Conserved Protein Domain Family
7tmA_OR5C1-like

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cd15945: 7tmA_OR5C1-like 
olfactory receptor subfamily 5C1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors
This group includes human olfactory receptor subfamily 5C1 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.
Statistics
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PSSM-Id: 320611
Aligned: 8 rows
Threshold Bit Score: 419.534
Created: 12-Dec-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
  next features
Feature 1:putative ligand binding pocket [chemical binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                             #  ##      
Q8NGR4        16 FVLLGITNRWDLRVALFLTCLPVYLVSLLGNMGMALLIRMDARLHTPMYFFLANLSLLDACYSSAIGPKMLVDLLLPRAT 95  human
EOA93600      14 FILLGFSDHLEVELPLFGLFLLIYITTLVGNAGIIVLVWLNACLHSPMYYFLSNLSFLDLSYSSAIAPKMLLNLLAQRKT 93  mallard
ELK03408      12 FLLVGFTDYLPLGITLFLVFFIAYILTVVGNVGLIILVNIDSNLQTPMYYLLSNLSFLDICYSTSITPKMLVNFLTTRKS 91  black flying fox
XP_007438368  13 FILLGFTSQRSLQLLLFSFFLPIYLLSVAGNLGLVILIRVERALHTPMYYFLSHLALMDLCSCCTVAPKMLLGLLKGYDT 92  Burmese python
Q8N127        12 FLFVGFTDYLPLRVTLFLVFLLVYTLTMVGNILLIILVNINSSLQIPMYYFLSNLSFLDISCSTAITPKMLANFLASRKS 91  Western lowland...
NP_001000660  12 FILVGITNDPSMKVVLFVAFLLIYLIILVANIGMIVLIKLDSQLRTPMYFFLCHLSFSDICYSTAVGPKMLVDLLTKCKS 91  Norway rat
NP_001000663  12 FFLLGITSNYDMKIVLFMVFLLVYLSILLENVGMITLIRMDSQLHTPMYFFLSHLSFSDLCYSTAVGPRMLVDLVAKKHS 91  Norway rat
Q8NH69        12 FFLLGITNNPEMKVTLFAVFLAVYIINFSANLGMIVLIRMDYQLHTPMYFFLSHLSFCDLCYSTATGPKMLVDLLAKNKS 91  human
Feature 1             ###### ##  #                                            # #####            
Q8NGR4        96 IPYTACALQMFVFAGLADTECCLLAAMAYDRYVAIRNPLLYTTAMSQRLCLALLGASGLGGAVSAFVHTTLTFRLSFCRS 175 human
EOA93600      94 ISFFGCATQMFLFAALADAECLILAVMAYDRYVAICHPLLYTITMSRQACAFMVAGAYLSGVLTSLVHTSFVFTLSFCGS 173 mallard
ELK03408      92 ISPYGCALQMIFFCCFADAECLILAAMSYDRYAAICYPLLYPTLMSRRVCIYFIVSAYFSGSRTSMVHVCLTFRLPFCGS 171 black flying fox
XP_007438368  93 IPIPACALQMFFFAAASDAECCLLAVMAYDRYVAICRPLHYGTAMPPHLCHLLVVASYVAGMASGVIHSSMAFRLPFCCA 172 Burmese python
Q8N127        92 ISPYGCALQMFFFASFADAECLILAAMAYDRYAAICNPLLYTTLMSRRVCVCFIVLAYFSGSTTSLVHVCLTFRLSFCGS 171 Western lowland...
NP_001000660  92 ISFGGCALQFFFTCIFIDAECVLLAVMAFDRYKAISNPLIYAVDMSSRFCYQLLAGVYILAMIDTLMHTIMTFELCFCRS 171 Norway rat
NP_001000663  92 IPFIGCFLQLLFVCVFIDVECMLLAVMAFDRYKAISNPLLYAVDMSTKVCYQFLTLIYMASAADGLIHTTLAFSLCFCGS 171 Norway rat
Q8NH69        92 IPFYGCALQFLVFCIFADSECLLLSVMAFDRYKAIINPLLYTVNMSSRVCYLLLTGVYLVGIADALIHMTLAFRLCFCGS 171 human
Feature 1                                   #  ### ### ##                                        
Q8NGR4       176 RKINSF-FCDIPPLLAISCSDTs---LNELLLFAICGFIQTATVLAITVSYGFIAGAVihmrsvEGSRRAASTGGSHLTA 251 human
EOA93600     174 NTINHF-FCDIPPLLELSCSKTh---INEVLLFTLCGFIQTSTFLIIIISYACILGTIlqfhatESRHKAFSTCTSHLMA 249 mallard
ELK03408     172 NIINHFiFSVIFHLFWRADTHInellLFALCSLALMHIKMRYTFCIIMISYIRIIIAIqrirsaEGRRKAFSTCASHLTT 251 black flying fox
XP_007438368 173 NTLDHF-FCDIPPVLALACADTq---INQLLLLVVCGTIQSITLMAIITSYGLILCTVg----rTRTWRAMSTCGSHLTA 244 Burmese python
Q8N127       172 NIVNHF-FCDIPPLLALSCTDTq---INQLLLFALCSFIQTSTFVVIFISYFCILITVlsikssGGRSKTFSTCASHLIA 247 Western lowland...
NP_001000660 172 NKINHF-FCDLPPILLLSCSDIy---VNELAMFVFSGFVELCTISGLLVSYCYIITSVlkissdEGRFKAFSTCASHLTA 247 Norway rat
NP_001000663 172 TEINHF-FCDLPPLYLLSCSDTq---TNELVVFTLFGFIELSTILSVLVSYCYIISSVlkisssGGRFKAFSTCASHLTA 247 Norway rat
Q8NH69       172 NEINHF-FCDIPPLLLLSRSDTq---VNELVLFTVFGFIELSTISGVFISYCYIILSVleihsaEGRFKALSTCTSHLSA 247 human
Feature 1            #  ## ##  #     ## ###  #  ##                       
Q8NGR4       252 VAMMYGTLIFMYLRPSSSYALDTDKMASVFYTLVIPSLNPLIYSLRNKEVKEALRQ 307 human
EOA93600     250 VGLFYGSLFFTYLRPSSSYSPDTDKIIAVFYTVVFPMLNPMIYSLRNKEVMEALRR 305 mallard
ELK03408     252 VTLFYGSVTFSYMQPSSRYSLEQEKVSAVFYTLVIPMLNPLIYSLRNKDVKDAAKR 307 black flying fox
XP_007438368 245 VGVLYGTLIFMYLRPDGTYTPQTDKMTSLFYTVAIPTLNPAIYSLRNTKVNQAVKK 300 Burmese python
Q8N127       248 VTLFYGALLFMYLQPTTSYSLDTDKVVAVFYTVVFPMFNPIIYSFRNKDVKNALKK 303 Western lowland gorilla
NP_001000660 248 VAIFQGTLFFMYFRPSSSYSLDQDKIASLFYTLVIPMLNPIIYSLRNKDVKEALYK 303 Norway rat
NP_001000663 248 VGILQGTTLFMYFRPSSAYSLDQDKMTSVFYLLIIPMMNPLIYSLRNKDVKEALIR 303 Norway rat
Q8NH69       248 VAIFQGTLLFMYFRPSSSYSLDQDKMTSLFYTLVVPMLNPLIYSLRNKDVKEALKK 303 human

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