Conserved Protein Domain Family
F-box_FBXO39

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cd22108: F-box_FBXO39 
F-box domain found in F-box only protein 39 (FBXO39) and similar proteins
FBXO39, also called FBX39, likely functions as the substrate-recognition component of an SCF (SKP1-CUL1-F-box protein)-type E3 ubiquitin ligase complex. It acts as a cancer/testis antigen from colon cancer patients by serological analysis of recombinant cDNA expression libraries (SEREX). The F-box domain has a role in mediating protein-protein interactions in a variety of contexts, such as polyubiquitination, transcription elongation, centromere binding and translational repression.
Statistics
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PSSM-Id: 438880
Aligned: 7 rows
Threshold Bit Score: 82.4659
Created: 1-Feb-2019
Updated: 17-Oct-2022
Structure
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Aligned Rows:
 
putative Skp1
Feature 1:putative Skp1 binding site [polypeptide binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1           #   #  ##  ##   # ##   ### #             
Q8N4B4        16 WAFLPDLCLCRVFWWLgDRDRSRAAlVCRKWNQMMYsAELWRYR 59  human
XP_014346616  13 WANLPEISLARVFWWLgDRDRAHAAlVCRHWNQVMMsPALWKCR 56  coelacanth
OXB59621      12 WANLPDVCLRHVFHWLdDKNRSQAAlVCKRWNQALYsGSLWRTR 55  scaled quail
XP_007902517  14 WSELPEVSLRQVFRWLgDQDRVRAAmVCKCWYHVMHsPALWRSR 57  elephant shark
XP_029468689  13 WASLPTVCLSHMFSYLgDRDRSNAAqVSKSWNLAMYsAALWQTR 56  two-lined caecilian
RXM94302      21 WAYLPDVCLRRVFRFLpDRDRARAAlVCRHWNRIMYsPDLWRFR 64  sterlet
XP_010769613  31 WAILPVLCLTHVFKFLdEGDRRSSDlVCQRWHNTMHsPSLWRSH 74  black rockcod

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