Conserved Protein Domain Family
SLC6sbd-B0AT-like

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cd10332: SLC6sbd-B0AT-like 
System B(0) neutral amino acid transporter AT1, 2 and 3, and related proteins; solute-binding domain
This subgroup includes the solute-binding domain of transmembrane transporters, which transport, i) neutral amino acids: NTT4 (also called XT1), SBAT1 (also called B0AT2, v7-3, NTT7-3), and B0AT1 (also called HND); the human genes encoding these are SLC6A17, SLC6A15, and SLC6A19 respectively, ii) glycine: B0AT3 (also called Xtrp2, XT2), iii) imino acids, such as proline, pipecolate, MeAIB, and sarcosine: SIT1 (also called XTRP3, XT3, IMINO). The human genes encoding B0AT3 and SIT1 are SLC6A18 and SLC6A20 respectively. Transporters in this subgroup may play a role in disorders including major depression, Hartnup disorder, increased susceptibility to myocardial infarction, and iminoglycinuria. This subgroup belongs to the solute carrier 6 (SLC6) transporter family.
Statistics
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PSSM-Id: 271364
Aligned: 18 rows
Threshold Bit Score: 826.523
Created: 4-Dec-2008
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
Feature 1:Na binding site 2 [ion binding site]
Evidence:
  • Comment:based on Aquifex aeolicus LeuT (SLC6) with structure
  • Comment:One of two Na+ binding sites in Aquifex aeolicus LeuT. It binds the Na+ ion designated Na2, and appears conserved in Vibrio parahaemolyticus vSGLT and other SLC5 proteins

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                       #  #                                                             
CAK11130      68 RPAWGSKLQYILAQVGFSVGLGNVWRFPYLCQKNGGG---------AYLVPYLILLLLIGIPLFFLELAVGQRIRRGSIG 138 zebrafish
Q96N87        18 RPKWDNKAQYLLSCTGFAVGLGNIWRFPYLCQTYGGG---------AFLIPYVIALVFEGIPIFHVELAIGQRLRKGSVG 88  human
Q9H1V8        60 RPAWNSKLQYILAQIGFSVGLGNIWRFPYLCQKNGGG---------AYLVPYLVLLIIIGIPLFFLELAVGQRIRRGSIG 130 human
Q695T7        32 RPKWDNKAQYMLTCLGFCVGLGNVWRFPYLCQSHGGG---------AFMIPFLILLVLEGIPLLYLEFAIGQRLRRGSLG 102 human
XP_001641383   6 RERWNNRTEFLLTLVGYTIGLGNVWRFPHLCHKNGGA---------SFLIPYGIMLAVEGIPLYYMELCIGQRMRKGSIG 76  starlet sea ane...
XP_002112089  15 RLRWDNKAQFILATIGFAVGLGNVWRFPYLVQKNGGG---------AFLIPYFIMLVIEGIPIFHLELAIGQRLRNGPVG 85  Trichoplax adha...
XP_002121761  59 RPAWDNQVQFLLACIAYAVGLGNIWRFPYLAQTYGGGddnvvwnecAFLIPYILMLIFEGIPLFLLELAVGQRLRQGAIG 138 Ciona intestinalis
XP_002128205  39 RPAWDNKLQYLMAALGFAVGLGNIWRFPYLCKKNGGG---------AFLIPYVIMLFVEGYPLYYLELAVGQKIRKGTIG 109 Ciona intestinalis
EFX84589     150 RENWDSKLSFLLATIGYAVGLGNVWRFPYLAQKNGGG---------AFLIPYAIMLAVEGLPIVFLELAIGQRLRKGAIG 220 common water flea
AAI39669      33 RDGWDSKVEYFLAQVGFSVGLGNVWRFPYLCHQNGGG---------AFILLYVVLMALVGVPLFFLELAAGQSIRQGSIG 103 zebrafish
Feature 1                                                                                        
CAK11130     139 VWNYISPHLGGIGFASCLVCFFVALYYNVIIGWSLFYFSQSFQQPLPWHECPLVKnktn----tyiEPECEKSSATTYYW 214 zebrafish
Q96N87        89 VWTAISPYLSGVGLGCVTLSFLISLYYNTIVAWVLWYLLNSFQHPLPWSSCPPDLnrt------gfVEECQGSSAVSYFW 162 human
Q9H1V8       131 VWHYICPRLGGIGFSSCIVCLFVGLYYNVIIGWSIFYFFKSFQYPLPWSECPVVRngsv----avvEAECEKSSATTYFW 206 human
Q695T7       103 VWSSIHPALKGLGLASMLTSFMVGLYYNTIISWIMWYLFNSFQEPLPWSDCPLNEnqt------gyVDECARSSPVDYFW 176 human
XP_001641383  77 VWNEISPYLGGVGIASVVVCFLVCLYYNVVISWCVFYFVQSFQSPLPWAACPTHKvtignitrmepVPACDVSKPTEYFW 156 starlet sea ane...
XP_002112089  86 SWNLISPKLKGVGVAGLLVSIVASSYYIIIIAYCLMYLFSSFQVVLPWSRCPTYTppgqpanvtlpVEECANSNPVVYFF 165 Trichoplax adha...
XP_002121761 139 TWVKFHPYLGGIGIGSMVVSFMVGLYYNTIIAWCFWYICNSFTDPLPYAKCPLTDnnt------ayVAECENSGVTDYFW 212 Ciona intestinalis
XP_002128205 110 VWTHIHPYLGGVGIASNVISLLIGLYYNMILGWAIFYLFNSFQTDLPWATCPMINdt-------hmVQECQLSSSTNYFW 182 Ciona intestinalis
EFX84589     221 VWAQISPYLGGIGIASTVVSFNVALYYNTIIAWCLYYLFQSFQYPLPWSECPKEYfeng---syaiNMECKQSSPTQYFW 297 common water flea
AAI39669     104 VWRHISPKLVGIGYSSCVVCFFVALYYNVIIGWSIFYLGNSFQYPLPWEKCPTEGns--------tVKECAASSPTAYFW 175 zebrafish
Feature 1                                                                                        
CAK11130     215 YRVALDISDSISeGGGLNWRMTLCLLAAWTMVCLAMIKGIQSSGKVMYFSSLFPYVVLICFLARAFL-LKGSVDGIIHMF 293 zebrafish
Q96N87       163 YRQTLNITADINdSGSIQWWLLICLAASWAVVYMCVIRGIETTGKVIYFTALFPYLVLTIFLIRGLT-LPGATKGLIYLF 241 human
Q9H1V8       207 YREALDISDSISeSGGLNWKMTLCLLVAWSIVGMAVVKGIQSSGKVMYFSSLFPYVVLACFLVRGLL-LRGAVDGILHMF 285 human
Q695T7       177 YRETLNISTSISdSGSIQWWMLLCLACAWSVLYMCTIRGIETTGKAVYITSTLPYVVLTIFLIRGLT-LKGATNGIVFLF 255 human
XP_001641383 157 YRTTLGISSGIEdGGGMNWKLWGCLVATWILVWLCMCKGIKVTGKIVYITATLPLILLIIFFFRGKSrVNGYQDGLRLLL 236 starlet sea ane...
XP_002112089 166 FREVNDVSNNINiSGGLYWKLTLCLLGGWIIIYCSILKGIKSSGKVIYFTATFPYLVLFIFMIRGFT-LHGFENGLLHLV 244 Trichoplax adha...
XP_002121761 213 YRSTLNVSADMDhTGGLVWWVVICLILAWGLIWVTMIKGIESSGKAMYVTATFPYLVLFIFLVRGLT-LKGSGEGVKFLF 291 Ciona intestinalis
XP_002128205 183 YRDTLDISYRIEdGGAQNWRMVLVLFVAWLIVFLGMNKGIKSSGKVMYFATSFPYIVLIAFFFRGMT-LDGAVEGVKYMF 261 Ciona intestinalis
EFX84589     298 YRETLDISPDINtPQSFNWKITLCLFIAWLMAYLCMAKGIASSGKVVYITATFPYIVLIIFFVRGMT-LHGMADGLTHLF 376 common water flea
AAI39669     176 YRKALDITDSIDeTGEFNFILTGCLLAAWVIVCLAMYKGIKSSGKVMYFSSVFPYVVLLCFLIRGVT-LDGASEGIKFMF 254 zebrafish
Feature 1                                                                                        
CAK11130     294 TPK-LEIMLEPkVWREAATQVFFALGLGFGGVIAFSSYNKRDNNCHFDAVLVSFINFFTSVLATLVVFAVLGFKanimna 372 zebrafish
Q96N87       242 TPN-MHILQNPrVWLDAATQIFFSLSLAFGGHIAFASYNSPRNDCQKDAVVIALVNRMTSLYASIAVFSVLGFKatndye 320 human
Q9H1V8       286 TPK-LDKMLDPqVWREAATQVFFALGLGFGGVIAFSSYNKQDNNCHFDAALVSFINFFTSVLATLVVFAVLGFKanimne 364 human
Q695T7       256 TPN-VTELAQPdTWLDAGAQVFFSFSLAFGGLISFSSYNSVHNNCEKDSVIVSIINGFTSVYVAIVVYSVIGFRatqryd 334 human
XP_001641383 237 YQRyFNRLKDPlVWLDAAVQIFYSLGVAYGSLIAFSSYNPMKNDSTRDAITVCFVNCATSIYASIVVFCFIGFQaqdrmn 316 starlet sea ane...
XP_002112089 245 TPQ-FEKLRDPlVWLDAATQIFYSLGVGFGSLIAFASYNPIKNKCGRDAVCVSLVNCCTSLFAAVVVFSVLGHMattk-- 321 Trichoplax adha...
XP_002121761 292 TPD-IQVLSNPqVWLDAATQIFFSLGLGFGGVIAFSSYNPKKQDCQRDALIIALTNSLTSIFASIVIFAILGYRatvqfe 370 Ciona intestinalis
XP_002128205 262 SPD-VSRLKDAdVWREAATQIFFSLGLGYGSIIAYSSYNQPKNNCRKDAIFIATANCITSIFACITVFSILGFKaktram 340 Ciona intestinalis
EFX84589     377 TPK-WEKLADPvVWLEAGTQIFFSLGLAFGGLIAFSSYNPVSNHCYRDAILVSLTNFFTSMFAAVVIFSVIGFKarmty- 454 common water flea
AAI39669     255 YPR-LEIWADVqVWRQAATQVFFALGLGFGSVIAYSSYNPRNNNCHRDAFTVSGVNFMTSVLATLVVFAVLGFRaktiaa 333 zebrafish
Feature 1                                                                                        
CAK11130     373 kcvemntkkiigflgkein-pgliphhinfsqvspedyqqmtniIRGVMENDYPrlgLDNCDIKEELNKAVQGTGLAFIA 451 zebrafish
Q96N87       321 hcldrnilslind------------fdfpeqsisrddypavlmhLNATWPKRVAqlpLKACLLEDFLDKSASGPGLAFVV 388 human
Q9H1V8       365 kcvvenaekilgylntnvlsrdlipphvnfshlttkdymemynvIMTVKEDQFSalgLDPCLLEDELDKSVQGTGLAFIA 444 human
Q695T7       335 dcfstniltling------------fdlpegnvtqenfvdmqqrCNASDPAAYAqlvFQTCDINAFLSEAVEGTGLAFIV 402 human
XP_001641383 317 tcl--------------------------------eekrndierMLNVTGLISQgmpDWDKVNQGEISDISQGQGLAFIV 364 starlet sea ane...
XP_002112089 322 ----------------------------------------ydacISSVNATMGMeaaLNKCKIADYLDSVGSGPGLVFIV 361 Trichoplax adha...
XP_002121761 371 rcldgniaimsdaydv-------pdgyitydnydirvatlngtqNWAGEVVTTNslgLATCDLQAYLSEASQGTGLAFIV 443 Ciona intestinalis
XP_002128205 341 dcfesnkimlvdhlpe-------nfpdrenllnftfnelllefnLDSSQKSTEHllkMTNCSIESELDTDVQGTGLAFIA 413 Ciona intestinalis
EFX84589     455 ---------------------------------------encleTRNQTLVRAVlqeLPVCDLQQELDNTASGTGLAFII 495 common water flea
AAI39669     334 ecvkrnlkallkvtssap---lpvlsinasdvesisldeyanwySTQGMELSISdynITACSLEDELRQGVEETGLAFIA 410 zebrafish
Feature 1                                #  ##                                                   
CAK11130     452 FTEAMTHFPaspFWSVMFFLMLVNLGLGSMFGTIQGILTPIVDt----fKVRKEYLTVGCCVLAFFIGLTFVQRsGNYFV 527 zebrafish
Q96N87       389 FTETDLHMPgapVWAMLFFGMLFTLGLSTMFGTVEAVITPLLDvgvlprWVPKEALTGLVCLVCFLSATCFTLQsGNYWL 468 human
Q9H1V8       445 FTEAMTHFPaspFWSVMFFLMLINLGLGSMIGTMAGITTPIIDt----fKVPKEMFTVGCCVFAFLVGLLFVQRsGNYFV 520 human
Q695T7       403 FTEAITKMPlspLWSVLFFIMLFCLGLSSMFGNMEGVVVPLQDlrvippKWPKEVLTGLICLGTFLIGFIFTLNsGQYWL 482 human
XP_001641383 365 FTDAINKMPlapVWAVMFFLMLITVGIDTEFGMLEGVVTPIRDmkl-lpNWKKEYVSGLISLVICVLGFPLVQHsGEYWV 443 starlet sea ane...
XP_002112089 362 FADIIAGFSppqFWSIIFYFMLLTLGIDSIFGAMETILTTLTDsayfkkIRKEVLAGTGICFCLFLFGFIFTQRsGLYFV 441 Trichoplax adha...
XP_002121761 444 FTEAIINMPgspVWSVLFFMMLLSLGLGSMFGTVEGVVTPLFDlg---lKVPKPVLTGCVCLISCAIGLIFCTRaGNYWV 520 Ciona intestinalis
XP_002128205 414 FTEAILKFPaapFWSVLFFFMLLNIGMSSEFGILQTVVTSVLDsg---vKVSKTKLTAGMCSCMFVVGLLFTQRsGSYFL 490 Ciona intestinalis
EFX84589     496 CTEAVNQFPlapLWSVLFFLMLLTLGIDSQFGTLEGVITSIVDlki-fpRVRKEILTATLCGFCCVLSIIFTHGaGNYIF 574 common water flea
AAI39669     411 FTEAMTLFPgspFWSALFFLMLLNLGLSTMFGTMAGILTPLTDtfk-tlRNHKLIFTICSCTVGFVIGLVFTQRcGNYFV 489 zebrafish
Feature 1                                                                                        
CAK11130     528 AMFDDYSATLPLLIVVLLENIAVAWVYGTDKFfEDLKDMLGFTPy-------rYYYYMWKFVTPVLLlGLLAASVIqlgl 600 zebrafish
Q96N87       469 EIFDNFAASPNLLMLAFLEVVGVVYVYGMKRFcDDIAWMTGRRPs-------pYWRLTWRVVSPLLL-TIFVAYIIllfw 540 human
Q9H1V8       521 TMFDDYSATLPLTLIVILENIAVAWIYGTKKFmQELTEMLGFRPy-------rFYFYMWKFVSPLCMaVLTTASIIqlgv 593 human
Q695T7       483 SLLDSYAGSIPLLIIAFCEMFSVVYVYGVDRFnKDIEFMIGHKPn-------iFWQVTWRVVSPLLMlIIFLFFFVvevs 555 human
XP_001641383 444 QLVDGYCSGIPLLIIALVECIAISYIYGIDRFsDDIQYMTNKPPr-------fIWKWCWKVISPLAIlAVLGMSIKgmse 516 starlet sea ane...
XP_002112089 442 EVFDAVSLPIPLLVIALAEVSGILFVYGPKRLcNDIEYMTGDQPn-------lYWKACWFIITPLSIvVIIIATIIqlaq 514 Trichoplax adha...
XP_002121761 521 DIFNNYAGSIPLLVIAFFEITVVSWGYGLKKFdEDLEWMFDKPQsiigwilyyYFRLCWFIISPVILlVVFGAYLYttat 600 Ciona intestinalis
XP_002128205 491 DIFDTYSATLSLVTIALCEVLSVSYIYKMGRFeKDLKEMVGVSPg-------yYWTISWRFTCPLALlVILGASVAglft 563 Ciona intestinalis
EFX84589     575 TLFDDFSGNVPLLIIAFFECIAVSYFYGLDRFaNDIELMTGSRPg-------iYWMICWKYLSPLTMlIIVIASFAkiiv 647 common water flea
AAI39669     490 TMFDDYSATLPLIIVVIFQTISVSWVYGADRFlEDLKQMLNRPVp-------vIYKYLWKFVCPIAMlGLLGASLLkmil 562 zebrafish
Feature 1                                                         
CAK11130     601 appsYSAWNQQLAKEQSl---SYPPWGLAVCISLVVTAILPVPVVFILR 646 zebrafish
Q96N87       541 kplrYKAWNPKYELFPSrqekLYPGWARAACVLLSLLPVLWVPVAALAQ 589 human
Q9H1V8       594 tppgYSAWIKEEAAERYl---YFPNWAMALLITLIVVATLPIPVVFVLR 639 human
Q695T7       556 qeltYSIWDPGYEEFPKsqkiSYPNWVYVVVVIVAGVPSLTIPGYAIYK 604 human
XP_001641383 517 grpsYSVWNDKLKKTVSk---PLPPWGVFLGIMLTLCSIFFIPAVAFLR 562 starlet sea anemone
XP_002112089 515 stlmYSQWSKETASGASl---PYPGWLTAFMFCVILLPILAIPGAALVE 560 Trichoplax adhaerens
XP_002121761 601 gqlqYSAWVGDGSQQML----DYPWFGTMVIILLIVLPCVGIPTVWFYR 645 Ciona intestinalis
XP_002128205 564 kditYSGWNPITASKDDl---LFPTWGIVLIIFLILASVSCIPVYALLY 609 Ciona intestinalis
EFX84589     648 egsgYLAWVAEAGTTRHl---DWPPWAQVLIAVLVLVSALWIPGIAIAR 693 common water flea
AAI39669     563 krpeYSAWNREKASKEDl---PYPDWALAVLIILIIIASLPVPIGYIHS 608 zebrafish

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