Conserved Protein Domain Family
CCDC50_N

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pfam15295: CCDC50_N 
Coiled-coil domain-containing protein 50 N-terminus
Statistics
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PSSM-Id: 464621
Aligned: 10 rows
Threshold Bit Score: 104.808
Created: 26-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_967502      5 KVRDNEALPkgRVTEVCQEWMVREDGALAYRLQNQEITEHLSGNKYRNALVREDFPRAKSEQLREQqlaEQTALIYQRML 84 
XP_015785762   4 AGLTEEDIPegKVNQVCREWLVREDNAIAYRLQDEEINQFYEGNRYKNQVFRSDLEQARYIHENEE---FERMMEFEREK 80 
XP_002120528   7 SSIEQEPVR--PVTEAVQEYRVIEDGALAYHLQEREIEHHYACNVENRRTVMQDIRTAQQLQDEED---RRARIFTLEQQ 81 
OCA34927      13 ISIDQSKLP--GVKEVCRDFAVLEDHSLAHNLQEQEIEHHLATNIQRNRLVKTDLQVAKQLQEQED---LRAQTRIKNRH 87 
NP_001026486   4 IGIDQSKLP--GVKEVCRDFAVLEDHTLAHNLQEQEIEHHLATNIQRNRLVQHDLQVAKQLQEEED---LKARAQIQKRQ 78 
XP_690155      4 TDIDKSHLP--GVYDVCQCFSVLEDGALAQSLQEQEIEHFYSTNIQKNQTVQNDVRLARRLQEEEE---------ERANL 72 
XP_005162350   4 LEVDQSNLP--RVQEVCQCFAVLEDGALAHNLQEQEIEQYYSSNVERSQLVQRDIRVAKRLQDEEQ---QRVQTPQHQTT 78 
2_pfamImport   1 VEIDQSNLP--RVQEVRQCFAVLEDGALAHNLQEQEIEQYYTTNIHKNQLVQNDIRVAKRLQDEEEeeqAQQSTLHRQSS 78 
XP_007467866   4 VSIDQSKLP--GVKEVCRDFAVLEDHTLAHSLQEQEIEHHLASNVQRNRLVQHDLQVAKQLQE-ED---LKAQAQLQKRY 77  Yangtze River d...
XP_027870970   4 LEIDQSNLP--RVQEVCQNFAVLEDGVLAHSLQEQEIEQYYTTNIQKNQLVQNDIRVARRLQQEEEqqrAQQSALLKQVS 81  Monterrey platy...
XP_967502     85 AEQEEQDNQVAKQLAEELERe---ERQKRRFIEIQDQNVARQLLHRERVSVERHA 136
XP_015785762  81 QRLADEDERIAKEIQEALLEeerrKAEELNIIAEEDEKLALRLQEKEKERLKRKK 135
XP_002120528  82 AQLEKTDEKLAEAYQEKLLKkhlqKEQERKEREERDNEIAFMLMERERRRERRQQ 136
OCA34927      88 SELEVLDSEIAQEIQDRLVI----EAERRRQQEEKDEDIARLLQERE---ERRRK 135
NP_001026486  79 KDLERQDSEIAQEIQVKLVF----EAEQRRRQEEKDEDIARLLQQKELQEEKKRK 129
XP_690155     73 QQIEEEDCRYALMIQQQLQR----CAEEARRQEKQDEEIAKQLQEEEEMEMRRQR 123
XP_005162350  79 RQLEERDSEYARMIQEEIQR----CAEEARRREVEDEEIAKRIQEEELCLRHRSS 129
2_pfamImport  79 REME--DFEYARVVQEEIQR----CAEEARRREQEDKEIAKQMQEEEKERITRIS 127
XP_007467866  78 KDLEQQDCEIAQEIQEKLAI----EAERRRIQEKKDEDIARLLQEKELQEEKKRK 128 Yangtze River dolphin
XP_027870970  82 RQMEEQDFEYARVIQEELQR----RAEEVHRREQDDEEIAKQLQEEEEQQVRRRS 132 Monterrey platyfish
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