1R3N,2IMO,1Z2L,2V8G,5I4M,4WJB,3N5F,4PXD,1R3N,4PXB,2V8D


Conserved Protein Domain Family
M20_bAS

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cd03884: M20_bAS 
Click on image for an interactive view with Cn3D
M20 Peptidase beta-alanine synthase, an amidohydrolase
Peptidase M20 family, beta-alanine synthase (bAS; N-carbamoyl-beta-alanine amidohydrolase and beta-ureidopropionase; EC 3.5.1.6) subfamily. bAS is an amidohydrolase and is the final enzyme in the pyrimidine catabolic pathway, which is involved in the regulation of the cellular pyrimidine pool. bAS catalyzes the irreversible hydrolysis of the N-carbamylated beta-amino acids to beta-alanine or aminoisobutyrate with the release of carbon dioxide and ammonia. Also included in this subfamily is allantoate amidohydrolase (allantoate deiminase), which catalyzes the conversion of allantoate to (S)-ureidoglycolate, one of the crucial alternate steps in purine metabolism. It is possible that these two enzymes arose from the same ancestral peptidase that evolved into two structurally related enzymes with distinct catalytic properties and biochemical roles within the cell. Downstream enzyme (S)-ureidoglycolate amidohydrolase (UAH) is homologous in structure and sequence with AAH and catalyzes the conversion of (S)-ureidoglycolate into glyoxylate, releasing two molecules of ammonia as by-products. Yeast requires beta-alanine as a precursor of pantothenate and coenzyme A biosynthesis, but generates it mostly via degradation of spermine. Disorders in pyrimidine degradation and beta-alanine metabolism caused by beta-ureidopropionase deficiency (UPB1 gene) in humans are normally associated with neurological disorders.
Statistics
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PSSM-Id: 349880
Aligned: 78 rows
Threshold Bit Score: 377.249
Created: 16-Jun-2005
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 6 residues -Click on image for an interactive view with Cn3D
Feature 1: metal binding site [ion binding site], 6 residue positions
Conserved feature residue pattern:H D E E H HClick to see conserved feature residue pattern help
Evidence:
  • Structure:2V8G: Saccharomyces kluyveri Beta-alanine synthase bound to two zinc(II) ions.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                     
1R3N_H     34 LNQTILETgSQFGGvarwgqeshefGMRRLAGTAlDGAMRDWFTNECESLGC-KVKVDkIGNMFAVYPGkng-gkPTATG 111 Saccharomyces kluy...
2V8G_A     34 LNQTILETgSQFGGvarwgqeshefGMRRLAGTAlDGAMRDWFTNECESLGC-KVKVDkIGNMFAVYPGkng-gkPTATG 111 Lachancea kluyveri
ABR89911  185 VMDWAEDI-AAWSEde--------gALTCTYMSDaHRRTANQISDWMRTAGM-HVHIDaVGNVVGRYLAtdprakTLITG 254 Janthinobacterium ...
ADV00830  183 VWDWQEKL-SVHTDpgya----elgQLTVTYLTDaHRACAQRISHWMRDCGFdEVEIDaVGNVVGRYRPaaesgkYLMTG 257 Alicycliphilus den...
BAI76499   22 LLDRIDAL-AAISAee--------gRLSRLYLTPeHRRANDLVAGWMREAGM-SVREDaVGNIIGRYEGerpglpALLIG 91  Azospirillum sp. B510
CAG76388   18 IMSRCDVL-AEISEtp--------gQLTRVYLSLeHLRANMQVGEWMREAGM-NVWQDsVGNICGRYDGltpdapALLLG 87  Erwinia carotovora...
CAB79007   96 AVARLHEL-GQVSDaa--------tHLERTFMSPaSIRAIPLIRGWMEDAGL-STWVDyMGNVHGRVEPkngssqALLIG 165 thale cress
EDQ83593   11 VAARLKEL-GNVSDsr--------hVLERTFLSPaALAAGRLLASWMRDAGL-RTWEDeLGNVHGRSDGanatapALLLG 80  Physcomitrella pat...
AAV95806    8 AQALLKDL-AACSEag--------pGVTRLPFTPeHRAACDLLWTHMEATGL-TVTLDdAGTLVGRYEGppd-skTLLMG 76  Silicibacter pomer...
AAV31631    6 ITAMLNDI-ASCSEsa--------rGVTRLPFSQeHRFAVNKITRWMKDTGL-SVHMDaSGTLIGRLEGpdn-spTLLFG 74  uncultured alpha p...
Feature 1      #          #                                   ##                              
1R3N_H    112 SHLDTQPEAGKYDGILGVLAGLEVLRTFKDnnyv--pnyDVCVVVWFNEEGaRFARSCtGSSVWSHDLSleeayglmsvg 189 Saccharomyces kluy...
2V8G_A    112 SHLDTQPEAGKYDGILGVLAGLEVLRTFKDnnyv--pnyDVCVVVWFNEEGaRFARSCtGSSVWSHDLSleeayglmsvg 189 Lachancea kluyveri
ABR89911  255 SHYDTVRNGGKYDGREGILLAIAVVKHLHErget--lpfHFEVIAFAEEEGvRFKSTFlGSNAVIGQFNmelld----it 328 Janthinobacterium ...
ADV00830  258 SHYDTVRNGGKYDGRLGIFVPMACVRELHRqhrr--lpfGIEVVAFAEEEGqRYKATFlGSGALIGDFKqewld----qk 331 Alicycliphilus den...
BAI76499   92 SHLDTVRDAGRYDGMLGVLSGIAVVADLNArgrr--lpfAVEVIGFGDEEGtRFQSTLiGSRAIAGTFDpavld----sr 165 Azospirillum sp. B510
CAG76388   88 SHLDTVRNAGRYDGMLGVLTAIEVVRTFHQqgir--lpvALEIVGFGDEEGtRFGITLlGSRGLTGTWPenwle----cq 161 Erwinia carotovora...
CAB79007  166 SHMDTVIDAGKYDGSLGIISAISALKVLKIdgrlgelkrPVEVIAFSDEEGvRFQSTFlGSAALAGIMPvsrle----vt 241 thale cress
EDQ83593   81 SHLDTVIDAGKYDGALGIVTAIAAVKVLKIegklqqfprPIEIIAFSDEEGiRFQTTFlGSSAIAGTFQpkhlk----nv 156 Physcomitrella pat...
AAV95806   77 SHQDSVREGGAYDGIMGVVLPLLALAKLRAeavh--lpfSVEVLAFADEEGvRFPTALvGSRALAGTFDpavls----mq 150 Silicibacter pomer...
AAV31631   75 SHQDSVRHGGKYDGIMGVLLPILALQKIGQqtl----pfSVQVMAFADEEGvRFPTALiGPRALAGNFDnsvln----fk 146 uncultured alpha p...
Feature 1                                            #                                        
1R3N_H    190 edkPESVYDSLKNIGYigdtpas----ykeneidAHFELHIEQGPILEDENKAIGIVTGVQAYNWQKVTVHGVGAHAGTT 265 Saccharomyces kluy...
2V8G_A    190 edkPESVYDSLKNIGYigdtpas----ykeneidAHFELHIEQGPILEDENKAIGIVTGVQAYNWQKVTVHGVGAHAGTT 265 Lachancea kluyveri
ABR89911  329 drdGISMREAITQAGHdvnaipqi--arnpadvlGYVEVHIEQGPVLLQRDLPVGIVTSIAGSSRYQVEFRGVASHSGTT 406 Janthinobacterium ...
ADV00830  332 dadGITMREAMEHAGLciadiprl--rrdaaqylGFVEVHIEQGPVLNELDIPLGVVTSINGGVRYVCEMTGMASHAGTT 409 Alicycliphilus den...
BAI76499  166 daaGTRLADAMTAFGLdpaawata--ahkpdevlAYAELHIEQGPVLEALGRPVGIVTAIAGATRLAVTVDGMAGHAGTV 243 Azospirillum sp. B510
CAG76388  162 daeGTSVAQALTIAGLdplqvaqa--arpvsdivAYLELHIEQGPCLEQQELALGVVTAINGARRLNCTFLGLAGHAGTV 239 Erwinia carotovora...
CAB79007  242 dksGISVQDALKENSIditdenlmqlkydpasvwGYVEVHIEQGPVLEWVGYPLGVVKGIAGQTRLKVTVKGSQGHAGTV 321 thale cress
EDQ83593  157 darGISIGAALRAASHlgtleslstmkyeptsvwGYVELHIEQGPVLEAHGLPLGVVEAIAGQTRLAVRVEGSQGHAGTV 236 Physcomitrella pat...
AAV95806  151 darGVTLHDAMTSFGLnpdrigal--rrdpadviGFVETHIEQGPVLEQAAQAIGVVTAICGIERHQIVVTGETGHAGTL 228 Silicibacter pomer...
AAV31631  147 dhdGVSVRNAMIGFGLnpdeitsl--dirntpiiGYVETHIEQGPILDDKNLPLGIVTAIAGIERHQIELKGLSGHAGTT 224 uncultured alpha p...
Feature 1                                                                                     
1R3N_H    266 PWrlRKDALLMSSKMIVAASEIAQrh---------------------ngLFTCGIIDAKPYSvNIIPGEVSFTLDFRHps 324 Saccharomyces kluy...
2V8G_A    266 PWrlRKDALLMSSKMIVAASEIAQrh---------------------ngLFTCGIIDAKPYSvNIIPGEVSFTLDFRHps 324 Lachancea kluyveri
ABR89911  407 PMsmRKDAAAAAAEIILYVEQRCAqdqh------------------aslVGTVGQLQVPSGStNVIPGRCVFSLDIRAav 468 Janthinobacterium ...
ADV00830  410 PMdrRRDAALGVAELALYMEQRAAqdg--------------------dsVATIGMLQVPNGSiNVVPGRCQFSMDMRApt 469 Alicycliphilus den...
BAI76499  244 PMtlRRDALAASAEMILAVEQLCSgqe--------------------rlVGTVGRIEASPGAtNVIPGKVRFTIDLRAdr 303 Azospirillum sp. B510
CAG76388  240 PMtqRQDALAAAADWMAQAERVTResd-------------------phlVATFGTLQCLPGAaNVIPGEVKMTLDIRGpe 300 Erwinia carotovora...
CAB79007  322 PMsmRQDPMTGAAELIVLLESVCKnpkdylscnvqc-nedtveslanslVCTVGEISTWPSAsNVIPGQVTFTVDLRTid 400 thale cress
EDQ83593  237 PMsmRKDPMIAAAQSIVAIENICThpekgvggsrgatamstavnhagaiVCTVGEIHSWPGAsNVIPGEVMFTIDVRSkd 316 Physcomitrella pat...
AAV95806  229 PMsgRRDALVAAAAIVTEVDRLGQtip--------------------dlRATVGALSVEPNVvNAVPRRVTLTAEFRSpd 288 Silicibacter pomer...
AAV31631  225 PMyaRQDAFACAAELVLIAERVANdts--------------------dlIATIGKINVSPNAvNVIPGEASMVLEIRSav 284 uncultured alpha p...
Feature 1                                                                                     
1R3N_H    325 ddVLATMLKEAAAEFDrlikindggaLSYESETlqVSPAVNfheVCIECVSRSAFaqfk---------------kdqvRQ 389 Saccharomyces kluy...
2V8G_A    325 ddVLATMLKEAAAEFDrlikindggaLSYESETlqVSPAVNfheVCIECVSRSAFaqfk---------------kdqvRQ 389 Lachancea kluyveri
ABR89911  469 dsIREAAVADILQHIAdvca---rrnIEYKAELsvSAPAAPcapWLMKQLSAATErag-----------------vrpFE 528 Janthinobacterium ...
ADV00830  470 dpQRDAMVADVLARLEeiaq---rrgLQYKAELsmKAAAAPsapEWQQRWEAAVQalg-----------------vplYR 529 Alicycliphilus den...
BAI76499  304 dpLRLERVGAVRARLEaiad---argVAIGFETlhESPAVAchpALMAQFAAAAAaeg-----------------ldaPE 363 Azospirillum sp. B510
CAG76388  301 daPLDALLQKLLTLAQaiah---qrgCQFSAEEyyRIAATRcdpALQSALNEAVAqvq-----------------gktLM 360 Erwinia carotovora...
CAB79007  401 dvGRKAILHDLSTRMYqicd---krsLLCSIERkhDADAVMsdpQLSLQLKSAAQsalkkmt---------gevqdevPV 468 thale cress
EDQ83593  317 dsNRETNVVRIESEIRkicr---krgVGCVIERkhEANAIGcapGLSDRLNAAAFtamrelppfrnnftaledggftaPT 393 Physcomitrella pat...
AAV95806  289 daTRRNTGAMLHRYAQelaa---qkqLKIKAERtySQVAQPsdgALSAQLLQAARqae-----------------ehgPL 348 Silicibacter pomer...
AAV31631  285 dkTRIENSKIIIDEMRdaas---krsIDFTCNRtyVQAAVPcdkRLRSVLKKAASiqk-----------------ldpIC 344 uncultured alpha p...
Feature 1                                    #                       
1R3N_H    390 IWSGAGHDSCQTAPHvPTSMIFIPSk-dGLSHNYYEYSSPEEIENGFKVLLQAII 443 Saccharomyces kluyveri
2V8G_A    390 IWSGAGHDSCQTAPHvPTSMIFIPSk-dGLSHNYYEYSSPEEIENGFKVLLQAII 443 Lachancea kluyveri
ABR89911  529 LASGAGHDAMTIAKMtDVAMLFTRCgngGISHNPLETMTADDTEVSAQILLDFLR 583 Janthinobacterium sp. Marseille
ADV00830  530 MPSGAGHDAMKLHEVmPQAMLFVRGlngGISHNPLESSTADDMQLAVDAFAHVLN 584 Alicycliphilus denitrificans BC
BAI76499  364 LPSGAGHDAMAVAALtGIAMLFVRCe-rGISHNPAERITAADAEAGVRVLARFVE 417 Azospirillum sp. B510
CAG76388  361 LPSGAGHDAIAIAERwPVAMLFVRCr-gGISHHPDESVITEDVALALQALYQMVF 414 Erwinia carotovora subsp. atroseptica SCRI1043
CAB79007  469 LMSGAGHDAMAMAHLtKVGMLFVRCr-gGISHSPAEHVLDDDVGAAGLAILEFLE 522 thale cress
EDQ83593  394 LVSGAGHDAMAMASLtQVGMLFLRCt-gGVSHSPAEHVQDDDIWAGSLALLRFME 447 Physcomitrella patens subsp. patens
AAV95806  349 LPSGATHDASAMADLcPIAMLFVRCr-dGVSHKPEEFASADDMGSAIAALAAFLR 402 Silicibacter pomeroyi DSS-3
AAV31631  345 LTSGATHDASAMSDLcPMAMLFVRCh-kGISHTPEEYARETDMQAAVDCLVEFMN 398 uncultured alpha proteobacterium EBAC2C11

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