMIGDSGVGKSSLLLSFTSDEFQDMS-PTIGVDFKVKYVAI-GGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMV 89  Lotus japonicus
Q05976        10 lkiliiGESGVGKSSLLLRFTEDTFDPEQAATIGVDFKVKTLTV-EGNKTKLAIWDTAGQERFRTLTPSYYRGAQGVILV 88  great pond snail
NP_001027004  15 LKFLLVGDRDVGKSEILESLQDGTAESPYSHLGGIDYKTTTILL-DGQRVKLKLWDTSGQGRFCTIFRSYSRGAQGVILV 93  human
BAA21710       6 IKLLVIGESGVGKSSLIRRFVENKFDQNHDVTIGMDFKSKVMQV-DGIDYKVALWDTAGAERFRSLTASFYRKALGAILV 84  fruit fly
2IL1_A        27 LQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVEL-RGKKIRLQIWDTAGQERFNSITSAYYRSAKGIILV 105 human
1KY2_A        89 YDVTNASSFENIK-S-WRDEFLVHA-N-VnspeTFPFVILGNKIDAEEsKKIVSEKSAQELaKSL-GDIPLFLTSAKNAI 163 baker's yeast
EDL36448      91 YDISSERSYQHIM-K-WVSDVDEYA-P-E----GVQKILIGNKADEEQ-KRQVGREQGQQL-AKE-YGMDFYETSACTNL 159 house mouse
XP_002642883  91 YDVTSRSSFEKLK-H-WMTEVDTYCtN-D----NVIKMMVANKIDMPN--RTVTREEGLKF-AKR-HRTLFIEASAKTKE 159 Caenorhabditis ...
XP_002959134  89 YDVTRRDTFESLEaN-WMREFDIYS-TvE----SAIKMVVANKVDLSA-QRQVSSEEGHDF-ARR-HGCLFVETSARANL 159 Volvox carteri ...
CAA98163      90 YDVTKRETFTNLS-EvWSKELELYS-N-Nq---DCVKMLVGNKVDRDA-ARAVSREEGLAL-AKE-LGCLLIECSAKTRE 160 Lotus japonicus
CAA98164      90 YDVTRRDTFTNLS-EiWAKEIDLYStN-Q----DCIKMLVGNKVDKES-DRVVSKKEGIDF-ARE-YGCLFIECSAKTRV 160 Lotus japonicus
Q05976        89 YDVSSKQSFNKLD-A-WLNELETFS-T-Kh---DMVKMLVGNKIDRAN--HEVTKDEGLKF-ARK-HHMLFIEASAKTND 157 great pond snail
NP_001027004  94 YDIANRWSFEGMD-R-WIKKIEEHA---P----GVPKILVGNRLHLAF-KRQVPREQAQAY-AER-LGVTFFEVSPLCNF 161 human
BAA21710      85 YDITSRDSLVKLE-T-WLAELDSYS-DnP----NIAIIVVGNKIDEE---RVVDREEGRKF-ARK-HRALFIETSAKCDQ 152 fruit fly
2IL1_A       106 YDITKKETFDDLP-K-WMKMIDKYA-S-E----DAELLLVGNKLDCET-DREITRQQGEKF-AQQiTGMRFCEASAKDNF 175 human
1KY2_A       164 NVDTAFEEIARSALQQ 179 baker's yeast
EDL36448     160 NIKESFTRLTELVLQa 175 house mouse
XP_002642883 160 GVQCTFEELIEKIIQT 175 Caenorhabditis briggsae
XP_002959134 160 AVGQAFEELLLKILDT 175 Volvox carteri f. nagariensis
CAA98163     161 NVEQCFEELALKIMea 176 Lotus japonicus
CAA98164     161 NVQQCFEELVLKILDT 176 Lotus japonicus
Q05976       158 GVQCAFEELVEKIIQT 173 great pond snail
NP_001027004 162 NIIESFTELARIVLLR 177 human
BAA21710     153 FVSDVFKDVVEKIVSs 168 fruit fly
2IL1_A       176 NVDEIFLKLVDDILKK 191 human
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