Conserved Protein Domain Family
HFD_TAF6L

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cd22932: HFD_TAF6L 
histone-fold domain found in TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L (TAF6L) and similar proteins
TAF6L, also called PCAF-associated factor 65-alpha (PAF65-alpha), is a component of the PCAF complex, which can efficiently acetylate histones in a nucleosomal context. The PCAF complex is composed of several TBP-associated factors (TAFs) and PCAF-associated factors (PAFs). It might be the human version of the yeast SAGA complex. With TAF5L, TAF6L acts as an epigenetic regulator essential for somatic reprogramming. It also regulates target genes through H3K9ac deposition and MYC recruitment, which trigger the MYC regulatory network to orchestrate gene expression programs to control embryonic stem cell state.
Statistics
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PSSM-Id: 467056
Aligned: 36 rows
Threshold Bit Score: 77.6207
Created: 4-Mar-2021
Updated: 27-Apr-2023
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q9Y6J9        12 IPRESVRLMAESTGl---eLSDEVAALLAEDVCYRLREATQNSSQFMKHt----kRRKLTVEDFNRALRWSSVEAVCG 82  human
RNA05667      24 CRSDTIQLWSWLEGnq--qLDDQSLKSLSEDISYRIRESLDNAVSLMHQc----kRFELKTTDVNQAFKILNIEKTFG 95  Brachionus plicat...
XP_012564671  11 IPKQCLDVWVESIGis--kLNDEICGNLAEDATYRIRETVHNAVMFMKHa----kRTCLTTEDFNNALKEMNTEIIYG 82  swiftwater hydra
RZC35242      59 IDADSLAIYAEQTAie--hLSEEITNTLTEDINYRLRYIINVKFIVIVRklrligRNAISSNDLEQTFENLKIDKVYG 134 Asbolus verrucosus
XP_002113264  31 LSLSTMKQWADQLGfg--eVNDEVAALLSEDASYRIRHLIQVASEVMIHs----kRTRMMTDDVNKAAKLCRLESIYG 102 Trichoplax adhaerens
KFM57010      79 LPEKIINSCAAKLEdd--dLHSGVAEILLEDTNYALRDVATSAIQFMRHg----rRYKLLASDFKKAFSIMSPDLVYS 150 Stegodyphus mimos...
XP_013087917  18 FTAASINAMAESAQls--pIPHEAAVALGEDASYQVRQVVMLATQYMKHa----kRRRLAIDDFNRAAKEMNVMPVHG 89  Biomphalaria glab...
OQR73094       9 LGTTSVERWSEQLDl---tLDPDALTILTEDLNFRLRQLAHDASQHMRHs----gRRRITPNDIDRALQWCNFGPSCG 79  Tropilaelaps merc...
PAA51335      60 LSAETLRLWCDSAGaq--lANRDAMLCLAQEVTYQTRHLITKAAQRMRHs----aRRRLTVDDVDSACLASKSPRLIG 131 Macrostomum lignano
NP_001259843 125 FDPRSIKIFWEQHDqtdveLSQDVCARLAEDASYKVWELINNVKIYSRHs-----GGVVTYDLVNEVLKDADVPPMLG 197 fruit fly
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