Conserved Protein Domain Family
T-box_Drosocross-like

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cd20681: T-box_Drosocross-like 
DNA-binding domain of Drosophila Dorsocross and related T-box proteins
Drosophila Dorsocross (Doc) includes three Dorsocross paralogs, Doc1-3. These are key cardiogenic T-box transcription factors during specification and differentiation of heart cells. Drosophila Doc also functions in caudal visceral mesoderm development, and modulates Notch signaling in the developing Drosophila eye by regulating the expression of Delta in the eye imaginal discs. Doc also functions in the morphogenesis of epithelial tissues: in Drosophila, which possesses a single extraembryonic (EE) membrane, it is essential for EE epithelia tissue maintenance while in Tribolium castaneum, which has 2 EE membranes, Doc plays a major role in EE morphogenetic events throughout development without affecting EE tissue specificity or maintenance. This subfamily belongs to the T-box family of transcription factors which play a multitude of diverse functions throughout development. The founding member of the T-box family is Brachyury (also known as TBXT, or T). T-box family members share a conserved DNA-binding domain (T-box) which binds DNA in a sequence-specific manner. Common features shared by T-box family members are DNA-binding and transcriptional regulatory activity, a role in development, and conserved expression patterns.
Statistics
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PSSM-Id: 410332
Aligned: 15 rows
Threshold Bit Score: 323.128
Created: 22-Jul-2019
Updated: 25-Oct-2021
Structure
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Aligned Rows:
 
DNA binding
Feature 1:DNA binding site [nucleic acid binding site]
Evidence:
  • Comment:based on related T-box transcription factors bound with DNA
  • Comment:T-box monomers dimerize upon DNA binding; some form weak dimers, others tight dimers, some may bind as non-associating monomers where the dimer is kept in register by the DNA

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                    ##                                #                  
NP_648283      59 VEAKLEnNDLWQQFHKIgTEMIITKSGRRMFPSMRVSLSGLEEEASYCVLLEMVPIGdcRYKFSG--------------- 123  fruit fly
XP_026290534   44 VQVTLQdRELWAKFHRQgNEMIITKTGRRMFPSLRVKVSGMEADEYYFVVLEMRLAAntRFKYSN--------------- 108  western flowe...
XP_014246275   13 VQVELKnVDLWKQFHKEgTEMIITKSGRRMFPSLRLSLKGLHPDVRYFVLFELTLSSnhRFKFIS--------------- 77   bed bug
RZF44372       13 AEMKLNnDDIWNQFHEHtTEMIITKSGRRMFPYLRLEAAGLDPDARYFVLLELNLSSgkRYKFNG--------------- 77   small brown p...
ABB16909       19 TKAQLAnKELWDQFHDLqTEMIITKSGRRMFPALNLKITDLDPSADYCLFLEMTLAHhcRFKFSSs-------------- 84   red flour beetle
XP_014616981   38 VKVELYnSSLWKKFNAEtTEMIITKNGRRMFPSVEITVSGLKEQDNYCILFELAPASdrRQKYVKngeggdetdvksfqq 117  Polistes cana...
OXU26906       58 VKVELEnRKLWEQFHAEtTEMIITKSGRRMFPSIQLSVSGLERRSRYCILLELDLASdrRHKYTGgvdssgnrt-saatt 136  Trichomalopsi...
XP_008548701   35 ITVTLKgKNLWQEFHNHnTEMVITKQGRRMYPGVEVNVAGLDPMTYYCMLLEIVPSSehRQKYVTnesanrp-----gak 109  Microplitis d...
XP_012231497   71 ITVKLQnENLWQKFHTEtNEMIITKLGRRMYPSIQLIVSGLEKHERYYIVLEIQPACsrRYKYCRnsagqd-------gr 143  Argentine ant
XP_014212392   54 ISMELSnRDLWRQFKNQeTEMIITKSGRRMFPAIQISVRGLNPDKKYSVAIEMVLVTghRYKYNStgge----------- 122  Copidosoma fl...
Feature 1                                                            #  #              ##         
NP_648283     124 ---SQWVPAGGAEPQs--PQRMYLHpDSPATGAH-WQSQALLFNKv-----KLTNNt--lDSSGHIVLaSMHKYQPRLHI 190  fruit fly
XP_026290534  109 ---GHWVPAGDADVQpqsKSCIFVHpDSPAKGSA-WSARDINFQRpnphgaKLTNNtadtTDYNMILT-SMHKYVPVIHV 183  western flowe...
XP_014246275   78 ---SEWVTGGGAEPQthaSTRMHIHpDSPATGAS-WMAQDVSFHRv-----KLTNNt--lDRSGNLVLtSMHKYQPRIHI 146  bed bug
RZF44372       78 ---AQWTPIGNAEPQlppASRLYIHpDSPALGRH-WMSQSILFNKv-----KLTNHt--lDRSGNIVLtSMHKYMPTIHL 146  small brown p...
ABB16909       85 ---VGWSPAGHEEAQs--PHRIYMHpESPSKGSH-WMNQDISFSRv-----KLTNTc--sPPQGQLVLsSMHKYQPRILI 151  red flour beetle
XP_014616981  118 pamKGWMPTSFAEPQpvlNRRILLHpDSPASGDHwMKQKPISFSKv-----KITNDts-sNQQNQILLtSMHKYQARIWI 191  Polistes cana...
OXU26906      137 tgpRGWTSAGPAEPQpslERRLYIHpDSPATGAH-WMQHPLSFSKl-----KLTNNv--vEQHSNVLLtSMHKYVPRILI 208  Trichomalopsi...
XP_008548701  110 vktGRWTNAGAAEPQpplERRVVVHpNSPATGDH-WMRESVSFAKi-----KITNNt--dDQQNNILLcSMHKYVAKVWV 181  Microplitis d...
XP_012231497  144 sdiGGWSYAGPAEPQprfDRRIYMHpDGPAMGDY-WMKNTISFTKl-----KLTNNv---VERNHVLLtSMHKYIPTIRI 214  Argentine ant
XP_014212392  123 nklAGWTESGPAEAQpplGRRFFWHqDGPAPGAH-WEQQPLNFSKl-----KLTNNa--qELHGNILLtSMHKYLPRIWI 194  Copidosoma fl...
Feature 1                                       ####    #  ##  #########
NP_648283     191 IRSSeltq---lpwaPQQAFVFPETEFVAVTAYQNDRITKLKIDNNPFAKGFRE 241  fruit fly
XP_026290534  184 VRASdraa---lpaaPRKSFSFPETEFVAVTAYQNEAITKMKIDNNPFAKGFRE 234  western flower thrips
XP_014246275  147 VKASdila---ltwsPTLTVTFPETEFIAVTAYQNQKITKLKIDYNPFAKGFRE 197  bed bug
RZF44372      147 VMASdvla---vhwsPTASFRFKETEFVAVTAYQNEKITKLKIDNNPFAKGFRE 197  small brown planthopper
ABB16909      152 VKAStaqa---lgwaPTNVFTFPETQFIAVTAYQNEKITKLKINYNPFAKGFRE 202  red flour beetle
XP_014616981  192 IMCDnllhikdyhsyPSAFFTLKETEFIAVTAYQNENIIHLKIANNPFAKGFRK 245  Polistes canadensis
OXU26906      209 VRCDeitnlqdlyknPSSVFTFKETEFIAVTAYQNENITKLKIDNNPFAKGFRT 262  Trichomalopsis sarcophagae
XP_008548701  182 IQSSqtnli-alftqPSSKFIFPETEFIAVTAYQNTTIKVIKIDNNPFAKGFRQ 234  Microplitis demolitor
XP_012231497  215 IRCNnaetltelfshPAASFTFNETTFIAVTAYQNKNITQLKIDNNPFAKGFTD 268  Argentine ant
XP_014212392  195 VQCDhtpsldhitqlPAAVFEFPETEFIAVTAYQNENITKLKINHNPFAKGFRE 248  Copidosoma floridanum

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