1UPT,1MOZ,2X77


Conserved Protein Domain Family
Arl1

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cd04151: Arl1 
Click on image for an interactive view with Cn3D
ADP ribosylation factor 1 (Arf1)
Arl1 subfamily. Arl1 (Arf-like 1) localizes to the Golgi complex, where it is believed to recruit effector proteins to the trans-Golgi network. Like most members of the Arf family, Arl1 is myristoylated at its N-terminal helix and mutation of the myristoylation site disrupts Golgi targeting. In humans, the Golgi-localized proteins golgin-97 and golgin-245 have been identified as Arl1 effectors. Golgins are large coiled-coil proteins found in the Golgi, and these golgins contain a C-terminal GRIP domain, which is the site of Arl1 binding. Additional Arl1 effectors include the GARP (Golgi-associated retrograde protein)/VFT (Vps53) vesicle-tethering complex and Arfaptin 2. Arl1 is not required for exocytosis, but appears necessary for trafficking from the endosomes to the Golgi. In Drosophila zygotes, mutation of Arl1 is lethal, and in the host-bloodstream form of Trypanosoma brucei, Arl1 is essential for viability.
Statistics
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PSSM-Id: 206718
Aligned: 14 rows
Threshold Bit Score: 281.99
Created: 1-Sep-2005
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
  next features
Conserved site includes 16 residues -Click on image for an interactive view with Cn3D
Feature 1:GTP/Mg2+ binding site [chemical binding site]
Evidence:
  • Structure:1UPT: Human Arl1 binds GTP and Mg2+, defined using 3.5 A contacts

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1            #######            #  #                     #                            
1UPT_A      9 RILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVETVTYKNLKFQVWDLGGLTSIRPYWRCYYSNTDAVIYVVDSCDRD 88  human
1MOZ_A     20 RILILGLDGAGKTTILYRLQIGEVVTTKPTIGFNVETLSYKNLKLNVWDLGGQTSIRPYWRCYYADTAAVIFVVDSTDKD 99  baker's yeast
AAN12955   19 RILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNNIKFQVWDLGGQTSIRPYWRCYFPNTQAVIYVVDSSDTD 98  thale cress
EAL21509   25 RILMVGLDSAGKTTILYRLQIGEVVSTIPTIGFNVETVSYKNINFQVWDLGGQSSIRPYWRCYYANTQAIIYVIDSSDTS 104 Cryptococcus neofo...
XP_758827  22 RILMLGLDSAGKTTILYRLQIGEVVSTIPTIGFNVETVTFKNIKFQVWDLGGQTSIRPYWRCYYANTTAIIYVIDASDIE 101 Ustilago maydis 521
CAJ03412   22 RVLMLGLDNAGKTSILYRLHLGDVVTTVPTVGVNLETLQYKNISFEVWDLGGQTGVRPYWRCYFSDTDAVIYVVDSTDRD 101 Leishmania major
CAI39300   19 RILILGLDNSGKTTILYKLHLNEVIQTAPTMGFNVETLTYKNLKFQVWDLGGQNAIRLYWRSYYPNTNGIIYVIDSFDEG 98  Paramecium tetraur...
AAF49556   18 RILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYSNTDAIIYVVDSADRD 97  fruit fly
AAP06418   18 RILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVETVVHKNLKFQVWDLGGQTSIRPYWRCYYSNTDAIIYVVDSMDRD 97  Schistosoma japonicum
NP_495816  18 RILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVEQVEYKNLKFQVWDLGGQTSIRPYWRCYYANTDAIIYVVDSADRD 97  nematode
Feature 1                                ## #                              ###               
1UPT_A     89 RIGISKSELVAXLEEEELRKAILVVFANKQDXEQaxtSSEXANSLGLPALk-dRKWQIFKTSATKGTGLDEAXEWLVET 166 human
1MOZ_A    100 RMSTASKELHLMLQEEELQDAALLVFANKQDQPGalsASEVSKELNLVELk-dRSWSIVASSAIKGEGITEGLDWLIDV 177 baker's yeast
AAN12955   99 RIGVAKEEFHAILEEDELKGAVVLIFANKQDLPGaldDAAVTEALELHKIk-sRQWAIFKTCAVKGEGLFEGLDWLSNT 176 thale cress
EAL21509  105 RLATSRSELLTMLSEDELKSVPVLVFANKQDVEGalsPGEISDKLGLAGQekgREWSVRGSCAIKGDGLEEGLDWLVNT 183 Cryptococcus neofor...
XP_758827 102 RLGTAKAELLAMLSEEELKDSKLLVFANKQDLPGaldEGQVSEKLGLSELk-dRQWSIHKCCATKGEGLEEGLDCLARD 179 Ustilago maydis 521
CAJ03412  102 RMGVAKHELYALLDEDELRKSLLLIFANKQDLPDaasEAEIAEQLGVSSIm-nRTWTIVKSSSKTGDGLVEGMDWLVER 179 Leishmania major
CAI39300   99 RLKTSKEELMTLLQEEELKNVPLLILANKQDMQGalsETEICEFLKLEEEk-tRNWTIVKCSALTGLGLSEGMEWMANA 176 Paramecium tetraurelia
AAF49556   98 RIGISKDELLYMLREEELAGAILVVLANKQDMDGcmtVAEVHHALGLENLk-nRTFQIFKTSATKGEGLDQAMDWLSNT 175 fruit fly
AAP06418   98 RVGISKQELFSMLEEDELRDAVLVILANKQDISGcmtISEVAQSLGLASIk-nRRYQLFKTSALKGEGLEEAMDWLSNP 175 Schistosoma japonicum
NP_495816  98 RVGISRQELATMLQEDELQGAVLAVLANKQDIAGcltETEVYKALGLDALr-nRTIQIFKTSASKGEGLDPAMDWLANQ 175 nematode

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