Conserved Protein Domain Family
Nsp1_C

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pfam05064: Nsp1_C 
Nsp1-like C-terminal region
This family probably forms a coiled-coil. This important region of Nsp1 is involved in binding Nup82.
Statistics
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PSSM-Id: 461540
Aligned: 18 rows
Threshold Bit Score: 133.207
Created: 22-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q5B4N1       389 LGASTAG-PPppaqsrLKNKTMDEIITRWATDLTKYQKEFREQAEKVAEWDRMIVENGSRVQKLYGSTVDAERATQEIER 467 Aspergillus nid...
EDO18242     589 LNSKEVE-IKpi---sLDNKTLDDLITKWTEQLSGAATHFNEYSNKINQWDETLVKGGGLISKLYSDTLVAEQTQNKIDQ 664
Q6FPU8       663 LESKPVE-VKpv---sLDNKTLDDLVTKWTNQLSSASKHFDQYSKRITDWDRILVDGGKQISQLYTEAVNAEQAQNKIDQ 738 [Candida] glabrata
Q2HEA0       394 LSASTMG-PAsql-prLKNKTMDEIITRWATDLSKYQKEFKDQASKVAEWDRMLVENGEKIQKLYTSTYEAERANAEIDR 471 Chaetomium glob...
Q7SEK6       442 LASTTTG-PTstl-prLKNKTMDEIITRWATDLSKYQKEFKSQAAKVAEWDRLLVENGEKIQKLYTSTYEAEKASNEIER 519 Neurospora crassa
Q0U9D0       462 LANSTAG-PPpsaqsrLKNKSMDEIITRWAADLSKYQKEFQTQAETVAKWDRALVENSDKVRQLYSKTFQAERDAAEVER 540 Parastagonospor...
XP_001629560 283 ASAVPT--ALtstapqLTYKQLEDHINKWALELEDYERTFLDQAAQVNAWDRLLMENGEKITELNSGVESVKAEQKRLDE 360
NP_001075137  65 PSTMTVNsIVtp---vMTYGPLESMANNWHYQLQEQEKHYFYQANQFNLWNQALIESGNEIALLYNEVERVKIDQSRLEQ 141
EHH61123      57 lvpytST-VSvvatpvMTYGHLEGLINEWNLELEDQEKYFLLQATQVNAWDRTLIENGEMISILHGEVNKVKLDQKRLEQ 135
CAY05447     478 AVATPSL---------LRGKSMDEILNRWSVSLDSSIKEFSRQAAEVAAWDKVLLKGGDEISALVSALGAAEEKQAGIER 548
Q5B4N1       468 QLASVEGQQDELSSWLDRYEREVDEMM-SKQVGPGEslq--gpDQE 510 Aspergillus nidulans
EDO18242     665 SLQYIERQQDELETFLNNYEKKTETLL-SEILSANS-------GSA 702
Q6FPU8       739 SLQYIERQQEELETFLDNYESRTEALL-SDILPSNS-------GVP 776 [Candida] glabrata
Q2HEA0       472 QLSNVESQQDELGAWLDRYEADLNELF-AKGPGAGGavseqaaGPD 516 Chaetomium globosum CBS 148.51
Q7SEK6       520 QLSGVESQQDELTAWLDQYEAQLEELF-KKQQLGSG-------GES 557 Neurospora crassa
Q0U9D0       541 QLTMMEENQQELDSYLDRYEKEIENLMkMHGVSGKS-------DGL 579 Parastagonospora nodorum SN15
XP_001629560 361 ELNFISAQQRELEDLLKPLEDELKKNSvGTSQLQHA-------DRE 399
NP_001075137 142 ELDIILFQQKELEQMLTPIEELLKEQN-GPLNMMYV-------NKE 179
EHH61123     136 ELDFILSEQQELEFLLTYLEEATSNQS-GLHYLQDA-------DEE 173
CAY05447     549 TLDYLESSQSDLTSLVTDYEAQIESLL-PGLTSQINlt---saDVE 590
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