6XT9


Conserved Protein Domain Family
BBS1

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pfam14779: BBS1 
Ciliary BBSome complex subunit 1
The BBSome (so-named after the association with Bardet-Biedl syndrome) is a complex of 8 subunits that lies at the base of the flagellar microtubule structure. The precise function of the all the individual components in cilia formation is unclear, however they function to promote loading of cargo to the ciliary axoneme. The primary cilium, a slim microtubule-based organelle that projects from the surface of vertebrate cells has crucial roles in vertebrate development and human genetic diseases. Cilia are required for the response to developmental signals, and evidence is accumulating that the primary cilium is specialized for Hedgehog (Hh) signal transduction. Formation of cilia, in turn, is regulated by other signalling pathways, possibly including the planar cell polarity pathway. The connections between cilia and developmental signalling have begun to clarify the basis of human diseases associated with ciliary dysfunction. BBS1 predominantly localizes to the basal body and or transitional zone of ciliated cells. It has been found in a heptameric complex with BBS2, BBS5, BBS7, BBS8, and BBS9, termed the BBSome. Mutations in BBS1 can lead to retinal inadequacy.
Statistics
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PSSM-Id: 464312
Aligned: 38 rows
Threshold Bit Score: 225.554
Created: 25-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
6XT9_A        23 WLDAHYDPMANIHTFSACLALADLHGDGEYKLVVGDLGpgg------------------qqPRLKVLKGPLVMTESPLPA 84 
EGD72418      49 WQKVVDDPIADMDCTSSCITFADVNNQGENKVIVANMQfae------------------gkSKLQVLNCGELQQSIHLFG 110
CBJ27022      24 WLAAWHDPVAGLTCNGGCMQFMDLSRNGDYKIVVACRA-----------------------MSLKVYQGTSIFAEHPLLD 80 
XP_008208804  11 WLDAIWEPNTRMYTLPNGIDMLDVTGDGDARLIIADLGsst-----------------lddTKLRVFKGADQATEHAMTD 73 
XP_011136289  19 WLEALWEPSAGLFALPGGLDMLDVSGDGDARFICADLGpvg-----------------sdsTKVRVYKGGDQVTEHNMVD 81 
EAX92947      10 WTIAFSDKTTGIAAVPQCLSSGDIFGDGNCRILIATLD-----------------------QKLICFDGARMTHNITIPD 66 
Q22BU8        15 WLNGYRDPVAKINAFNNNMDLIPLTRDGENRLIVGDFAt----------------------NKILGYKGINVEFQIEVNE 72  Tetrahymena the...
Q3SE77         6 WIQGWSDLVANLKVTQNCMDLIDVQGNGQYNLVVADQN-----------------------QRLVSYRNTNIAWETRLTD 62  Paramecium tetr...
XP_016660355  26 WIDVDINPPINLQTYNCCMMLSDVHGDNDNKFVVVDFGsgt------------------ssPQLKIFKGLKQTHVIYLNE 87 
ESO04536      15 WIDGFYDPTTRIQTMSQCMVLSDIYKDDDFKLVLADFGdffssnpavvnnigaldgrkndkVKLKVFKGLAMINEVCIND 94 
6XT9_A        85 LPAAAATFL-MEQ----HEPRTPALALASGPCVYVYKNLRPYFKFSLPQLPP-NPLEQDLWNQAK-EDR-IDPLTLKEML 156
EGD72418     111 FPCGTISFRtSDE------ASAPAIAVASGNALYVFKNLKPFYKFILPDLPL-DEQELETWVGVRrAER-VDADVLQNAL 182
CBJ27022      81 EPSGLCAFYgVEDntntAGGERPAVAVAAGPYIFIYKNLRPYFKFTAPLVEP-SDEELEIWTRYR-KGE-VDADTLKALL 157
XP_008208804  74 VPCSVVGFY-TEN----GEKKSAALAIGAGSSVFIYKNMRPHFKFCLPQLSA-HPREQDIWYKAGlDEE-LNILSLADDL 146
XP_011136289  82 PPCGIVGFY-TEN----GEPRSSVVAVGAGASVYVFKNMRPFFKYCLPHIDA-HPKEREIWHKCGlDEE-LNVLTLADDL 154
EAX92947      67 MPSSICVHYnTSS------SSLPLVAVGAGNNILFFLNLRQFSKFTLP-LPFkSPEEEAIYQHIQaQTEgYTLEQAQLEL 139
Q22BU8        73 QIIAVSSFYpEQS----QFSGIPCLCFAVDGYIFIYQNNQPRYKFPLPKIEI-HPKELEVWQQFQeGSK-EVQLKMIDQW 146 Tetrahymena the...
Q3SE77        63 KPVCMTYFY-GDT------SGQPCISICHGNTIYNYKIFKAFYKCQIPNIQL-KQEEADIWKQYStDKN---LQNLIRDL 131 Paramecium tetr...
XP_016660355  88 KPSAITTVY-TDN----SEQHIPCVAVVIKNEIYFYRNCKPYHKYSIQSTTIrDTEECKLWQESE------DAFDLLKRL 156
ESO04536      95 IPSSIVTIA-VDT----LVPSIPALAISSSCYVYIYKNMKPYFRFTLPCSPL-CPEEEKAWRDYQ-NEH-IKLSELVVAL 166
6XT9_A       157 ESIRet-aEEPLSIQSLRFLQLEL-Se------MEAFV-NQHKSNSIKRQTVI---TTMTTLKKNLADED-------AVS 217
EGD72418     183 LTLRg--nGVKLSPRSLKFLSLPPeM-------REDFV-NMVKTQPATTPAVI---TTVGTLAKLGGDDT-------GVA 242
CBJ27022     158 AKATe--dGVRLGPLSTDFLAPDLeD-------RGSFLsARGASEPLSRTTII---TCLATMNRAREEEG-------SPV 218
XP_008208804 147 EVLQkeigAAYLTSRTLKFLSLESeA-------RRSFA-EQYRRLPLVKTNAI---SIVGAIRKDSWNDI-------ACS 208
XP_011136289 155 ELLLkelgAAFLSPRTLKFLSMDSnL-------RLSFA-EQYRRVPLIKPNAL---TAIAIIRRDSWNDP-------ASS 216
EAX92947     140 TQLKd--rNVSLSTTSLSFIAADLkQtmvmnryKELFS-------DITSLDCI---TAMASIKNNALEDD-------KST 200
Q22BU8       147 NKLRne-qNISLSSKALDVLIQTKaIk------QQELI-KQFLSGGIDMLNLVdtpTCLTKINTYQEGDS-------AIS 211 Tetrahymena the...
Q3SE77       132 KNLQq--qHSNLSYKSLELLCFQDlQk------QQELA-EKYQDSPYIEDSV----TCVSVLKKNVDEDK-------SQG 191 Paramecium tetr...
XP_016660355 157 QVLSstigFVSLSTTSQQMLCLNEcH-------VNEYF-EKCRKTNLVKQHTI---TCVTELKRNMSDVH-------GVS 218
ESO04536     167 DNIRgfgrLNEMTQKSVKFLQLSTnEe------RLNFI-DQYKEVPLVKNTAI---TIMTSLMKNVHDDDgdggaggGIR 236
6XT9_A       218 CLVLGTENKELLVLDPEAFTIL-AKMSLP--SVPVFLEVSGQFDVEFRLAAACRNGNIYILR 276
EGD72418     243 CPVLGTEDGQVFVLNPTNFAAV-VRVSLP--GPVACMTASGALDTDYRIHACTRDGTVCHIK 301
CBJ27022     219 CLLAGTEDGQIVFLDPPC-KVL-TTAQLPrgAVPAFLAVGGLFDSDWRLAVACRNGRIYTVK 278
XP_008208804 209 YLIVGTEFGEILIVDHRAFFVV-EKYTIG--WPVVALTTSGLWMGDGQIVVTGRDGRIGAIK 267
XP_011136289 217 CLILGTEAGETLILDPRAFLVM-DKHQLE--WPPVAFASCGLWTGDGRIIVIGRDGKIGAIR 275
EAX92947     201 RLLVGTESRCLLLLDSKDLKVD-KKWEFD--SPPSAIIANGYMTGSSVIVVVCRDRIVKVIS 259
Q22BU8       212 QLVIGTENKKLYILDSAGMQIQ-KTYEIA--SAPTSIICTGILQGDNRIIITTRDNQIQFIR 270 Tetrahymena thermophila SB210
Q3SE77       192 QLIVGTELKFIYIYNQEITQIY-KKYEIP--GVPISICIFSEEQKDGRIAVLVRENCVYFIG 250 Paramecium tetraurelia
XP_016660355 219 CLVIAT-TDMISILDTESFKILpDKYELQ--GETAYMSATGLYDVDYKILVATRTGRLYIFS 277
ESO04536     237 CIVIGCEDGHVYVINPETFSVA-ATYSLP--SVAVFMVANGLFDVEYSIYTACRNGGVYGIK 295
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