Conserved Protein Domain Family
Vps51

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pfam08700: Vps51 
Vps51/Vps67
This family includes a presumed domain found in a number of components of vesicular transport. The VFT tethering complex (also known as GARP complex, Golgi associated retrograde protein complex, Vps53 tethering complex) is a conserved eukaryotic docking complex which is involved recycling of proteins from endosomes to the late Golgi. Vps51 (also known as Vps67) is a subunit of VFT and interacts with the SNARE Tlg1. Cog1_N is the N-terminus of the Cog1 subunit of the eight-unit Conserved Oligomeric Golgi (COG) complex that participates in retrograde vesicular transport and is required to maintain normal Golgi structure and function. The subunits are located in two lobes and Cog1 serves to bind the two lobes together probably via the highly conserved N-terminal domain of approximately 85 residues.
Statistics
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PSSM-Id: 462568
Aligned: 44 rows
Threshold Bit Score: 49.5861
Created: 23-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q7S488        247 LDSPDFSAQPYLA-ELLQSSTLAELLKTYARILSEIRALDAEKKALVYDNYSKLISATETIRKMRTSMfdpnaltgDKLD 325  Neurospora cr...
Q4E335          3 SEEAVQEVRRIFT-----NNTVEQVRDYLSTITRGIQESDYRLKQIVGQSYRDLIAACDKVVGMEQTC--------RKLL 69   Trypanosoma c...
CBZ11904        3 MEEAAQEVRRILC-----QNDVEETLNYLSTVTRCIEDNQHDLRAVIGNSYRDLLGACDGVVGMERDC------------ 65  
Q54ZB3        113 TKQYESDVKILFE-----RNTPEQMKQMEFKKRSEIEDMKSQLRNLIGNKYRDLVEGSDAIVKMKKST--------ELIS 179  Dictyostelium...
Q9FFF3         21 NGGGQRDAESLFR-----TKPMSEIRIVESATRKNIEDKKEELRQLVGTRYRDLIDSADSIVHMKSLC--------ESIS 87   thale cress
Q2U987          1 MALDGPDPQSLNSwQDAFQYPIPTVRRVEQELRRDIASNKEKLRALVGTRYRELVGTAETIVSMNREM--------QEVD 72   Aspergillus o...
Q7RZT4          9 LSTLLSSAQIFSS-----NYPLPHIRAIHKALHAEIDDKQSRLRTQVGGSYRELLGTADTIVQMRGDM--------ESVQ 75   Neurospora cr...
Q6C0N6         24 MALGLSSWQSTMS-----KYSIADVVIIEQQLRSKKDRRNEELRCLINTTYRDLLGTTDDIQSLSEKM--------TKQH 90   Yarrowia lipo...
Q5KJF4         98 EDWADIEPDEVFR-----RLPVREVKRVEAKMRSEALNKQSELRAMVGARYRDLLTSATQITSLRSSS--------LRLS 164  Cryptococcus ...
XP_011387543   79 FDPFGTEPDTLFL-----SLTVKEVEAYERAVRSTALGKQEELRSLVGQRYEDLLGTANTIIDMAGSS--------SGLS 145 
Q7S488        326 PMASTLDAVLGKVYE 340  Neurospora crassa
Q4E335         70 QMQKQLHTEQQLTLS 84   Trypanosoma cruzi
CBZ11904       66 ADILTIEEAMERASA 80  
Q54ZB3        180 DNLSLMQSELKQFSE 194  Dictyostelium discoideum
Q9FFF3         88 ANISSIHGNIRSLSS 102  thale cress
Q2U987         73 ATLADIGRRCNPRLM 87   Aspergillus oryzae
Q7RZT4         76 ATLGRMGGRCGRQVV 90   Neurospora crassa
Q6C0N6         91 TLLSNLSHG----DI 101  Yarrowia lipolytica
Q5KJF4        165 ENLKQIVQSCQNPEP 179  Cryptococcus neoformans
XP_011387543  146 HRLLELLSRVRLAAA 160 
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