1WD7


Conserved Protein Domain Family
HEM4

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pfam02602: HEM4 
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Uroporphyrinogen-III synthase HemD
This family consists of uroporphyrinogen-III synthase HemD EC:4.2.1.75 also known as Hydroxymethylbilane hydrolyase (cyclizing) from eukaryotes, bacteria and archaea. This enzyme catalyzes the reaction: Hydroxymethylbilane <=> uroporphyrinogen-III + H(2)O. Some members of this family are multi-functional proteins possessing other enzyme activities related to porphyrin biosynthesis, such as Swiss:Q59294 with pfam00590, however the aligned region corresponds with the uroporphyrinogen-III synthase EC:4.2.1.75 activity only. Uroporphyrinogen-III synthase is the fourth enzyme in the heme pathway. Mutant forms of the Uroporphyrinogen-III synthase gene cause congenital erythropoietic porphyria in humans a recessive inborn error of metabolism also known as Gunther disease.
Statistics
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PSSM-Id: 426866
Aligned: 72 rows
Threshold Bit Score: 93.5387
Created: 21-Mar-2022
Updated: 13-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1WD7_B           21 AFKALAEKLGFTPLLFPVQATEKvpvPEYRDQVRALA-Q------GVDLFLATTGVGVRDLLEAGKALGLDLEGPLAKAF 93  Thermus ther...
Q21DB0           14 TTAVALRTKGYEVLLAPMLRFEA-----------VAV-Kddp-eaRYGAVIVTSANALRAv-----AGQTGIARLLDLPL 75  Rhodopseudom...
Q11DF2           15 RTAGRLAALGFEPVLLPLTKIVP-----------LPV-EtwsgaeNIAALAITSANAVRH------TPPPLLRDLAGLPA 76  Chelativoran...
Q2YLM6           15 QTAAKLRAAGYEPVLLPLSRTVA---------LSFTV-Pd----eVFDALTITSANAFRH------IAPERLLPYRTLPL 74  Brucella abo...
wsu_vmp:AMF_620  17 ksKGALEELGFDVFVEPMFEVVH---------LRTEA-Lkl---qSYDVTVVTSRNGVDV--------IAKLTDERDICI 75 
Q3JDS0           28 KLSQAIELEGGQAVRFPTVEIGD-------SEVPAVVeEiigrldDFHWAVFVSANAVQRgv---pWVFARREMPANLKI 97  Nitrosococcu...
Q5ZRY5           21 VLNKKIIESGGIPIDCPTMEIMA--------SETNWI-NnlpdltSVNQAIFVSTNAVRYFMMELA--SKNINWPNSIRV 89  Legionella p...
Q7VRM3           14 DLVDRLVSIGKSAYHLPLISFST------GKTLFSIK-KylnflhTGDFLFIVSQHAVKYAHIQLL--SSGTQWPHKITY 84  Candidatus B...
LANL:CH55_3165   14 QLVTRLRALGRVAYHAPLIDFSP---GRDLPKLPELL-Qdm---qAGDLVFALSQNAVRYANPLLK--RNKLSWPVQLSY 84 
WP_011704441     14 ELAALLRQHGHAPLCCPLLETVA------GSELHRLP-Ell---pQADIVIAVSVHAVNFTHHFLL--QTGQTWP-NIDY 80  Aeromonas hy...
1WD7_B           94 RlARGAKAARALKEAg-LPPHAVG--DGTSKSLl--pLLP--QGRG-VA---ALQLYG-KPLPLLENALAERGYRVLPLM 161 Thermus ther...
Q21DB0           76 F-AVGARTAQSARDAg-FRN--VIvaDGDASALrd-kIVAaaRAKQlQKadtLLYLSGaEVARDLAGELRALGFNIATQT 150 Rhodopseudom...
Q11DF2           77 F-AVGERTAQVAAEAg-VSV--KDagAGDADRLa--eRIVa-SVQPgSK---ILLLCGrIRRGTLESRLAAAGLPVRAIE 146 Chelativoran...
Q2YLM6           75 F-AVGEGTAKAAQEAg-FKH--VIegGGDAVRLa--gTMRq-ALAPtAR---VLYLAGrVRQPVFEDEVAANGLSMMVCD 144 Brucella abo...
wsu_vmp:AMF_620  76 L-TVGDSTMKRATALg-FTN--VVsaGGTVRDVi--sCLNa-YQRG-TK---VLYARGeEVSYDLRGAAEKMGFEVEEAV 144
Q3JDS0           98 A-VVGRATAQALGNFg-LYPRLCPsyGYNSEALlamdELQ--DMKG-QQ---VVLFRAsGGRELLAKTLTKRGAKVEYAE 169 Nitrosococcu...
Q5ZRY5           90 T-AIGKGTSRVLNEFn-IQVSDVPelPDS-EHLltlnSLQ--QIRN-QT---ILLVKGeGGRQLIEEYLMLKGAKLCLLS 160 Legionella p...
Q7VRM3           85 Y-SIGHKTSSKMYSLsgILSK-YPqnEETSENLlqfpELIy-NISG-RR---ALILKGnNGLTTLQHTLQKRGALVLCCE 157 Candidatus B...
LANL:CH55_3165   85 Y-AIGRTTALALHTAsrLHVT-FPpmGETSEMLls-lPLLq-NLAG-KK---ALLLRGnGGRELLGASLAERGAAVTFCE 156
WP_011704441     81 F-AVGQASADAFSEVg-IQA--LSpdDPRSEGLlalpSLQ--QVNG-KQ---VLILRGnGGRDLIARTLASRGALVHYCA 150 Aeromonas hy...
1WD7_B          162 PYRHl--PDPEGILRLEEALLRGEVDALAFVAAIQVEFLFEGAKDPKalreALNTRVKALAVGRVTADALR-EWGVKPFY 238 Thermus ther...
Q21DB0          151 AYKMi--PVRDLPDEVCDAFAANRIEAVLHYSGRSARSFLEAARSAGi--eISALAVPQCCLSAAVAGVVR-EAGATRVM 225 Rhodopseudom...
Q11DF2          147 TYDTv--PVSLSGDELSTEIGDRSIDAVLVYSAVAATILSPFVS--------SFLTAAFIAISDRVAQNLPaGLGNRI-H 215 Chelativoran...
Q2YLM6          145 VYDTe--SVMYPPQALSRILGHAPFVAVMLYSGVAAASFVEAMRSITp---PFDEKTRFLCISARVAAKLP-SSWLQQAL 218 Brucella abo...
wsu_vmp:AMF_620 145 LYKVv--ARANLSPQCCDLLMNGEILGVVFYSTRTAKIFTELSRQYS----RLLRNVCAYSMSSGVFRALN-VGAWKRIL 217
Q3JDS0          170 VYRRclpSPS-VAANLRQVLVNVPVDVVITTSKAVLENLCHLAGEPLl---EKLRRTPLVVIGSRQVQQAR-ELGFTQIW 244 Nitrosococcu...
Q5ZRY5          161 VYKRvmpAI--DQEFINSLWRDDLVDIILLTSEQSIHNLFKMFSIEGq---MWLQNKPCLVISDRLAKVAS-LFGIKKIL 234 Legionella p...
Q7VRM3          158 CYTRk--PIQYNGKEQYNRMITLDIEIIVVTTTDMLKQLYYLIPQSHr--tDWLITRQLVVTSNRLAEYAK-SLGWSDII 232 Candidatus B...
LANL:CH55_3165  157 CYQRs--PIYYDGSEQSAHWQRAGVDILVVTSGEMLQQIYTLVPDYYr--sSWLLRCRLIVVSDRLAALAT-QMGWTEVR 231
WP_011704441    151 AYERhypAL--DGDALTCHWQAAGLDSLLVTSGELLQRLLELVPDQQl---PWLHDRLLVVPSPRVAEMAA-AAGFTHIT 224 Aeromonas hy...
1WD7_B          239 VDETERLGSlLQ 250 Thermus thermophilus
Q21DB0          226 EARRPDEAAlFD 237 Rhodopseudomonas palustris BisB18
Q11DF2          216 IAREPTEDAmLS 227 Chelativorans sp. BNC1
Q2YLM6          219 VSDHPDEKGlFr 230 Brucella abortus 2308
wsu_vmp:AMF_620 218 VSRRPTEESlFK 229
Q3JDS0          245 VAQEPSDAAlVQ 256 Nitrosococcus oceani ATCC 19707
Q5ZRY5          235 IS---HPERmIG 243 Legionella pneumophila subsp. pneumophila str. Philadelphia 1
Q7VRM3          233 ITKSANNTTiLR 244 Candidatus Blochmannia floridanus
LANL:CH55_3165  232 VAENADNDAlIr 243
WP_011704441    225 IAQGASNQAlTA 236 Aeromonas hydrophila
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